data_5SXG # _model_server_result.job_id oneDQgEyfMseWzdieomgeA _model_server_result.datetime_utc '2024-11-23 05:41:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sxg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 5SXG # _exptl.entry_id 5SXG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.86 _cell.angle_gamma 90 _cell.entry_id 5SXG _cell.length_a 44.39 _cell.length_b 50.8 _cell.length_c 76.89 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SXG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,L 1 1 B,G,H,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 60 A HIS 253 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.08 ? metalc ? metalc2 A SG CYS 91 A CYS 284 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.264 ? metalc ? metalc3 A SG CYS 96 A CYS 289 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc4 C ZN ZN . A ZN 401 1_555 L O HOH . A HOH 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? metalc ? metalc5 B ND1 HIS 60 B HIS 253 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc6 B SG CYS 91 B CYS 284 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc7 B SG CYS 96 B CYS 289 1_555 G ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? metalc ? metalc8 G ZN ZN . B ZN 401 1_555 M O HOH . B HOH 509 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.244 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SXG _atom_sites.fract_transf_matrix[1][1] 0.022528 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005143 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 401 379 ZN ZN . D 3 PDO A 1 402 380 PDO DRG . E 4 IMD A 1 403 382 IMD IMD . F 3 PDO A 1 404 382 PDO DRG . G 2 ZN B 1 401 379 ZN ZN . H 3 PDO B 1 402 380 PDO DRG . I 3 PDO B 1 403 381 PDO DRG . J 3 PDO B 1 404 382 PDO DRG . K 3 PDO B 1 405 383 PDO DRG . L 5 HOH A 1 501 453 HOH HOH . L 5 HOH A 2 502 514 HOH HOH . L 5 HOH A 3 503 391 HOH HOH . L 5 HOH A 4 504 503 HOH HOH . L 5 HOH A 5 505 464 HOH HOH . L 5 HOH A 6 506 449 HOH HOH . L 5 HOH A 7 507 413 HOH HOH . L 5 HOH A 8 508 529 HOH HOH . L 5 HOH A 9 509 520 HOH HOH . L 5 HOH A 10 510 2 HOH HOH . L 5 HOH A 11 511 397 HOH HOH . L 5 HOH A 12 512 434 HOH HOH . L 5 HOH A 13 513 444 HOH HOH . L 5 HOH A 14 514 472 HOH HOH . L 5 HOH A 15 515 502 HOH HOH . L 5 HOH A 16 516 505 HOH HOH . L 5 HOH A 17 517 404 HOH HOH . L 5 HOH A 18 518 510 HOH HOH . L 5 HOH A 19 519 419 HOH HOH . L 5 HOH A 20 520 485 HOH HOH . L 5 HOH A 21 521 465 HOH HOH . L 5 HOH A 22 522 478 HOH HOH . L 5 HOH A 23 523 388 HOH HOH . L 5 HOH A 24 524 386 HOH HOH . L 5 HOH A 25 525 493 HOH HOH . L 5 HOH A 26 526 406 HOH HOH . L 5 HOH A 27 527 460 HOH HOH . L 5 HOH A 28 528 385 HOH HOH . L 5 HOH A 29 529 438 HOH HOH . L 5 HOH A 30 530 398 HOH HOH . L 5 HOH A 31 531 518 HOH HOH . L 5 HOH A 32 532 399 HOH HOH . L 5 HOH A 33 533 433 HOH HOH . L 5 HOH A 34 534 407 HOH HOH . L 5 HOH A 35 535 408 HOH HOH . L 5 HOH A 36 536 486 HOH HOH . L 5 HOH A 37 537 446 HOH HOH . L 5 HOH A 38 538 411 HOH HOH . L 5 HOH A 39 539 393 HOH HOH . L 5 HOH A 40 540 428 HOH HOH . L 5 HOH A 41 541 461 HOH HOH . L 5 HOH A 42 542 490 HOH HOH . L 5 HOH A 43 543 425 HOH HOH . L 5 HOH A 44 544 387 HOH HOH . L 5 HOH A 45 545 451 HOH HOH . L 5 HOH A 46 546 415 HOH HOH . L 5 HOH A 47 547 401 HOH HOH . L 5 HOH A 48 548 403 HOH HOH . L 5 HOH A 49 549 418 HOH HOH . L 5 HOH A 50 550 484 HOH HOH . L 5 HOH A 51 551 384 HOH HOH . L 5 HOH A 52 552 424 HOH HOH . L 5 HOH A 53 553 441 HOH HOH . L 5 HOH A 54 554 409 HOH HOH . L 5 HOH A 55 555 501 HOH HOH . L 5 HOH A 56 556 435 HOH HOH . L 5 HOH A 57 557 416 HOH HOH . L 5 HOH A 58 558 410 HOH HOH . L 5 HOH A 59 559 405 HOH HOH . L 5 HOH A 60 560 459 HOH HOH . L 5 HOH A 61 561 436 HOH HOH . L 5 HOH A 62 562 402 HOH HOH . L 5 HOH A 63 563 383 HOH HOH . L 5 HOH A 64 564 8 HOH HOH . L 5 HOH A 65 565 392 HOH HOH . L 5 HOH A 66 566 420 HOH HOH . L 5 HOH A 67 567 396 HOH HOH . L 5 HOH A 68 568 483 HOH HOH . L 5 HOH A 69 569 417 HOH HOH . L 5 HOH A 70 570 522 HOH HOH . L 5 HOH A 71 571 427 HOH HOH . L 5 HOH A 72 572 491 HOH HOH . L 5 HOH A 73 573 421 HOH HOH . L 5 HOH A 74 574 481 HOH HOH . L 5 HOH A 75 575 498 HOH HOH . L 5 HOH A 76 576 456 HOH HOH . L 5 HOH A 77 577 395 HOH HOH . L 5 HOH A 78 578 495 HOH HOH . L 5 HOH A 79 579 394 HOH HOH . L 5 HOH A 80 580 422 HOH HOH . L 5 HOH A 81 581 500 HOH HOH . L 5 HOH A 82 582 426 HOH HOH . L 5 HOH A 83 583 488 HOH HOH . L 5 HOH A 84 584 462 HOH HOH . L 5 HOH A 85 585 477 HOH HOH . L 5 HOH A 86 586 463 HOH HOH . L 5 HOH A 87 587 494 HOH HOH . L 5 HOH A 88 588 432 HOH HOH . L 5 HOH A 89 589 492 HOH HOH . L 5 HOH A 90 590 442 HOH HOH . L 5 HOH A 91 591 400 HOH HOH . L 5 HOH A 92 592 504 HOH HOH . L 5 HOH A 93 593 467 HOH HOH . L 5 HOH A 94 594 474 HOH HOH . L 5 HOH A 95 595 431 HOH HOH . L 5 HOH A 96 596 476 HOH HOH . L 5 HOH A 97 597 423 HOH HOH . L 5 HOH A 98 598 509 HOH HOH . L 5 HOH A 99 599 479 HOH HOH . L 5 HOH A 100 600 437 HOH HOH . L 5 HOH A 101 601 412 HOH HOH . L 5 HOH A 102 602 390 HOH HOH . L 5 HOH A 103 603 429 HOH HOH . L 5 HOH A 104 604 450 HOH HOH . L 5 HOH A 105 605 525 HOH HOH . L 5 HOH A 106 606 445 HOH HOH . L 5 HOH A 107 607 452 HOH HOH . L 5 HOH A 108 608 498 HOH HOH . L 5 HOH A 109 609 496 HOH HOH . L 5 HOH A 110 610 513 HOH HOH . L 5 HOH A 111 611 475 HOH HOH . L 5 HOH A 112 612 466 HOH HOH . L 5 HOH A 113 613 480 HOH HOH . L 5 HOH A 114 614 499 HOH HOH . L 5 HOH A 115 615 508 HOH HOH . L 5 HOH A 116 616 516 HOH HOH . L 5 HOH A 117 617 440 HOH HOH . L 5 HOH A 