data_5T0N # _model_server_result.job_id ZORyXPG_d2jYxd06w59V8Q _model_server_result.datetime_utc '2024-10-13 07:25:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t0n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":501}' # _entry.id 5T0N # _exptl.entry_id 5T0N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 131.173 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description LEUCINE _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5T0N _cell.length_a 292.263 _cell.length_b 292.263 _cell.length_c 292.263 _cell.Z_PDB 120 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T0N _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 2 3' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,F 1 1 B,G 2 1 C,H 3 1 D,I 4 1 E,J 5 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C6 H13 N O2' _chem_comp.formula_weight 131.173 _chem_comp.id LEU _chem_comp.mon_nstd_flag y _chem_comp.name LEUCINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA LEU sing 171 n n N H LEU sing 172 n n N H2 LEU sing 173 n n CA C LEU sing 174 n n CA CB LEU sing 175 n n CA HA LEU sing 176 n n C O LEU doub 177 n n C OXT LEU sing 178 n n CB CG LEU sing 179 n n CB HB2 LEU sing 180 n n CB HB3 LEU sing 181 n n CG CD1 LEU sing 182 n n CG CD2 LEU sing 183 n n CG HG LEU sing 184 n n CD1 HD11 LEU sing 185 n n CD1 HD12 LEU sing 186 n n CD1 HD13 LEU sing 187 n n CD2 HD21 LEU sing 188 n n CD2 HD22 LEU sing 189 n n CD2 HD23 LEU sing 190 n n OXT HXT LEU sing 191 n n # _atom_sites.entry_id 5T0N _atom_sites.fract_transf_matrix[1][1] 0.003422 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.003422 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003422 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 LEU A 1 501 666 LEU LEU . G 2 LEU B 1 501 666 LEU LEU . H 2 LEU C 1 501 666 LEU LEU . I 2 LEU D 1 501 666 LEU LEU . J 2 LEU E 1 501 666 LEU LEU . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N LEU . . . H 2 94.142 306.486 266.418 1 36.02 ? N LEU 501 C 1 HETATM 2 C CA LEU . . . H 2 94.917 306.736 265.21 1 35.53 ? CA LEU 501 C 1 HETATM 3 C C LEU . . . H 2 96.354 306.259 265.42 1 38.77 ? C LEU 501 C 1 HETATM 4 O O LEU . . . H 2 97.271 306.503 264.625 1 35.7 ? O LEU 501 C 1 HETATM 5 C CB LEU . . . H 2 94.871 308.217 264.831 1 33.04 ? CB LEU 501 C 1 HETATM 6 C CG LEU . . . H 2 93.694 308.706 263.974 1 37.95 ? CG LEU 501 C 1 HETATM 7 C CD1 LEU . . . H 2 92.391 307.954 264.279 1 36.56 ? CD1 LEU 501 C 1 HETATM 8 C CD2 LEU . . . H 2 93.5 310.237 264.122 1 32.31 ? CD2 LEU 501 C 1 HETATM 9 O OXT LEU . . . H 2 96.619 305.592 266.419 1 39.47 ? OXT LEU 501 C 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 9 #