data_5SWR # _model_server_result.job_id 6vxgdD2iTz6y4R6BGZd3Iw _model_server_result.datetime_utc '2024-11-23 12:36:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5swr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 5SWR # _exptl.entry_id 5SWR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 162.185 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-hydroxy-3,4-dihydronaphthalen-1(2H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SWR _cell.length_a 114.236 _cell.length_b 116.331 _cell.length_c 149.299 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SWR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 34 A SER 6 1_555 A N SEP 35 A SEP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale2 A C SEP 35 A SEP 7 1_555 A N GLY 36 A GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A C MET 817 A MET 789 1_555 A N SEP 818 A SEP 790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.343 ? covale ? covale4 A C SEP 818 A SEP 790 1_555 A N GLU 819 A GLU 791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C10 H10 O2' _chem_comp.formula_weight 162.185 _chem_comp.id 718 _chem_comp.mon_nstd_flag . _chem_comp.name 6-hydroxy-3,4-dihydronaphthalen-1(2H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C3 718 sing 1 n n C7 C8 718 sing 2 n n C2 C3 718 doub 3 n y C2 C1 718 sing 4 n y O1 C1 718 sing 5 n n C3 C4 718 sing 6 n y C1 C6 718 doub 7 n y C8 C9 718 sing 8 n n C9 C10 718 sing 9 n n C4 C10 718 sing 10 n n C4 C5 718 doub 11 n y C6 C5 718 sing 12 n y C10 O11 718 doub 13 n n C5 H1 718 sing 14 n n C6 H2 718 sing 15 n n C7 H3 718 sing 16 n n C7 H4 718 sing 17 n n C8 H5 718 sing 18 n n C8 H6 718 sing 19 n n C9 H7 718 sing 20 n n C9 H8 718 sing 21 n n C2 H9 718 sing 22 n n O1 H10 718 sing 23 n n # _atom_sites.entry_id 5SWR _atom_sites.fract_transf_matrix[1][1] 0.008754 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008596 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 718 A 1 1101 1 718 4F1 . D 4 CL A 1 1102 1 CL CL . E 4 CL A 1 1103 2 CL CL . F 5 SAL B 1 701 1 SAL 4E1 . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 718 . . . C 3 76.484 84.175 106.303 1 163.11 ? C4 718 1101 A 1 HETATM 2 C C5 718 . . . C 3 75.289 83.765 106.916 1 154.05 ? C5 718 1101 A 1 HETATM 3 C C6 718 . . . C 3 74.065 84.249 106.463 1 153.44 ? C6 718 1101 A 1 HETATM 4 C C7 718 . . . C 3 77.732 85.541 104.552 1 157.43 ? C7 718 1101 A 1 HETATM 5 C C8 718 . . . C 3 78.9 85.561 105.543 1 159.27 ? C8 718 1101 A 1 HETATM 6 C C10 718 . . . C 3 77.808 83.649 106.805 1 162.75 ? C10 718 1101 A 1 HETATM 7 C C9 718 . . . C 3 79.104 84.199 106.222 1 163.03 ? C9 718 1101 A 1 HETATM 8 C C3 718 . . . C 3 76.451 85.08 105.23 1 162.62 ? C3 718 1101 A 1 HETATM 9 C C2 718 . . . C 3 75.219 85.562 104.779 1 160.82 ? C2 718 1101 A 1 HETATM 10 C C1 718 . . . C 3 74.029 85.146 105.397 1 161.65 ? C1 718 1101 A 1 HETATM 11 O O1 718 . . . C 3 72.82 85.605 104.972 1 160.41 ? O1 718 1101 A 1 HETATM 12 O O11 718 . . . C 3 77.835 82.786 107.682 1 135.81 ? O11 718 1101 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #