data_5T2Z # _model_server_result.job_id knwUo1eihcCwfbZTbxVN7g _model_server_result.datetime_utc '2024-10-10 07:27:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 5T2Z # _exptl.entry_id 5T2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5T2Z _cell.length_a 62.851 _cell.length_b 62.851 _cell.length_c 82.961 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 5T2Z _atom_sites.fract_transf_matrix[1][1] 0.015911 _atom_sites.fract_transf_matrix[1][2] 0.009186 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018372 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 B 1 201 201 017 017 . D 3 HOH A 1 101 86 HOH HOH . D 3 HOH A 2 102 48 HOH HOH . D 3 HOH A 3 103 43 HOH HOH . D 3 HOH A 4 104 35 HOH HOH . D 3 HOH A 5 105 85 HOH HOH . D 3 HOH A 6 106 24 HOH HOH . D 3 HOH A 7 107 20 HOH HOH . D 3 HOH A 8 108 46 HOH HOH . D 3 HOH A 9 109 79 HOH HOH . D 3 HOH A 10 110 74 HOH HOH . D 3 HOH A 11 111 1 HOH HOH . D 3 HOH A 12 112 54 HOH HOH . D 3 HOH A 13 113 81 HOH HOH . D 3 HOH A 14 114 63 HOH HOH . D 3 HOH A 15 115 27 HOH HOH . D 3 HOH A 16 116 37 HOH HOH . D 3 HOH A 17 117 3 HOH HOH . D 3 HOH A 18 118 17 HOH HOH . D 3 HOH A 19 119 8 HOH HOH . D 3 HOH A 20 120 18 HOH HOH . D 3 HOH A 21 121 68 HOH HOH . D 3 HOH A 22 122 45 HOH HOH . D 3 HOH A 23 123 39 HOH HOH . D 3 HOH A 24 124 32 HOH HOH . D 3 HOH A 25 125 75 HOH HOH . D 3 HOH A 26 126 53 HOH HOH . D 3 HOH A 27 127 72 HOH HOH . D 3 HOH A 28 128 28 HOH HOH . D 3 HOH A 29 129 31 HOH HOH . D 3 HOH A 30 130 61 HOH HOH . D 3 HOH A 31 131 5 HOH HOH . D 3 HOH A 32 132 13 HOH HOH . D 3 HOH A 33 133 11 HOH HOH . D 3 HOH A 34 134 90 HOH HOH . D 3 HOH A 35 135 50 HOH HOH . D 3 HOH A 36 136 29 HOH HOH . D 3 HOH A 37 137 16 HOH HOH . D 3 HOH A 38 138 64 HOH HOH . D 3 HOH A 39 139 82 HOH HOH . D 3 HOH A 40 140 23 HOH HOH . D 3 HOH A 41 141 92 HOH HOH . D 3 HOH A 42 142 41 HOH HOH . D 3 HOH A 43 143 60 HOH HOH . D 3 HOH A 44 144 59 HOH HOH . D 3 HOH A 45 145 83 HOH HOH . E 3 HOH B 1 301 89 HOH HOH . E 3 HOH B 2 302 88 HOH HOH . E 3 HOH B 3 303 19 HOH HOH . E 3 HOH B 4 304 87 HOH HOH . E 3 HOH B 5 305 78 HOH HOH . E 3 HOH B 6 306 80 HOH HOH . E 3 HOH B 7 307 15 HOH HOH . E 3 HOH B 8 308 38 HOH HOH . E 3 HOH B 9 309 42 HOH HOH . E 3 HOH B 10 310 14 HOH HOH . E 3 HOH B 11 311 44 HOH HOH . E 3 HOH B 12 312 76 HOH HOH . E 3 HOH B 13 313 30 HOH HOH . E 3 HOH B 14 314 25 HOH HOH . E 3 HOH B 15 315 91 HOH HOH . E 3 HOH B 16 316 73 HOH HOH . E 3 HOH B 17 317 2 HOH HOH . E 3 HOH B 18 318 34 HOH HOH . E 3 HOH B 19 319 12 HOH HOH . E 3 HOH B 20 320 6 HOH HOH . E 3 HOH B 21 321 66 HOH HOH . E 3 HOH B 22 322 4 HOH HOH . E 3 HOH B 23 323 70 HOH HOH . E 3 HOH B 24 324 49 HOH HOH . E 3 HOH B 25 325 65 HOH HOH . E 3 HOH B 26 326 55 HOH HOH . E 3 HOH B 27 327 7 HOH HOH . E 3 HOH B 28 328 69 HOH HOH . E 3 HOH B 29 329 77 HOH HOH . E 3 HOH B 30 330 9 HOH HOH . E 3 HOH B 31 331 10 HOH HOH . E 3 HOH B 32 332 47 HOH HOH . E 3 HOH B 33 333 40 HOH HOH . E 3 HOH B 34 334 51 HOH HOH . E 3 HOH B 35 335 26 HOH HOH . E 3 HOH B 36 336 33 HOH HOH . E 3 HOH B 37 337 71 HOH HOH . E 3 HOH B 38 338 57 HOH HOH . E 3 HOH B 39 339 84 HOH HOH . E 3 HOH B 40 340 21 HOH HOH . E 3 HOH B 41 341 67 HOH HOH . E 3 HOH B 42 342 52 HOH HOH . E 3 HOH B 43 343 56 HOH HOH . E 3 HOH B 44 344 58 HOH HOH . E 3 HOH B 45 345 62 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . A . C 2 21.333 37.962 -8.768 0.5 30.14 ? N1 017 201 B 1 HETATM 2 N N1 017 . B . C 2 22.221 37.526 6.676 0.5 31.45 ? N1 017 201 B 1 HETATM 3 C C2 017 . A . C 2 21.538 38.255 -7.455 0.5 25.04 ? C2 017 201 B 1 HETATM 4 C C2 017 . B . C 2 22.404 37.833 5.376 0.5 26.7 ? C2 017 201 B 1 HETATM 5 C C3 017 . A . C 2 22.34 37.376 -6.73 0.5 26.68 ? C3 017 201 B 1 HETATM 6 C C3 017 . B . C 2 21.255 38.055 4.627 0.5 28.67 ? C3 017 201 B 1 HETATM 7 C C4 017 . A . C 2 22.605 37.679 -5.425 0.5 23.95 ? C4 017 201 B 1 HETATM 8 C C4 017 . B . C 2 21.355 38.405 3.321 0.5 26.23 ? C4 017 201 B 1 HETATM 9 C C5 017 . A . C 2 22.018 38.794 -4.785 0.5 25.17 ? C5 017 201 B 1 HETATM 10 C C5 017 . B . C 2 22.617 38.465 2.699 0.5 25.62 ? C5 017 201 B 1 HETATM 11 C C6 017 . A . C 2 21.205 39.649 -5.522 0.5 27.78 ? C6 017 201 B 1 HETATM 12 C C6 017 . B . C 2 23.774 38.225 3.44 0.5 27.29 ? C6 017 201 B 1 HETATM 13 C C7 017 . A . C 2 20.952 39.38 -6.857 0.5 26.39 ? C7 017 201 B 1 HETATM 14 C C7 017 . B . C 2 23.671 37.915 4.804 0.5 27.88 ? C7 017 201 B 1 HETATM 15 S S8 017 . A . C 2 22.278 39.075 -3.188 0.5 26.33 ? S8 017 201 B 1 HETATM 16 S S8 017 . B . C 2 22.692 38.806 1.105 0.5 27.59 ? S8 017 201 B 1 HETATM 17 O O9 017 . A . C 2 23.448 38.374 -2.779 0.5 30.31 ? O9 017 201 B 1 HETATM 18 O O9 017 . B . C 2 21.516 39.509 0.751 0.5 