118 618 439 HOH HOH . L 5 HOH A 119 619 487 HOH HOH . L 5 HOH A 120 620 441 HOH HOH . L 5 HOH A 121 621 482 HOH HOH . L 5 HOH A 122 622 512 HOH HOH . L 5 HOH A 123 623 471 HOH HOH . L 5 HOH A 124 624 506 HOH HOH . L 5 HOH A 125 625 447 HOH HOH . L 5 HOH A 126 626 458 HOH HOH . L 5 HOH A 127 627 443 HOH HOH . L 5 HOH A 128 628 469 HOH HOH . L 5 HOH A 129 629 468 HOH HOH . L 5 HOH A 130 630 457 HOH HOH . L 5 HOH A 131 631 515 HOH HOH . L 5 HOH A 132 632 519 HOH HOH . L 5 HOH A 133 633 489 HOH HOH . L 5 HOH A 134 634 517 HOH HOH . L 5 HOH A 135 635 473 HOH HOH . L 5 HOH A 136 636 470 HOH HOH . L 5 HOH A 137 637 497 HOH HOH . L 5 HOH A 138 638 455 HOH HOH . L 5 HOH A 139 639 454 HOH HOH . L 5 HOH A 140 640 430 HOH HOH . L 5 HOH A 141 641 448 HOH HOH . L 5 HOH A 142 642 521 HOH HOH . L 5 HOH A 143 643 511 HOH HOH . M 5 HOH B 1 501 449 HOH HOH . M 5 HOH B 2 502 477 HOH HOH . M 5 HOH B 3 503 412 HOH HOH . M 5 HOH B 4 504 403 HOH HOH . M 5 HOH B 5 505 516 HOH HOH . M 5 HOH B 6 506 503 HOH HOH . M 5 HOH B 7 507 511 HOH HOH . M 5 HOH B 8 508 482 HOH HOH . M 5 HOH B 9 509 395 HOH HOH . M 5 HOH B 10 510 451 HOH HOH . M 5 HOH B 11 511 505 HOH HOH . M 5 HOH B 12 512 460 HOH HOH . M 5 HOH B 13 513 392 HOH HOH . M 5 HOH B 14 514 500 HOH HOH . M 5 HOH B 15 515 437 HOH HOH . M 5 HOH B 16 516 507 HOH HOH . M 5 HOH B 17 517 404 HOH HOH . M 5 HOH B 18 518 430 HOH HOH . M 5 HOH B 19 519 389 HOH HOH . M 5 HOH B 20 520 399 HOH HOH . M 5 HOH B 21 521 406 HOH HOH . M 5 HOH B 22 522 497 HOH HOH . M 5 HOH B 23 523 472 HOH HOH . M 5 HOH B 24 524 385 HOH HOH . M 5 HOH B 25 525 458 HOH HOH . M 5 HOH B 26 526 463 HOH HOH . M 5 HOH B 27 527 502 HOH HOH . M 5 HOH B 28 528 483 HOH HOH . M 5 HOH B 29 529 457 HOH HOH . M 5 HOH B 30 530 410 HOH HOH . M 5 HOH B 31 531 5 HOH HOH . M 5 HOH B 32 532 496 HOH HOH . M 5 HOH B 33 533 487 HOH HOH . M 5 HOH B 34 534 490 HOH HOH . M 5 HOH B 35 535 506 HOH HOH . M 5 HOH B 36 536 391 HOH HOH . M 5 HOH B 37 537 390 HOH HOH . M 5 HOH B 38 538 504 HOH HOH . M 5 HOH B 39 539 508 HOH HOH . M 5 HOH B 40 540 439 HOH HOH . M 5 HOH B 41 541 469 HOH HOH . M 5 HOH B 42 542 388 HOH HOH . M 5 HOH B 43 543 423 HOH HOH . M 5 HOH B 44 544 397 HOH HOH . M 5 HOH B 45 545 432 HOH HOH . M 5 HOH B 46 546 454 HOH HOH . M 5 HOH B 47 547 456 HOH HOH . M 5 HOH B 48 548 429 HOH HOH . M 5 HOH B 49 549 411 HOH HOH . M 5 HOH B 50 550 393 HOH HOH . M 5 HOH B 51 551 420 HOH HOH . M 5 HOH B 52 552 445 HOH HOH . M 5 HOH B 53 553 394 HOH HOH . M 5 HOH B 54 554 409 HOH HOH . M 5 HOH B 55 555 450 HOH HOH . M 5 HOH B 56 556 401 HOH HOH . M 5 HOH B 57 557 444 HOH HOH . M 5 HOH B 58 558 387 HOH HOH . M 5 HOH B 59 559 408 HOH HOH . M 5 HOH B 60 560 400 HOH HOH . M 5 HOH B 61 561 426 HOH HOH . M 5 HOH B 62 562 494 HOH HOH . M 5 HOH B 63 563 386 HOH HOH . M 5 HOH B 64 564 431 HOH HOH . M 5 HOH B 65 565 396 HOH HOH . M 5 HOH B 66 566 413 HOH HOH . M 5 HOH B 67 567 501 HOH HOH . M 5 HOH B 68 568 389 HOH HOH . M 5 HOH B 69 569 461 HOH HOH . M 5 HOH B 70 570 475 HOH HOH . M 5 HOH B 71 571 417 HOH HOH . M 5 HOH B 72 572 433 HOH HOH . M 5 HOH B 73 573 427 HOH HOH . M 5 HOH B 74 574 493 HOH HOH . M 5 HOH B 75 575 421 HOH HOH . M 5 HOH B 76 576 484 HOH HOH . M 5 HOH B 77 577 478 HOH HOH . M 5 HOH B 78 578 418 HOH HOH . M 5 HOH B 79 579 473 HOH HOH . M 5 HOH B 80 580 443 HOH HOH . M 5 HOH B 81 581 486 HOH HOH . M 5 HOH B 82 582 447 HOH HOH . M 5 HOH B 83 583 402 HOH HOH . M 5 HOH B 84 584 491 HOH HOH . M 5 HOH B 85 585 398 HOH HOH . M 5 HOH B 86 586 471 HOH HOH . M 5 HOH B 87 587 424 HOH HOH . M 5 HOH B 88 588 452 HOH HOH . M 5 HOH B 89 589 435 HOH HOH . M 5 HOH B 90 590 465 HOH HOH . M 5 HOH B 91 591 414 HOH HOH . M 5 HOH B 92 592 414 HOH HOH . M 5 HOH B 93 593 455 HOH HOH . M 5 HOH B 94 594 428 HOH HOH . M 5 HOH B 95 595 436 HOH HOH . M 5 HOH B 96 596 468 HOH HOH . M 5 HOH B 97 597 467 HOH HOH . M 5 HOH B 98 598 479 HOH HOH . M 5 HOH B 99 599 415 HOH HOH . M 5 HOH B 100 600 405 HOH HOH . M 5 HOH B 101 601 499 HOH HOH . M 5 HOH B 102 602 4 HOH HOH . M 5 HOH B 103 603 448 HOH HOH . M 5 HOH B 104 604 384 HOH HOH . M 5 HOH B 105 605 422 HOH HOH . M 5 HOH B 106 606 476 HOH HOH . M 5 HOH B 107 607 462 HOH HOH . M 5 HOH B 108 608 481 HOH HOH . M 5 HOH B 109 609 9 HOH HOH . M 5 HOH B 110 610 489 HOH HOH . M 5 HOH B 111 611 446 HOH HOH . M 5 HOH B 112 612 440 HOH HOH . M 5 HOH B 113 613 509 HOH HOH . M 5 HOH B 114 614 416 HOH HOH . M 5 HOH B 115 615 470 HOH HOH . M 5 HOH B 116 616 514 HOH HOH . M 5 HOH B 117 617 6 HOH HOH . M 5 HOH B 118 618 488 HOH HOH . M 5 HOH B 119 619 3 HOH HOH . M 5 HOH B 120 620 438 HOH HOH . M 5 HOH B 121 621 407 HOH HOH . M 5 HOH B 122 622 513 HOH HOH . M 5 HOH B 123 623 1 HOH HOH . M 5 HOH B 124 624 464 HOH HOH . M 5 HOH B 125 625 466 HOH HOH . M 5 HOH B 126 626 485 HOH HOH . M 5 HOH B 127 627 495 HOH HOH . M 5 HOH B 128 628 419 HOH HOH . M 5 HOH B 129 629 442 HOH HOH . M 5 HOH B 130 630 459 HOH HOH . M 5 HOH B 131 631 434 HOH HOH . M 5 HOH B 132 632 474 HOH HOH . M 5 HOH B 133 633 507 HOH HOH . M 5 HOH B 134 634 425 HOH HOH . M 5 HOH B 135 635 480 HOH HOH . M 5 HOH B 136 636 453 HOH HOH . M 5 HOH B 137 637 7 HOH HOH . M 5 HOH B 138 638 492 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 12.023 _atom_site.Cartn_y 0.158 _atom_site.Cartn_z 11.148 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 18.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 401 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 69 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #