data_5T1S # _model_server_result.job_id cni2QEYFxGt-L65N29VRkA _model_server_result.datetime_utc '2024-11-22 12:00:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t1s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":9901}' # _entry.id 5T1S # _exptl.entry_id 5T1S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 411.539 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[3-(3,5-dimethylphenyl)-4-[4-(methylamino)butyl]quinolin-6-yl]pyridin-3-ol _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 125.05 _cell.angle_gamma 90 _cell.entry_id 5T1S _cell.length_a 144.34 _cell.length_b 139.3 _cell.length_c 88.09 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T1S _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,I 1 1 B,F,J 2 1 C,G,K 3 1 D,H,L 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLN 182 A GLN 341 1_555 A N TPO 183 A TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale2 A C TPO 183 A TPO 342 1_555 A N VAL 184 A VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale3 A C MET 185 A MET 344 1_555 A N TPO 186 A TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale4 A C TPO 186 A TPO 345 1_555 A N SEP 187 A SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale5 A C SEP 187 A SEP 346 1_555 A N ARG 188 A ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale6 B C GLN 182 B GLN 341 1_555 B N TPO 183 B TPO 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale7 B C TPO 183 B TPO 342 1_555 B N VAL 184 B VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale8 B C MET 185 B MET 344 1_555 B N TPO 186 B TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale9 B C TPO 186 B TPO 345 1_555 B N SEP 187 B SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale10 B C SEP 187 B SEP 346 1_555 B N ARG 188 B ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.351 ? covale ? covale11 C C TPO 183 C TPO 342 1_555 C N VAL 184 C VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale12 C C MET 185 C MET 344 1_555 C N TPO 186 C TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale13 C C TPO 186 C TPO 345 1_555 C N SEP 187 C SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale14 C C SEP 187 C SEP 346 1_555 C N ARG 188 C ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.345 ? covale ? covale15 D C TPO 183 D TPO 342 1_555 D N VAL 184 D VAL 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.339 ? covale ? covale16 D C MET 185 D MET 344 1_555 D N TPO 186 D TPO 345 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.342 ? covale ? covale17 D C TPO 186 D TPO 345 1_555 D N SEP 187 D SEP 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale18 D C SEP 187 D SEP 346 1_555 D N ARG 188 D ARG 347 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.346 ? # _chem_comp.formula 'C27 H29 N3 O' _chem_comp.formula_weight 411.539 _chem_comp.id 76Q _chem_comp.mon_nstd_flag . _chem_comp.name 5-[3-(3,5-dimethylphenyl)-4-[4-(methylamino)butyl]quinolin-6-yl]pyridin-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O31 C29 76Q sing 1 n n C28 C29 76Q doub 2 n y C28 N27 76Q sing 3 n y C29 C30 76Q sing 4 n y N27 C26 76Q doub 5 n y C30 C13 76Q doub 6 n y C26 C13 76Q sing 7 n y C13 C08 76Q sing 8 n n C09 C08 76Q doub 9 n y C09 C10 76Q sing 10 n y C08 C07 76Q sing 11 n y C10 C06 76Q doub 12 n y C07 C05 76Q doub 13 n y C06 C05 76Q sing 14 n y C06 N01 76Q sing 15 n y C05 C04 76Q sing 16 n y N01 C02 76Q doub 17 n y C04 C12 76Q sing 18 n n C04 C03 76Q doub 19 n y C12 C21 76Q sing 20 n n C02 C03 76Q sing 21 n y C03 C11 76Q sing 22 n n C21 C22 76Q sing 23 n n C14 C11 76Q doub 24 n y C14 C15 76Q sing 25 n y C11 C18 76Q sing 26 n y C22 C23 76Q sing 27 n n C23 N24 76Q sing 28 n n C19 C15 76Q sing 29 n n C15 C16 76Q doub 30 n y C18 C17 76Q doub 31 n y N24 C25 76Q sing 32 n n C16 C17 76Q sing 33 n y C17 C20 76Q sing 34 n n C02 H1 76Q sing 35 n n C07 H2 76Q sing 36 n n C09 H3 76Q sing 37 n n C10 H4 76Q sing 38 n n C12 H5 76Q sing 39 n n C12 H6 76Q sing 40 n n C14 H7 76Q sing 41 n n C16 H8 76Q sing 42 n n C18 H9 76Q sing 43 n n C19 H10 76Q sing 44 n n C19 H11 76Q sing 45 n n C19 H12 76Q sing 46 n n C20 H13 76Q sing 47 n n C20 H14 76Q sing 48 n n C20 H15 76Q sing 49 n n C21 H16 76Q sing 50 n n C21 H17 76Q sing 51 n n C22 H18 76Q sing 52 n n C22 H19 76Q sing 53 n n C23 H20 76Q sing 54 n n C23 H21 76Q sing 55 n n N24 H22 76Q sing 56 n n C25 H24 76Q sing 57 n n C25 H25 76Q sing 58 n n C25 H26 76Q sing 59 n n C26 H27 76Q sing 60 n n C28 H28 76Q sing 61 n n C30 H29 76Q sing 62 n n O31 H30 76Q sing 63 n n # _atom_sites.entry_id 5T1S _atom_sites.fract_transf_matrix[1][1] 0.006928 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00486 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013867 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 76Q A 1 9901 9901 76Q SCH . F 2 76Q B 1 9901 9901 76Q SCH . G 2 76Q C 1 9901 9901 76Q SCH . H 2 76Q D 1 9901 9901 76Q SCH . I 3 HOH A 1 10001 75 HOH WAT . I 3 HOH A 2 10002 35 HOH WAT . I 3 HOH A 3 10003 64 HOH WAT . I 3 HOH A 4 10004 66 HOH WAT . I 3 HOH A 5 10005 62 HOH WAT . I 3 HOH A 6 10006 67 HOH WAT . I 3 HOH A 7 10007 71 HOH WAT . I 3 HOH A 8 10008 59 HOH WAT . I 3 HOH A 9 10009 68 HOH WAT . I 3 HOH A 10 10010 26 HOH WAT . I 3 HOH A 11 10011 65 HOH WAT . I 3 HOH A 12 10012 40 HOH WAT . I 3 HOH A 13 10013 116 HOH WAT . I 3 HOH A 14 10014 70 HOH WAT . I 3 HOH A 15 10015 74 HOH WAT . I 3 HOH A 16 10016 14 HOH WAT . I 3 HOH A 17 10017 69 HOH WAT . I 3 HOH A 18 10018 30 HOH WAT . I 3 HOH A 19 10019 3 HOH WAT . I 3 HOH A 20 10020 72 HOH WAT . I 3 HOH A 21 10021 10 HOH WAT . I 3 HOH A 22 10022 73 HOH WAT . I 3 HOH A 23 10023 5 HOH WAT . J 3 HOH B 1 10001 88 HOH WAT . J 3 HOH B 2 10002 78 HOH WAT . J 3 HOH B 3 10003 82 HOH WAT . J 3 HOH B 4 10004 31 HOH WAT . J 3 HOH B 5 10005 81 HOH WAT . J 3 HOH B 6 10006 80 HOH WAT . J 3 HOH B 7 10007 83 HOH WAT . J 3 HOH B 8 10008 36 HOH WAT . J 3 HOH B 9 10009 33 HOH WAT . J 3 HOH B 10 10010 4 HOH WAT . J 3 HOH B 11 10011 122 HOH WAT . J 3 HOH B 12 10012 117 HOH WAT . J 3 HOH B 13 10013 51 HOH WAT . J 3 HOH B 14 10014 6 HOH WAT . J 3 HOH B 15 10015 85 HOH WAT . J 3 HOH B 16 10016 21 HOH WAT . J 3 HOH B 17 10017 60 HOH WAT . J 3 HOH B 18 10018 9 HOH WAT . J 3 HOH B 19 10019 13 HOH WAT . J 3 HOH B 20 10020 84 HOH WAT . J 3 HOH B 21 10021 79 HOH WAT . J 3 HOH B 22 10022 87 HOH WAT . J 3 HOH B 23 10023 17 HOH WAT . J 3 HOH B 24 10024 27 HOH WAT . K 3 HOH C 1 10001 89 HOH WAT . K 3 HOH C 2 10002 102 HOH WAT . K 3 HOH C 3 10003 96 HOH WAT . K 3 HOH C 4 10004 118 HOH WAT . K 3 HOH C 5 10005 19 HOH WAT . K 3 HOH C 6 10006 1 HOH WAT . K 3 HOH C 7 10007 92 HOH WAT . K 3 HOH C 8 10008 99 HOH WAT . K 3 HOH C 9 10009 56 HOH WAT . K 3 HOH C 10 10010 38 HOH WAT . K 3 HOH C 11 10011 100 HOH WAT . K 3 HOH C 12 10012 91 HOH WAT . K 3 HOH C 13 10013 101 HOH WAT . K 3 HOH C 14 10014 58 HOH WAT . K 3 HOH C 15 10015 93 HOH WAT . K 3 HOH C 16 10016 7 HOH WAT . K 3 HOH C 17 10017 103 HOH WAT . K 3 HOH C 18 10018 97 HOH WAT . K 3 HOH C 19 10019 50 HOH WAT . K 3 HOH C 20 10020 42 HOH WAT . K 3 HOH C 21 10021 90 HOH WAT . K 3 HOH C 22 10022 98 HOH WAT . K 3 HOH C 23 10023 94 HOH WAT . K 3 HOH C 24 10024 46 HOH WAT . K 3 HOH C 25 10025 34 HOH WAT . K 3 HOH C 26 10026 44 HOH WAT . K 3 HOH C 27 10027 18 HOH WAT . K 3 HOH C 28 10028 22 HOH WAT . K 3 HOH C 29 10029 20 HOH WAT . K 3 HOH C 30 10030 95 HOH WAT . K 3 HOH C 31 10031 41 HOH WAT . L 3 HOH D 1 10001 54 HOH WAT . L 3 HOH D 2 10002 115 HOH WAT . L 3 HOH D 3 10003 114 HOH WAT . L 3 HOH D 4 10004 109 HOH WAT . L 3 HOH D 5 10005 120 HOH WAT . L 3 HOH D 6 10006 113 HOH WAT . L 3 HOH D 7 10007 49 HOH WAT . L 3 HOH D 8 10008 61 HOH WAT . L 3 HOH D 9 10009 57 HOH WAT . L 3 HOH D 10 10010 121 HOH WAT . L 3 HOH D 11 10011 47 HOH WAT . L 3 HOH D 12 10012 108 HOH WAT . L 3 HOH D 13 10013 52 HOH WAT . L 3 HOH D 14 10014 106 HOH WAT . L 3 HOH D 15 10015 11 HOH WAT . L 3 HOH D 16 10016 2 HOH WAT . L 3 HOH D 17 10017 86 HOH WAT . L 3 HOH D 18 10018 119 HOH WAT . L 3 HOH D 19 10019 29 HOH WAT . L 3 HOH D 20 10020 112 HOH WAT . L 3 HOH D 21 10021 32 HOH WAT . L 3 HOH D 22 10022 53 HOH WAT . L 3 HOH D 23 10023 107 HOH WAT . L 3 HOH D 24 10024 37 HOH WAT . L 3 HOH D 25 10025 111 HOH WAT . L 3 HOH D 26 10026 8 HOH WAT . L 3 HOH D 27 10027 48 HOH WAT . L 3 HOH D 28 10028 105 HOH WAT . L 3 HOH D 29 10029 104 HOH WAT . L 3 HOH D 30 10030 110 HOH WAT . L 3 HOH D 31 10031 23 HOH WAT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 76Q . . . E 2 31.199 4.575 -7.89 1 72 ? N01 76Q 9901 A 1 HETATM 2 C C02 76Q . . . E 2 30.441 4.801 -6.843 1 75.26 ? C02 76Q 9901 A 1 HETATM 3 C C03 76Q . . . E 2 29.961 6.009 -6.364 1 75.74 ? C03 76Q 9901 A 1 HETATM 4 C C04 76Q . . . E 2 30.376 7.235 -7.182 1 72.66 ? C04 76Q 9901 A 1 HETATM 5 C C05 76Q . . . E 2 31.219 6.983 -8.339 1 70.29 ? C05 76Q 9901 A 1 HETATM 6 C C06 76Q . . . E 2 31.634 5.653 -8.608 1 69.65 ? C06 76Q 9901 A 1 HETATM 7 C C07 76Q . . . E 2 31.662 8.023 -9.23 1 68.97 ? C07 76Q 9901 A 1 HETATM 8 C C08 76Q . . . E 2 32.512 7.751 -10.314 1 67.68 ? C08 76Q 9901 A 1 HETATM 9 C C09 76Q . . . E 2 32.89 6.424 -10.533 1 67.33 ? C09 76Q 9901 A 1 HETATM 10 C C10 76Q . . . E 2 32.49 5.412 -9.709 1 69.04 ? C10 76Q 9901 A 1 HETATM 11 C C11 76Q . . . E 2 29.063 6.008 -5.168 1 77.89 ? C11 76Q 9901 A 1 HETATM 12 C C12 76Q . . . E 2 29.967 8.686 -6.898 1 71.75 ? C12 76Q 9901 A 1 HETATM 13 C C13 76Q . . . E 2 33.011 8.853 -11.201 1 65.87 ? C13 76Q 9901 A 1 HETATM 14 C C14 76Q . . . E 2 27.783 6.548 -5.252 1 78.46 ? C14 76Q 9901 A 1 HETATM 15 C C15 76Q . . . E 2 26.932 6.59 -4.153 1 77.92 ? C15 76Q 9901 A 1 HETATM 16 C C16 76Q . . . E 2 27.336 5.985 -2.986 1 77.14 ? C16 76Q 9901 A 1 HETATM 17 C C17 76Q . . . E 2 28.56 5.372 -2.868 1 76.37 ? C17 76Q 9901 A 1 HETATM 18 C C18 76Q . . . E 2 29.396 5.339 -3.985 1 77.22 ? C18 76Q 9901 A 1 HETATM 19 C C19 76Q . . . E 2 25.594 7.265 -4.23 1 77.5 ? C19 76Q 9901 A 1 HETATM 20 C C20 76Q . . . E 2 28.981 4.784 -1.55 1 74.18 ? C20 76Q 9901 A 1 HETATM 21 C C21 76Q . . . E 2 29.693 8.955 -5.428 1 71.54 ? C21 76Q 9901 A 1 HETATM 22 C C22 76Q . . . E 2 30.161 10.228 -4.809 1 71.26 ? C22 76Q 9901 A 1 HETATM 23 C C23 76Q . . . E 2 29.041 11.211 -4.562 1 71.58 ? C23 76Q 9901 A 1 HETATM 24 N N24 76Q . . . E 2 27.921 10.529 -3.844 1 72.29 ? N24 76Q 9901 A 1 HETATM 25 C C25 76Q . . . E 2 26.898 11.442 -3.325 1 71.34 ? C25 76Q 9901 A 1 HETATM 26 C C26 76Q . . . E 2 32.235 9.964 -11.51 1 67.33 ? C26 76Q 9901 A 1 HETATM 27 N N27 76Q . . . E 2 32.637 10.966 -12.299 1 68.15 ? N27 76Q 9901 A 1 HETATM 28 C C28 76Q . . . E 2 33.86 10.884 -12.834 1 66.92 ? C28 76Q 9901 A 1 HETATM 29 C C29 76Q . . . E 2 34.722 9.811 -12.612 1 64.54 ? C29 76Q 9901 A 1 HETATM 30 C C30 76Q . . . E 2 34.285 8.788 -11.778 1 63.79 ? C30 76Q 9901 A 1 HETATM 31 O O31 76Q . . . E 2 35.976 9.775 -13.172 1 61.15 ? O31 76Q 9901 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #