data_5T0L
#
_model_server_result.job_id            rLo0I2Vq-cRiPzitil7s4w 
_model_server_result.datetime_utc      '2024-10-12 07:26:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t0l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":704}' 
#
_entry.id    5T0L 
#
_exptl.entry_id    5T0L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              339.223 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            5-[4-(3,4-dichlorophenyl)piperazin-1-yl]pyrimidine-2,4-diamine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5T0L 
_cell.length_a            51.277 
_cell.length_b            143.983 
_cell.length_c            170.214 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5T0L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 F N N 
? 5 J N N 
#
_chem_comp.formula           'C14 H16 Cl2 N6' 
_chem_comp.formula_weight    339.223 
_chem_comp.id                73X 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              5-[4-(3,4-dichlorophenyl)piperazin-1-yl]pyrimidine-2,4-diamine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C6 C7 73X sing 1 n n 
C6 N 73X sing 2 n n 
C1 C 73X doub 3 n y 
C1 C2 73X sing 4 n y 
C C5 73X sing 5 n y 
CL1 C2 73X sing 6 n n 
C2 C3 73X doub 7 n y 
C5 N 73X sing 8 n n 
C5 C4 73X doub 9 n y 
C7 N1 73X sing 10 n n 
N C9 73X sing 11 n n 
C3 C4 73X sing 12 n y 
C3 CL 73X sing 13 n n 
N4 C13 73X sing 14 n n 
C9 C8 73X sing 15 n n 
N1 C10 73X sing 16 n n 
N1 C8 73X sing 17 n n 
C13 C10 73X doub 18 n y 
C13 N3 73X sing 19 n y 
C10 C11 73X sing 20 n y 
N3 C12 73X doub 21 n y 
C11 N2 73X doub 22 n y 
C12 N2 73X sing 23 n y 
C12 N5 73X sing 24 n n 
C1 H1 73X sing 25 n n 
C4 H2 73X sing 26 n n 
C H3 73X sing 27 n n 
C9 H4 73X sing 28 n n 
C9 H5 73X sing 29 n n 
C8 H6 73X sing 30 n n 
C8 H7 73X sing 31 n n 
C7 H8 73X sing 32 n n 
C7 H9 73X sing 33 n n 
C6 H10 73X sing 34 n n 
C6 H11 73X sing 35 n n 
N4 H12 73X sing 36 n n 
N4 H13 73X sing 37 n n 
N5 H14 73X sing 38 n n 
N5 H15 73X sing 39 n n 
C11 H16 73X sing 40 n n 
#
_atom_sites.entry_id                     5T0L 
_atom_sites.fract_transf_matrix[1][1]    0.019502 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006945 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005875 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 UMP A 1 701 701 UMP UMP . 
D 3 NDP A 1 702 702 NDP NDP . 
E 4 CB3 A 1 703 703 CB3 CB3 . 
F 5 73X A 1 704 1 73X 015 . 
G 2 UMP B 1 701 701 UMP UMP . 
H 3 NDP B 1 702 702 NDP NDP . 
I 4 CB3 B 1 703 703 CB3 CB3 . 
J 5 73X B 1 704 2 73X 015 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C12 73X . . . J 5 5.706 39.552 -62.371 0.6 25.79 ? C12 73X 704 B 1 
HETATM 2 C C13 73X . . . J 5 4.797 38.163 -64.029 0.6 26.11 ? C13 73X 704 B 1 
HETATM 3 CL CL1 73X . . . J 5 -4.023 36.21 -59.606 0.6 35.15 ? CL1 73X 704 B 1 
HETATM 4 C C2 73X . . . J 5 -2.634 35.989 -60.71 0.6 31.96 ? C2 73X 704 B 1 
HETATM 5 C C1 73X . . . J 5 -2.465 36.877 -61.771 0.6 31.03 ? C1 73X 704 B 1 
HETATM 6 C C3 73X . . . J 5 -1.741 34.949 -60.499 0.6 31.93 ? C3 73X 704 B 1 
HETATM 7 CL CL 73X . . . J 5 -1.969 33.801 -59.135 0.6 35.61 ? CL 73X 704 B 1 
HETATM 8 C C4 73X . . . J 5 -0.662 34.79 -61.357 0.6 30.5 ? C4 73X 704 B 1 
HETATM 9 C C5 73X . . . J 5 -0.485 35.671 -62.423 0.6 29.44 ? C5 73X 704 B 1 
HETATM 10 C C 73X . . . J 5 -1.383 36.72 -62.631 0.6 29.87 ? C 73X 704 B 1 
HETATM 11 N N 73X . . . J 5 0.623 35.496 -63.259 0.6 28.66 ? N 73X 704 B 1 
HETATM 12 C C9 73X . . . J 5 1.733 34.681 -62.793 0.6 28.34 ? C9 73X 704 B 1 
HETATM 13 C C8 73X . . . J 5 3.031 35.442 -63.085 0.6 27.91 ? C8 73X 704 B 1 
HETATM 14 N N1 73X . . . J 5 2.826 36.829 -63.505 0.6 27.02 ? N1 73X 704 B 1 
HETATM 15 C C7 73X . . . J 5 1.684 37.295 -64.297 0.6 27.52 ? C7 73X 704 B 1 
HETATM 16 C C6 73X . . . J 5 0.718 36.141 -64.556 0.6 28.09 ? C6 73X 704 B 1 
HETATM 17 C C10 73X . . . J 5 3.811 37.757 -63.133 0.6 26.35 ? C10 73X 704 B 1 
HETATM 18 N N4 73X . . . J 5 4.833 37.674 -65.297 0.6 26.3 ? N4 73X 704 B 1 
HETATM 19 N N3 73X . . . J 5 5.731 39.057 -63.63 0.6 25.76 ? N3 73X 704 B 1 
HETATM 20 N N5 73X . . . J 5 6.649 40.448 -61.997 0.6 26.09 ? N5 73X 704 B 1 
HETATM 21 N N2 73X . . . J 5 4.755 39.166 -61.486 0.6 25.72 ? N2 73X 704 B 1 
HETATM 22 C C11 73X . . . J 5 3.814 38.283 -61.841 0.6 26.05 ? C11 73X 704 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           22 
#