30.31 ? O9 017 201 B 1 HETATM 19 O O10 017 . A . C 2 22.117 40.467 -2.967 0.5 26.34 ? O10 017 201 B 1 HETATM 20 O O10 017 . B . C 2 23.913 39.428 0.848 0.5 28.42 ? O10 017 201 B 1 HETATM 21 N N11 017 . A . C 2 21.011 38.436 -2.475 0.5 26.13 ? N11 017 201 B 1 HETATM 22 N N11 017 . B . C 2 22.764 37.396 0.405 0.5 25.69 ? N11 017 201 B 1 HETATM 23 C C12 017 . A . C 2 19.739 39.142 -2.537 0.5 26.51 ? C12 017 201 B 1 HETATM 24 C C12 017 . B . C 2 24.036 36.704 0.444 0.5 27.43 ? C12 017 201 B 1 HETATM 25 C C13 017 . A . C 2 18.948 39.215 -1.233 0.5 27.32 ? C13 017 201 B 1 HETATM 26 C C13 017 . B . C 2 24.458 36.051 -0.852 0.5 27.99 ? C13 017 201 B 1 HETATM 27 C C14 017 . A . C 2 19.641 40.128 -0.219 0.5 25.83 ? C14 017 201 B 1 HETATM 28 C C14 017 . B . C 2 24.922 37.069 -1.893 0.5 28.29 ? C14 017 201 B 1 HETATM 29 C C15 017 . A . C 2 17.583 39.728 -1.648 0.5 29.42 ? C15 017 201 B 1 HETATM 30 C C15 017 . B . C 2 25.563 35.111 -0.358 0.5 28.87 ? C15 017 201 B 1 HETATM 31 C C16 017 . A . C 2 20.99 36.993 -2.185 0.5 25.44 ? C16 017 201 B 1 HETATM 32 C C16 017 . B . C 2 21.524 36.648 0.132 0.5 24.73 ? C16 017 201 B 1 HETATM 33 C C17 017 . A . C 2 21.19 36.634 -0.734 0.5 20.65 ? C17 017 201 B 1 HETATM 34 C C17 017 . B . C 2 21.064 36.639 -1.316 0.5 21.41 ? C17 017 201 B 1 HETATM 35 O O18 017 . A . C 2 20.848 35.277 -0.573 0.5 22.91 ? O18 017 201 B 1 HETATM 36 O O18 017 . B . C 2 20.003 35.725 -1.474 0.5 22.71 ? O18 017 201 B 1 HETATM 37 C C19 017 . A . C 2 22.633 36.805 -0.238 0.5 21.23 ? C19 017 201 B 1 HETATM 38 C C19 017 . B . C 2 20.59 37.994 -1.85 0.5 20.48 ? C19 017 201 B 1 HETATM 39 N N20 017 . A . C 2 22.579 36.593 1.192 0.5 22.23 ? N20 017 201 B 1 HETATM 40 N N20 017 . B . C 2 20.47 37.816 -3.274 0.5 21.46 ? N20 017 201 B 1 HETATM 41 C C21 017 . A . C 2 22.673 37.616 2.056 0.5 21.5 ? C21 017 201 B 1 HETATM 42 C C21 017 . B . C 2 21.268 38.437 -4.147 0.5 21.12 ? C21 017 201 B 1 HETATM 43 O O22 017 . A . C 2 22.823 38.813 1.752 0.5 23.51 ? O22 017 201 B 1 HETATM 44 O O22 017 . B . C 2 22.189 39.219 -3.897 0.5 24.67 ? O22 017 201 B 1 HETATM 45 O O23 017 . A . C 2 22.554 37.206 3.39 0.5 21.29 ? O23 017 201 B 1 HETATM 46 O O23 017 . B . C 2 20.961 38.117 -5.468 0.5 21.71 ? O23 017 201 B 1 HETATM 47 C C24 017 . A . C 2 23.018 38.085 4.43 0.5 22.34 ? C24 017 201 B 1 HETATM 48 C C24 017 . B . C 