data_5SXI # _model_server_result.job_id 4YhEtncRLygymIIpoojPUw _model_server_result.datetime_utc '2024-11-25 01:36:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sxi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 5SXI # _exptl.entry_id 5SXI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 116.158 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description trans-cyclohexane-1,4-diol _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SXI _cell.length_a 114.155 _cell.length_b 116.766 _cell.length_c 150.546 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SXI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 34 A SER 6 1_555 A N SEP 35 A SEP 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale2 A C SEP 35 A SEP 7 1_555 A N GLY 36 A GLY 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MET 817 A MET 789 1_555 A N SEP 818 A SEP 790 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale4 A C SEP 818 A SEP 790 1_555 A N GLU 819 A GLU 791 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? # _chem_comp.formula 'C6 H12 O2' _chem_comp.formula_weight 116.158 _chem_comp.id 71J _chem_comp.mon_nstd_flag . _chem_comp.name trans-cyclohexane-1,4-diol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C5 71J sing 1 n n C4 C5 71J sing 2 n n C4 C3 71J sing 3 n n C5 C 71J sing 4 n n C3 C2 71J sing 5 n n C C1 71J sing 6 n n C2 C1 71J sing 7 n n C2 O1 71J sing 8 n n O H1 71J sing 9 n n C1 H2 71J sing 10 n n C1 H3 71J sing 11 n n C H4 71J sing 12 n n C H5 71J sing 13 n n C2 H6 71J sing 14 n n O1 H7 71J sing 15 n n C3 H8 71J sing 16 n n C3 H9 71J sing 17 n n C4 H10 71J sing 18 n n C4 H11 71J sing 19 n n C5 H12 71J sing 20 n n # _atom_sites.entry_id 5SXI _atom_sites.fract_transf_matrix[1][1] 0.00876 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008564 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006642 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id 71J _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 701 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 71J _pdbx_nonpoly_scheme.auth_mon_id 3AI _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O 71J . . . C 3 56.159 43.753 73.291 1 170.72 ? O 71J 701 B 1 HETATM 2 C C1 71J . . . C 3 58.356 43.999 76.336 1 176.65 ? C1 71J 701 B 1 HETATM 3 C C 71J . . . C 3 57.254 43.469 75.418 1 177.91 ? C 71J 701 B 1 HETATM 4 C C2 71J . . . C 3 58.548 45.501 76.124 1 178.44 ? C2 71J 701 B 1 HETATM 5 O O1 71J . . . C 3 59.469 46.071 77.078 1 156.75 ? O1 71J 701 B 1 HETATM 6 C C3 71J . . . C 3 59.049 45.693 74.691 1 178.24 ? C3 71J 701 B 1 HETATM 7 C C4 71J . . . C 3 58.037 45.205 73.653 1 173.97 ? C4 71J 701 B 1 HETATM 8 C C5 71J . . . C 3 57.445 43.815 73.93 1 178.31 ? C5 71J 701 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #