data_5T0L
#
_model_server_result.job_id            BcmZMc2SHWTkxHpEkRHQVg 
_model_server_result.datetime_utc      '2024-11-24 03:24:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t0l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":703}' 
#
_entry.id    5T0L 
#
_exptl.entry_id    5T0L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              477.469 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5T0L 
_cell.length_a            51.277 
_cell.length_b            143.983 
_cell.length_c            170.214 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5T0L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 E N N 
? 4 I N N 
#
_chem_comp.formula           'C24 H23 N5 O6' 
_chem_comp.formula_weight    477.469 
_chem_comp.id                CB3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '10-PROPARGYL-5,8-DIDEAZAFOLIC ACID' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 CB3 sing 110 n y 
N1 C8A CB3 sing 111 n y 
N1 HN1 CB3 sing 112 n n 
C2 NA2 CB3 sing 113 n n 
C2 N3 CB3 doub 114 n y 
NA2 HN21 CB3 sing 115 n n 
NA2 HN22 CB3 sing 116 n n 
N3 C4 CB3 sing 117 n y 
C4 O4 CB3 doub 118 n n 
C4 C4A CB3 sing 119 n y 
C4A C5 CB3 doub 120 n y 
C4A C8A CB3 sing 121 n y 
C5 C6 CB3 sing 122 n y 
C5 H5 CB3 sing 123 n n 
C6 C7 CB3 doub 124 n y 
C6 C9 CB3 sing 125 n n 
C7 C8 CB3 sing 126 n y 
C7 H7 CB3 sing 127 n n 
C8 C8A CB3 doub 128 n y 
C8 H8 CB3 sing 129 n n 
C9 N10 CB3 sing 130 n n 
C9 H91 CB3 sing 131 n n 
C9 H92 CB3 sing 132 n n 
N10 C14 CB3 sing 133 n n 
N10 CP1 CB3 sing 134 n n 
C11 C12 CB3 doub 135 n y 
C11 C16 CB3 sing 136 n y 
C11 C CB3 sing 137 n n 
C12 C13 CB3 sing 138 n y 
C12 H12 CB3 sing 139 n n 
C13 C14 CB3 doub 140 n y 
C13 H13 CB3 sing 141 n n 
C14 C15 CB3 sing 142 n y 
C15 C16 CB3 doub 143 n y 
C15 H15 CB3 sing 144 n n 
C16 H16 CB3 sing 145 n n 
C O CB3 doub 146 n n 
C N CB3 sing 147 n n 
N CA CB3 sing 148 n n 
N HN CB3 sing 149 n n 
CA CB CB3 sing 150 n n 
CA CT CB3 sing 151 n n 
CA HA CB3 sing 152 n n 
CB CG CB3 sing 153 n n 
CB HB1 CB3 sing 154 n n 
CB HB2 CB3 sing 155 n n 
CG CD CB3 sing 156 n n 
CG HG1 CB3 sing 157 n n 
CG HG2 CB3 sing 158 n n 
CD OE1 CB3 doub 159 n n 
CD OE2 CB3 sing 160 n n 
OE2 HOE2 CB3 sing 161 n n 
CT O1 CB3 doub 162 n n 
CT O2 CB3 sing 163 n n 
O2 HO2 CB3 sing 164 n n 
CP1 CP2 CB3 sing 165 n n 
CP1 HP11 CB3 sing 166 n n 
CP1 HP12 CB3 sing 167 n n 
CP2 CP3 CB3 trip 168 n n 
CP3 HP3 CB3 sing 169 n n 
#
_atom_sites.entry_id                     5T0L 
_atom_sites.fract_transf_matrix[1][1]    0.019502 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006945 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005875 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 UMP A 1 701 701 UMP UMP . 
D 3 NDP A 1 702 702 NDP NDP . 
E 4 CB3 A 1 703 703 CB3 CB3 . 
F 5 73X A 1 704 1 73X 015 . 
G 2 UMP B 1 701 701 UMP UMP . 
H 3 NDP B 1 702 702 NDP NDP . 
I 4 CB3 B 1 703 703 CB3 CB3 . 
J 5 73X B 1 704 2 73X 015 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 CB3 . . . E 4 15.198 81.557 -31.351 0.5 21.29 ? N1 CB3 703 A 1 
HETATM 2 C C2 CB3 . . . E 4 14.518 81.291 -32.481 0.5 21.38 ? C2 CB3 703 A 1 
HETATM 3 N NA2 CB3 . . . E 4 13.297 80.708 -32.384 0.5 21.19 ? NA2 CB3 703 A 1 
HETATM 4 N N3 CB3 . . . E 4 15.006 81.577 -33.713 0.5 21.1 ? N3 CB3 703 A 1 
HETATM 5 C C4 CB3 . . . E 4 16.209 82.152 -33.893 0.5 20.84 ? C4 CB3 703 A 1 
HETATM 6 O O4 CB3 . . . E 4 16.611 82.396 -35.048 0.5 21.12 ? O4 CB3 703 A 1 
HETATM 7 C C4A CB3 . . . E 4 17.01 82.477 -32.685 0.5 20.85 ? C4A CB3 703 A 1 
HETATM 8 C C5 CB3 . . . E 4 18.265 83.075 -32.725 0.5 20.86 ? C5 CB3 703 A 1 
HETATM 9 C C6 CB3 . . . E 4 18.921 83.328 -31.52 0.5 21.15 ? C6 CB3 703 A 1 
HETATM 10 C C7 CB3 . . . E 4 18.351 82.999 -30.29 0.5 21.01 ? C7 CB3 703 A 1 
HETATM 11 C C8 CB3 . . . E 4 17.099 82.4 -30.206 0.5 20.85 ? C8 CB3 703 A 1 
HETATM 12 C C8A CB3 . . . E 4 16.406 82.129 -31.377 0.5 20.96 ? C8A CB3 703 A 1 
HETATM 13 C C9 CB3 . . . E 4 20.282 83.974 -31.527 0.5 21.64 ? C9 CB3 703 A 1 
HETATM 14 N N10 CB3 . . . E 4 20.533 84.551 -32.836 0.5 22.14 ? N10 CB3 703 A 1 
HETATM 15 C C11 CB3 . . . E 4 18.03 87.464 -34.476 0.5 23.31 ? C11 CB3 703 A 1 
HETATM 16 C C12 CB3 . . . E 4 19.139 87.018 -35.189 0.5 22.95 ? C12 CB3 703 A 1 
HETATM 17 C C13 CB3 . . . E 4 19.971 86.044 -34.645 0.5 22.55 ? C13 CB3 703 A 1 
HETATM 18 C C14 CB3 . . . E 4 19.692 85.518 -33.391 0.5 22.47 ? C14 CB3 703 A 1 
HETATM 19 C C15 CB3 . . . E 4 18.583 85.96 -32.681 0.5 23.02 ? C15 CB3 703 A 1 
HETATM 20 C C16 CB3 . . . E 4 17.754 86.935 -33.224 0.5 23.32 ? C16 CB3 703 A 1 
HETATM 21 C C CB3 . . . E 4 17.117 88.507 -35.048 0.5 23.95 ? C CB3 703 A 1 
HETATM 22 O O CB3 . . . E 4 16.33 89.082 -34.309 0.5 23.94 ? O CB3 703 A 1 
HETATM 23 N N CB3 . . . E 4 17.182 88.774 -36.351 0.5 24.83 ? N CB3 703 A 1 
HETATM 24 C CA CB3 . . . E 4 18.119 89.74 -36.888 0.5 25.65 ? CA CB3 703 A 1 
HETATM 25 C CB CB3 . . . E 4 18.253 89.539 -38.398 0.5 26.35 ? CB CB3 703 A 1 
HETATM 26 C CG CB3 . . . E 4 19.536 88.772 -38.722 0.5 27.45 ? CG CB3 703 A 1 
HETATM 27 C CD CB3 . . . E 4 19.298 87.762 -39.822 0.5 28.49 ? CD CB3 703 A 1 
HETATM 28 O OE1 CB3 . . . E 4 19.398 86.541 -39.542 0.5 28.86 ? OE1 CB3 703 A 1 
HETATM 29 O OE2 CB3 . . . E 4 19.02 88.187 -40.97 0.5 29.43 ? OE2 CB3 703 A 1 
HETATM 30 C CT CB3 . . . E 4 17.689 91.147 -36.58 0.5 25.92 ? CT CB3 703 A 1 
HETATM 31 O O1 CB3 . . . E 4 17.331 91.434 -35.414 0.5 25.86 ? O1 CB3 703 A 1 
HETATM 32 O O2 CB3 . . . E 4 17.702 91.986 -37.508 0.5 26.73 ? O2 CB3 703 A 1 
HETATM 33 C CP1 CB3 . . . E 4 21.697 84.125 -33.573 0.5 22.39 ? CP1 CB3 703 A 1 
HETATM 34 C CP2 CB3 . . . E 4 21.237 83.236 -34.641 0.5 22.59 ? CP2 CB3 703 A 1 
HETATM 35 C CP3 CB3 . . . E 4 20.842 82.488 -35.595 0.5 22.85 ? CP3 CB3 703 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           35 
#