2 21.521 38.941 -6.498 0.5 22.77 ? C24 017 201 B 1 HETATM 49 C C25 017 . A . C 2 22.024 37.831 5.528 0.5 22.8 ? C25 017 201 B 1 HETATM 50 C C25 017 . B . C 2 21.77 37.975 -7.618 0.5 24.51 ? C25 017 201 B 1 HETATM 51 O O26 017 . A . C 2 22.452 36.636 6.174 0.5 21.44 ? O26 017 201 B 1 HETATM 52 O O26 017 . B . C 2 20.501 37.745 -8.224 0.5 21.65 ? O26 017 201 B 1 HETATM 53 C C27 017 . A . C 2 23.93 36.618 6.08 0.5 21.15 ? C27 017 201 B 1 HETATM 54 C C27 017 . B . C 2 19.782 39.047 -8.16 0.5 20.07 ? C27 017 201 B 1 HETATM 55 O O28 017 . A . C 2 24.342 35.355 5.553 0.5 22.09 ? O28 017 201 B 1 HETATM 56 O O28 017 . B . C 2 18.472 38.76 -7.617 0.5 20.94 ? O28 017 201 B 1 HETATM 57 C C29 017 . A . C 2 24.811 35.572 4.198 0.5 22.9 ? C29 017 201 B 1 HETATM 58 C C29 017 . B . C 2 18.426 39.249 -6.219 0.5 23.37 ? C29 017 201 B 1 HETATM 59 C C30 017 . A . C 2 25.278 37.027 4.137 0.5 24.36 ? C30 017 201 B 1 HETATM 60 C C30 017 . B . C 2 19.434 40.406 -6.164 0.5 21.94 ? C30 017 201 B 1 HETATM 61 C C31 017 . A . C 2 24.325 37.683 5.102 0.5 23.21 ? C31 017 201 B 1 HETATM 62 C C31 017 . B . C 2 20.51 39.882 -7.13 0.5 22.18 ? C31 017 201 B 1 HETATM 63 C C32 017 . A . C 2 23.615 35.767 -0.796 0.5 21.94 ? C32 017 201 B 1 HETATM 64 C C32 017 . B . C 2 19.176 38.345 -1.256 0.5 22.71 ? C32 017 201 B 1 HETATM 65 C C33 017 . A . C 2 25.586 35.199 0.601 0.5 22.51 ? C33 017 201 B 1 HETATM 66 C C33 017 . B . C 2 17.67 39.743 -2.604 0.5 21.5 ? C33 017 201 B 1 HETATM 67 C C34 017 . A . C 2 26.797 35.474 1.22 0.5 23.6 ? C34 017 201 B 1 HETATM 68 C C34 017 . B . C 2 17.345 40.9 -3.248 0.5 21.77 ? C34 017 201 B 1 HETATM 69 C C35 017 . A . C 2 27.441 36.737 1.057 0.5 25.28 ? C35 017 201 B 1 HETATM 70 C C35 017 . B . C 2 18.126 42.108 -3.09 0.5 23.59 ? C35 017 201 B 1 HETATM 71 C C36 017 . A . C 2 26.832 37.641 0.229 0.5 22.77 ? C36 017 201 B 1 HETATM 72 C C36 017 . B . C 2 19.228 42.035 -2.317 0.5 23.16 ? C36 017 201 B 1 HETATM 73 C C37 017 . A . C 2 25.581 37.363 -0.36 0.5 24.08 ? C37 017 201 B 1 HETATM 74 C C37 017 . B . C 2 19.612 40.827 -1.731 0.5 22.8 ? C37 017 201 B 1 HETATM 75 C C38 017 . A . C 2 24.943 36.13 -0.192 0.5 22.41 ? C38 017 201 B 1 HETATM 76 C C38 017 . B . C 2 18.812 39.675 -1.86 0.5 22.97 ? C38 017 201 B 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 21 _model_server_stats.element_count 76 #