data_5SZG # _model_server_result.job_id Mq4rV5o2irkvhb4xLbzpwA _model_server_result.datetime_utc '2024-12-17 04:45:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5szg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":2002}' # _entry.id 5SZG # _exptl.entry_id 5SZG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SZG _cell.length_a 51.858 _cell.length_b 78.848 _cell.length_c 95.557 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SZG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 54 A LEU 1893 1_555 A N MSE 55 A MSE 1894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale2 A C MSE 55 A MSE 1894 1_555 A N GLN 56 A GLN 1895 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C ALA 67 A ALA 1906 1_555 A N MSE 68 A MSE 1907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 A C MSE 68 A MSE 1907 1_555 A N VAL 69 A VAL 1908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C LEU 75 A LEU 1914 1_555 A N MSE 76 A MSE 1915 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale6 A C MSE 76 A MSE 1915 1_555 A N ILE 77 A ILE 1916 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? covale ? covale7 A C ARG 98 A ARG 1937 1_555 A N MSE 99 A MSE 1938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale8 A C MSE 99 A MSE 1938 1_555 A N ALA 100 A ALA 1939 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale9 A C GLU 120 A GLU 1959 1_555 A N MSE 121 A MSE 1960 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale10 A C MSE 121 A MSE 1960 1_555 A N LEU 122 A LEU 1961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale11 B C GLY 45 B GLY 1884 1_555 B N MSE 46 B MSE 1885 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 B C MSE 46 B MSE 1885 1_555 B N GLY 47 B GLY 1886 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.347 ? covale ? covale13 B C LEU 54 B LEU 1893 1_555 B N MSE 55 B MSE 1894 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale14 B C MSE 55 B MSE 1894 1_555 B N GLN 56 B GLN 1895 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale15 B C ALA 67 B ALA 1906 1_555 B N MSE 68 B MSE 1907 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale16 B C MSE 68 B MSE 1907 1_555 B N VAL 69 B VAL 1908 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale17 B C LEU 75 B LEU 1914 1_555 B N MSE 76 B MSE 1915 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 B C MSE 76 B MSE 1915 1_555 B N ILE 77 B ILE 1916 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale19 B C ARG 98 B ARG 1937 1_555 B N MSE 99 B MSE 1938 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale20 B C GLU 120 B GLU 1959 1_555 B N MSE 121 B MSE 1960 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? covale ? covale21 B C MSE 121 B MSE 1960 1_555 B N LEU 122 B LEU 1961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 222 n n C1 C2 PEG sing 223 n n C1 H11 PEG sing 224 n n C1 H12 PEG sing 225 n n O1 HO1 PEG sing 226 n n C2 O2 PEG sing 227 n n C2 H21 PEG sing 228 n n C2 H22 PEG sing 229 n n O2 C3 PEG sing 230 n n C3 C4 PEG sing 231 n n C3 H31 PEG sing 232 n n C3 H32 PEG sing 233 n n C4 O4 PEG sing 234 n n C4 H41 PEG sing 235 n n C4 H42 PEG sing 236 n n O4 HO4 PEG sing 237 n n # _atom_sites.entry_id 5SZG _atom_sites.fract_transf_matrix[1][1] 0.019283 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012683 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010465 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PEG A 1 2001 1 PEG PEG . D 2 PEG A 1 2002 2 PEG PEG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . D 2 7.404 33.789 7.289 1 72.45 ? C1 PEG 2002 A 1 HETATM 2 O O1 PEG . . . D 2 6.772 34.418 6.14 1 63.62 ? O1 PEG 2002 A 1 HETATM 3 C C2 PEG . . . D 2 6.797 32.436 7.69 1 69.44 ? C2 PEG 2002 A 1 HETATM 4 O O2 PEG . . . D 2 7.027 31.986 9.066 1 86.71 ? O2 PEG 2002 A 1 HETATM 5 C C3 PEG . . . D 2 6.799 32.835 10.237 1 80.61 ? C3 PEG 2002 A 1 HETATM 6 C C4 PEG . . . D 2 5.653 32.443 11.2 1 71.63 ? C4 PEG 2002 A 1 HETATM 7 O O4 PEG . . . D 2 5.37 33.589 12.09 1 65.52 ? O4 PEG 2002 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 7 #