data_5SZJ # _model_server_result.job_id tUIOo1R2eOqvcb0kxAk8Aw _model_server_result.datetime_utc '2024-12-16 16:44:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5szj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":701}' # _entry.id 5SZJ # _exptl.entry_id 5SZJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5SZJ _cell.length_a 153.68 _cell.length_b 61.87 _cell.length_c 55.57 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5SZJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG1 THR 25 A THR 23 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.977 ? metalc ? metalc2 A OG1 THR 43 A THR 41 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? metalc ? metalc3 C O3G GNP . A GNP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc4 C O2B GNP . A GNP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc5 D MG MG . A MG 302 1_555 F O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc6 D MG MG . A MG 302 1_555 F O HOH . A HOH 414 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.439 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 288 n n C1 C2 PEG sing 289 n n C1 H11 PEG sing 290 n n C1 H12 PEG sing 291 n n O1 HO1 PEG sing 292 n n C2 O2 PEG sing 293 n n C2 H21 PEG sing 294 n n C2 H22 PEG sing 295 n n O2 C3 PEG sing 296 n n C3 C4 PEG sing 297 n n C3 H31 PEG sing 298 n n C3 H32 PEG sing 299 n n C4 O4 PEG sing 300 n n C4 H41 PEG sing 301 n n C4 H42 PEG sing 302 n n O4 HO4 PEG sing 303 n n # _atom_sites.entry_id 5SZJ _atom_sites.fract_transf_matrix[1][1] 0.006507 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016163 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017995 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GNP A 1 301 302 GNP GNP . D 4 MG A 1 302 1 MG MG . E 5 PEG B 1 701 1 PEG PEG . F 6 HOH A 1 401 28 HOH HOH . F 6 HOH A 2 402 35 HOH HOH . F 6 HOH A 3 403 27 HOH HOH . F 6 HOH A 4 404 23 HOH HOH . F 6 HOH A 5 405 3 HOH HOH . F 6 HOH A 6 406 11 HOH HOH . F 6 HOH A 7 407 37 HOH HOH . F 6 HOH A 8 408 16 HOH HOH . F 6 HOH A 9 409 6 HOH HOH . F 6 HOH A 10 410 8 HOH HOH . F 6 HOH A 11 411 21 HOH HOH . F 6 HOH A 12 412 14 HOH HOH . F 6 HOH A 13 413 4 HOH HOH . F 6 HOH A 14 414 2 HOH HOH . F 6 HOH A 15 415 20 HOH HOH . F 6 HOH A 16 416 18 HOH HOH . F 6 HOH A 17 417 26 HOH HOH . F 6 HOH A 18 418 7 HOH HOH . F 6 HOH A 19 419 36 HOH HOH . F 6 HOH A 20 420 19 HOH HOH . F 6 HOH A 21 421 9 HOH HOH . F 6 HOH A 22 422 13 HOH HOH . F 6 HOH A 23 423 22 HOH HOH . G 6 HOH B 1 801 17 HOH HOH . G 6 HOH B 2 802 30 HOH HOH . G 6 HOH B 3 803 29 HOH HOH . G 6 HOH B 4 804 1 HOH HOH . G 6 HOH B 5 805 33 HOH HOH . G 6 HOH B 6 806 12 HOH HOH . G 6 HOH B 7 807 24 HOH HOH . G 6 HOH B 8 808 25 HOH HOH . G 6 HOH B 9 809 39 HOH HOH . G 6 HOH B 10 810 31 HOH HOH . G 6 HOH B 11 811 32 HOH HOH . G 6 HOH B 12 812 15 HOH HOH . G 6 HOH B 13 813 10 HOH HOH . G 6 HOH B 14 814 5 HOH HOH . G 6 HOH B 15 815 38 HOH HOH . G 6 HOH B 16 816 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 5 34.251 24.608 -28.616 1 88.15 ? C1 PEG 701 B 1 HETATM 2 O O1 PEG . . . E 5 32.968 25.161 -28.42 1 87.44 ? O1 PEG 701 B 1 HETATM 3 C C2 PEG . . . E 5 35.206 25.133 -27.563 1 87.64 ? C2 PEG 701 B 1 HETATM 4 O O2 PEG . . . E 5 36.541 24.983 -27.993 1 86.5 ? O2 PEG 701 B 1 HETATM 5 C C3 PEG . . . E 5 36.807 25.57 -29.243 1 85.57 ? C3 PEG 701 B 1 HETATM 6 C C4 PEG . . . E 5 37.896 24.773 -29.929 1 70.84 ? C4 PEG 701 B 1 HETATM 7 O O4 PEG . . . E 5 38.695 25.636 -30.706 1 67.87 ? O4 PEG 701 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 25 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 318 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 7 #