data_5SZC # _model_server_result.job_id IKOIdz_bWXFDeZu9mN3g-g _model_server_result.datetime_utc '2024-11-04 20:33:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5szc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 5SZC # _exptl.entry_id 5SZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SZC _cell.length_a 39.321 _cell.length_b 39.321 _cell.length_c 147.571 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B C THR 3 H THR 3 1_555 B N MLZ 4 H MLZ 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 B C MLZ 4 H MLZ 4 1_555 B N GLN 5 H GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale3 B C GLY 13 H GLY 13 1_555 B N ALY 14 H ALY 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 B C ALY 14 H ALY 14 1_555 B N ALA 15 H ALA 15 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? metalc ? metalc1 A SG CYS 9 A CYS 262 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.34 ? metalc ? metalc2 A SG CYS 12 A CYS 265 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc3 A SG CYS 31 A CYS 284 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc4 A SG CYS 34 A CYS 287 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.299 ? metalc ? metalc5 A ND1 HIS 39 A HIS 292 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc6 A SG CYS 42 A CYS 295 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc7 A SG CYS 60 A CYS 313 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc8 A SG CYS 63 A CYS 316 1_555 D ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.303 ? metalc ? metalc9 A SG CYS 66 A CYS 319 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc10 A SG CYS 69 A CYS 322 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc11 A SG CYS 81 A CYS 334 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.325 ? metalc ? metalc12 A SG CYS 84 A CYS 337 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc13 A ND1 HIS 89 A HIS 342 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc14 A SG CYS 92 A CYS 345 1_555 E ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc15 A SG CYS 107 A CYS 360 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc16 A SG CYS 110 A CYS 363 1_555 F ZN ZN . A ZN 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5SZC _atom_sites.fract_transf_matrix[1][1] 0.025431 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025431 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006776 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN A 1 401 401 ZN ZN . D 3 ZN A 1 402 402 ZN ZN . E 3 ZN A 1 403 403 ZN ZN . F 3 ZN A 1 404 404 ZN ZN . G 4 MPD A 1 405 405 MPD MPD . H 5 HOH A 1 501 501 HOH HOH . H 5 HOH A 2 502 502 HOH HOH . H 5 HOH A 3 503 503 HOH HOH . H 5 HOH A 4 504 505 HOH HOH . H 5 HOH A 5 505 506 HOH HOH . H 5 HOH A 6 506 507 HOH HOH . H 5 HOH A 7 507 504 HOH HOH . H 5 HOH A 8 508 521 HOH HOH . H 5 HOH A 9 509 508 HOH HOH . H 5 HOH A 10 510 510 HOH HOH . H 5 HOH A 11 511 509 HOH HOH . H 5 HOH A 12 512 511 HOH HOH . H 5 HOH A 13 513 515 HOH HOH . H 5 HOH A 14 514 514 HOH HOH . H 5 HOH A 15 515 512 HOH HOH . H 5 HOH A 16 516 513 HOH HOH . H 5 HOH A 17 517 518 HOH HOH . H 5 HOH A 18 518 516 HOH HOH . H 5 HOH A 19 519 517 HOH HOH . H 5 HOH A 20 520 523 HOH HOH . H 5 HOH A 21 521 519 HOH HOH . H 5 HOH A 22 522 520 HOH HOH . H 5 HOH A 23 523 524 HOH HOH . H 5 HOH A 24 524 522 HOH HOH . H 5 HOH A 25 525 525 HOH HOH . H 5 HOH A 26 526 527 HOH HOH . H 5 HOH A 27 527 526 HOH HOH . H 5 HOH A 28 528 528 HOH HOH . H 5 HOH A 29 529 529 HOH HOH . H 5 HOH A 30 530 531 HOH HOH . H 5 HOH A 31 531 553 HOH HOH . H 5 HOH A 32 532 535 HOH HOH . H 5 HOH A 33 533 536 HOH HOH . H 5 HOH A 34 534 532 HOH HOH . H 5 HOH A 35 535 533 HOH HOH . H 5 HOH A 36 536 530 HOH HOH . H 5 HOH A 37 537 534 HOH HOH . H 5 HOH A 38 538 538 HOH HOH . H 5 HOH A 39 539 537 HOH HOH . H 5 HOH A 40 540 542 HOH HOH . H 5 HOH A 41 541 539 HOH HOH . H 5 HOH A 42 542 540 HOH HOH . H 5 HOH A 43 543 541 HOH HOH . H 5 HOH A 44 544 543 HOH HOH . H 5 HOH A 45 545 550 HOH HOH . H 5 HOH A 46 546 549 HOH HOH . H 5 HOH A 47 547 546 HOH HOH . H 5 HOH A 48 548 548 HOH HOH . H 5 HOH A 49 549 545 HOH HOH . H 5 HOH A 50 550 544 HOH HOH . H 5 HOH A 51 551 554 HOH HOH . H 5 HOH A 52 552 556 HOH HOH . H 5 HOH A 53 553 551 HOH HOH . H 5 HOH A 54 554 547 HOH HOH . H 5 HOH A 55 555 555 HOH HOH . H 5 HOH A 56 556 552 HOH HOH . H 5 HOH A 57 557 558 HOH HOH . H 5 HOH A 58 558 559 HOH HOH . H 5 HOH A 59 559 557 HOH HOH . H 5 HOH A 60 560 561 HOH HOH . H 5 HOH A 61 561 569 HOH HOH . H 5 HOH A 62 562 564 HOH HOH . H 5 HOH A 63 563 563 HOH HOH . H 5 HOH A 64 564 574 HOH HOH . H 5 HOH A 65 565 568 HOH HOH . H 5 HOH A 66 566 566 HOH HOH . H 5 HOH A 67 567 560 HOH HOH . H 5 HOH A 68 568 565 HOH HOH . H 5 HOH A 69 569 577 HOH HOH . H 5 HOH A 70 570 562 HOH HOH . H 5 HOH A 71 571 572 HOH HOH . H 5 HOH A 72 572 570 HOH HOH . H 5 HOH A 73 573 573 HOH HOH . H 5 HOH A 74 574 567 HOH HOH . H 5 HOH A 75 575 571 HOH HOH . H 5 HOH A 76 576 575 HOH HOH . H 5 HOH A 77 577 576 HOH HOH . H 5 HOH A 78 578 578 HOH HOH . H 5 HOH A 79 579 581 HOH HOH . H 5 HOH A 80 580 579 HOH HOH . H 5 HOH A 81 581 580 HOH HOH . H 5 HOH A 82 582 582 HOH HOH . H 5 HOH A 83 583 587 HOH HOH . H 5 HOH A 84 584 583 HOH HOH . H 5 HOH A 85 585 584 HOH HOH . H 5 HOH A 86 586 585 HOH HOH . H 5 HOH A 87 587 586 HOH HOH . H 5 HOH A 88 588 588 HOH HOH . H 5 HOH A 89 589 590 HOH HOH . H 5 HOH A 90 590 589 HOH HOH . H 5 HOH A 91 591 591 HOH HOH . H 5 HOH A 92 592 592 HOH HOH . H 5 HOH A 93 593 593 