data_5SXV # _model_server_result.job_id nBbKmnMbpR-NtELCan1sNg _model_server_result.datetime_utc '2024-12-02 17:43:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5sxv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"VA","auth_seq_id":404}' # _entry.id 5SXV # _exptl.entry_id 5SXV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 195.237 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 107.04 _cell.angle_gamma 90 _cell.entry_id 5SXV _cell.length_a 105.747 _cell.length_b 266.935 _cell.length_c 111.416 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SXV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA pentameric 5 author_and_software_defined_assembly 1 PISA pentameric 5 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,AB,BB,CB 1 1 F,G,H,I,J,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,DB,EB 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 Q N N ? 3 R N N ? 3 Y N N ? 3 Z N N ? 3 EA N N ? 3 IA N N ? 3 NA N N ? 3 RA N N ? 3 VA N N ? 3 ZA N N # _chem_comp.formula 'C6 H13 N O4 S' _chem_comp.formula_weight 195.237 _chem_comp.id MES _chem_comp.mon_nstd_flag . _chem_comp.name '2-(N-MORPHOLINO)-ETHANESULFONIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 MES sing 226 n n O1 C6 MES sing 227 n n C2 C3 MES sing 228 n n C2 H21 MES sing 229 n n C2 H22 MES sing 230 n n C3 N4 MES sing 231 n n C3 H31 MES sing 232 n n C3 H32 MES sing 233 n n N4 C5 MES sing 234 n n N4 C7 MES sing 235 n n N4 HN4 MES sing 236 n n C5 C6 MES sing 237 n n C5 H51 MES sing 238 n n C5 H52 MES sing 239 n n C6 H61 MES sing 240 n n C6 H62 MES sing 241 n n C7 C8 MES sing 242 n n C7 H71 MES sing 243 n n C7 H72 MES sing 244 n n C8 S MES sing 245 n n C8 H81 MES sing 246 n n C8 H82 MES sing 247 n n S O1S MES doub 248 n n S O2S MES doub 249 n n S O3S MES sing 250 n n # _atom_sites.entry_id 5SXV _atom_sites.fract_transf_matrix[1][1] 0.009457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002898 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003746 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009387 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 2 BRJ A 1 401 401 BRJ BRJ . L 2 BRJ A 1 402 402 BRJ BRJ . M 2 BRJ A 1 403 403 BRJ BRJ . N 2 BRJ B 1 401 401 BRJ BRJ . O 2 BRJ B 1 402 402 BRJ BRJ . P 2 BRJ B 1 403 403 BRJ BRJ . Q 3 MES B 1 404 1 MES MES . R 3 MES B 1 405 2 MES MES . S 2 BRJ C 1 401 401 BRJ BRJ . T 2 BRJ C 1 402 402 BRJ BRJ . U 2 BRJ C 1 403 403 BRJ BRJ . V 2 BRJ D 1 401 401 BRJ BRJ . W 2 BRJ D 1 402 402 BRJ BRJ . X 2 BRJ D 1 403 403 BRJ BRJ . Y 3 MES D 1 404 3 MES MES . Z 3 MES D 1 405 4 MES MES . AA 2 BRJ E 1 401 421 BRJ BRJ . BA 2 BRJ E 1 402 401 BRJ BRJ . CA 2 BRJ E 1 403 402 BRJ BRJ . DA 2 BRJ E 1 404 403 BRJ BRJ . EA 3 MES E 1 405 5 MES MES . FA 2 BRJ F 1 401 401 BRJ BRJ . GA 2 BRJ F 1 402 402 BRJ BRJ . HA 2 BRJ F 1 403 403 BRJ BRJ . IA 3 MES F 1 404 6 MES MES . JA 2 BRJ G 1 401 421 BRJ BRJ . KA 2 BRJ G 1 402 401 BRJ BRJ . LA 2 BRJ G 1 403 402 BRJ BRJ . MA 2 BRJ G 1 404 403 BRJ BRJ . NA 3 MES G 1 405 7 MES MES . OA 2 BRJ H 1 401 401 BRJ BRJ . PA 2 BRJ H 1 402 402 BRJ BRJ . QA 2 BRJ H 1 403 403 BRJ BRJ . RA 3 MES H 1 404 8 MES MES . SA 2 BRJ I 1 401 401 BRJ BRJ . TA 2 BRJ I 1 402 402 BRJ BRJ . UA 2 BRJ I 1 403 403 BRJ BRJ . VA 3 MES I 1 404 9 MES MES . WA 2 BRJ J 1 401 401 BRJ BRJ . XA 2 BRJ J 1 402 402 BRJ BRJ . YA 2 BRJ J 1 403 403 BRJ BRJ . ZA 3 MES J 1 404 10 MES MES . AB 4 HOH B 1 501 3 HOH HOH . BB 4 HOH D 1 501 6 HOH HOH . BB 4 HOH D 2 502 5 HOH HOH . BB 4 HOH D 3 503 4 HOH HOH . BB 4 HOH D 4 504 1 HOH HOH . CB 4 HOH E 1 501 2 HOH HOH . CB 4 HOH E 2 502 10 HOH HOH . DB 4 HOH H 1 501 8 HOH HOH . DB 4 HOH H 2 502 7 HOH HOH . EB 4 HOH I 1 501 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 MES . . . VA 3 115.738 59.67 245.111 1 172.41 ? O1 MES 404 I 1 HETATM 2 C C2 MES . . . VA 3 116.577 58.514 245.146 1 157.87 ? C2 MES 404 I 1 HETATM 3 C C3 MES . . . VA 3 116.228 57.533 244.03 1 157.46 ? C3 MES 404 I 1 HETATM 4 N N4 MES . . . VA 3 114.801 57.259 244.114 1 166.04 ? N4 MES 404 I 1 HETATM 5 C C5 MES . . . VA 3 113.991 58.457 243.951 1 162.41 ? C5 MES 404 I 1 HETATM 6 C C6 MES . . . VA 3 114.345 59.36 245.123 1 165.13 ? C6 MES 404 I 1 HETATM 7 C C7 MES . . . VA 3 114.358 56.134 243.298 1 150.97 ? C7 MES 404 I 1 HETATM 8 C C8 MES . . . VA 3 113.173 55.503 244.031 1 160.75 ? C8 MES 404 I 1 HETATM 9 S S MES . . . VA 3 112.004 54.896 243.004 1 189.75 ? S MES 404 I 1 HETATM 10 O O1S MES . . . VA 3 111.902 53.433 243.204 1 161.1 ? O1S MES 404 I 1 HETATM 11 O O2S MES . . . VA 3 112.317 55.163 241.582 1 170.75 ? O2S MES 404 I 1 HETATM 12 O O3S MES . . . VA 3 110.697 55.5 243.354 1 157.41 ? O3S MES 404 I 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 167 _model_server_stats.query_time_ms 357 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 12 #