HOH HOH . H 5 HOH A 94 594 595 HOH HOH . H 5 HOH A 95 595 596 HOH HOH . H 5 HOH A 96 596 598 HOH HOH . H 5 HOH A 97 597 594 HOH HOH . H 5 HOH A 98 598 597 HOH HOH . H 5 HOH A 99 599 599 HOH HOH . H 5 HOH A 100 600 600 HOH HOH . H 5 HOH A 101 601 602 HOH HOH . H 5 HOH A 102 602 601 HOH HOH . H 5 HOH A 103 603 603 HOH HOH . H 5 HOH A 104 604 604 HOH HOH . H 5 HOH A 105 605 605 HOH HOH . H 5 HOH A 106 606 607 HOH HOH . H 5 HOH A 107 607 606 HOH HOH . H 5 HOH A 108 608 608 HOH HOH . H 5 HOH A 109 609 609 HOH HOH . H 5 HOH A 110 610 611 HOH HOH . H 5 HOH A 111 611 610 HOH HOH . H 5 HOH A 112 612 612 HOH HOH . H 5 HOH A 113 613 613 HOH HOH . H 5 HOH A 114 614 614 HOH HOH . H 5 HOH A 115 615 615 HOH HOH . H 5 HOH A 116 616 616 HOH HOH . H 5 HOH A 117 617 617 HOH HOH . H 5 HOH A 118 618 618 HOH HOH . H 5 HOH A 119 619 619 HOH HOH . H 5 HOH A 120 620 620 HOH HOH . H 5 HOH A 121 621 621 HOH HOH . H 5 HOH A 122 622 622 HOH HOH . H 5 HOH A 123 623 623 HOH HOH . H 5 HOH A 124 624 624 HOH HOH . H 5 HOH A 125 625 625 HOH HOH . H 5 HOH A 126 626 628 HOH HOH . H 5 HOH A 127 627 629 HOH HOH . H 5 HOH A 128 628 626 HOH HOH . H 5 HOH A 129 629 627 HOH HOH . H 5 HOH A 130 630 630 HOH HOH . H 5 HOH A 131 631 631 HOH HOH . H 5 HOH A 132 632 634 HOH HOH . H 5 HOH A 133 633 632 HOH HOH . H 5 HOH A 134 634 633 HOH HOH . H 5 HOH A 135 635 635 HOH HOH . H 5 HOH A 136 636 636 HOH HOH . H 5 HOH A 137 637 637 HOH HOH . H 5 HOH A 138 638 638 HOH HOH . H 5 HOH A 139 639 639 HOH HOH . H 5 HOH A 140 640 640 HOH HOH . H 5 HOH A 141 641 641 HOH HOH . H 5 HOH A 142 642 642 HOH HOH . H 5 HOH A 143 643 643 HOH HOH . H 5 HOH A 144 644 645 HOH HOH . H 5 HOH A 145 645 644 HOH HOH . H 5 HOH A 146 646 647 HOH HOH . H 5 HOH A 147 647 646 HOH HOH . H 5 HOH A 148 648 648 HOH HOH . H 5 HOH A 149 649 649 HOH HOH . H 5 HOH A 150 650 650 HOH HOH . H 5 HOH A 151 651 651 HOH HOH . H 5 HOH A 152 652 652 HOH HOH . H 5 HOH A 153 653 653 HOH HOH . H 5 HOH A 154 654 654 HOH HOH . H 5 HOH A 155 655 655 HOH HOH . H 5 HOH A 156 656 656 HOH HOH . H 5 HOH A 157 657 657 HOH HOH . I 5 HOH H 1 101 101 HOH HOH . I 5 HOH H 2 102 102 HOH HOH . I 5 HOH H 3 103 103 HOH HOH . I 5 HOH H 4 104 105 HOH HOH . I 5 HOH H 5 105 104 HOH HOH . I 5 HOH H 6 106 106 HOH HOH . I 5 HOH H 7 107 107 HOH HOH . I 5 HOH H 8 108 109 HOH HOH . I 5 HOH H 9 109 108 HOH HOH . I 5 HOH H 10 110 110 HOH HOH . I 5 HOH H 11 111 111 HOH HOH . I 5 HOH H 12 112 112 HOH HOH . I 5 HOH H 13 113 113 HOH HOH . I 5 HOH H 14 114 114 HOH HOH . I 5 HOH H 15 115 115 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.374 _atom_site.Cartn_y 24.777 _atom_site.Cartn_z 88.612 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.1 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #