data_5T37 # _model_server_result.job_id 6jfGzzVoUw6DUp1vz6ZYSw _model_server_result.datetime_utc '2024-11-27 19:13:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 5T37 # _exptl.entry_id 5T37 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 334.801 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-chloro-5-{[(2,2-dimethylpropanoyl)amino]methyl}-N-(1H-imidazol-2-yl)benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5T37 _cell.length_a 76.24 _cell.length_b 76.24 _cell.length_c 124.098 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C16 H19 Cl N4 O2' _chem_comp.formula_weight 334.801 _chem_comp.id 758 _chem_comp.mon_nstd_flag . _chem_comp.name 2-chloro-5-{[(2,2-dimethylpropanoyl)amino]methyl}-N-(1H-imidazol-2-yl)benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C16 758 sing 1 n n C12 C16 758 sing 2 n n C13 C16 758 sing 3 n n C16 C11 758 sing 4 n n C4 N17 758 sing 5 n y C4 C5 758 doub 6 n y N17 C9 758 sing 7 n y C11 O22 758 doub 8 n n C11 N20 758 sing 9 n n C5 N18 758 sing 10 n y C9 N19 758 sing 11 n n C9 N18 758 doub 12 n y N20 C15 758 sing 13 n n N19 C10 758 sing 14 n n C15 C7 758 sing 15 n n C3 C7 758 doub 16 n y C3 C6 758 sing 17 n y C10 C6 758 sing 18 n n C10 O21 758 doub 19 n n C7 C1 758 sing 20 n y C6 C8 758 doub 21 n y C1 C2 758 doub 22 n y C8 C2 758 sing 23 n y C8 CL23 758 sing 24 n n C1 H1 758 sing 25 n n C5 H2 758 sing 26 n n C4 H3 758 sing 27 n n C3 H4 758 sing 28 n n C2 H5 758 sing 29 n n C12 H6 758 sing 30 n n C12 H7 758 sing 31 n n C12 H8 758 sing 32 n n C13 H9 758 sing 33 n n C13 H10 758 sing 34 n n C13 H11 758 sing 35 n n C14 H12 758 sing 36 n n C14 H13 758 sing 37 n n C14 H14 758 sing 38 n n C15 H15 758 sing 39 n n C15 H16 758 sing 40 n n N17 H17 758 sing 41 n n N19 H19 758 sing 42 n n N20 H20 758 sing 43 n n # _atom_sites.entry_id 5T37 _atom_sites.fract_transf_matrix[1][1] 0.013116 _atom_sites.fract_transf_matrix[1][2] 0.007573 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008058 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 758 A 1 201 1 758 SX1 . C 3 GSH A 1 202 1 GSH GTT . D 4 BOG A 1 203 2 BOG BOG . E 4 BOG A 1 204 3 BOG BOG . F 5 PG4 A 1 205 4 PG4 PG4 . G 5 PG4 A 1 206 5 PG4 PG4 . H 5 PG4 A 1 207 8 PG4 PG4 . I 6 HOH A 1 301 68 HOH HOH . I 6 HOH A 2 302 62 HOH HOH . I 6 HOH A 3 303 15 HOH HOH . I 6 HOH A 4 304 32 HOH HOH . I 6 HOH A 5 305 36 HOH HOH . I 6 HOH A 6 306 17 HOH HOH . I 6 HOH A 7 307 46 HOH HOH . I 6 HOH A 8 308 77 HOH HOH . I 6 HOH A 9 309 52 HOH HOH . I 6 HOH A 10 310 96 HOH HOH . I 6 HOH A 11 311 43 HOH HOH . I 6 HOH A 12 312 24 HOH HOH . I 6 HOH A 13 313 35 HOH HOH . I 6 HOH A 14 314 9 HOH HOH . I 6 HOH A 15 315 75 HOH HOH . I 6 HOH A 16 316 41 HOH HOH . I 6 HOH A 17 317 18 HOH HOH . I 6 HOH A 18 318 64 HOH HOH . I 6 HOH A 19 319 84 HOH HOH . I 6 HOH A 20 320 112 HOH HOH . I 6 HOH A 21 321 70 HOH HOH . I 6 HOH A 22 322 23 HOH HOH . I 6 HOH A 23 323 13 HOH HOH . I 6 HOH A 24 324 51 HOH HOH . I 6 HOH A 25 325 21 HOH HOH . I 6 HOH A 26 326 28 HOH HOH . I 6 HOH A 27 327 44 HOH HOH . I 6 HOH A 28 328 49 HOH HOH . I 6 HOH A 29 329 59 HOH HOH . I 6 HOH A 30 330 83 HOH HOH . I 6 HOH A 31 331 19 HOH HOH . I 6 HOH A 32 332 80 HOH HOH . I 6 HOH A 33 333 50 HOH HOH . I 6 HOH A 34 334 31 HOH HOH . I 6 HOH A 35 335 117 HOH HOH . I 6 HOH A 36 336 61 HOH HOH . I 6 HOH A 37 337 22 HOH HOH . I 6 HOH A 38 338 42 HOH HOH . I 6 HOH A 39 339 72 HOH HOH . I 6 HOH A 40 340 14 HOH HOH . I 6 HOH A 41 341 79 HOH HOH . I 6 HOH A 42 342 16 HOH HOH . I 6 HOH A 43 343 67 HOH HOH . I 6 HOH A 44 344 4 HOH HOH . I 6 HOH A 45 345 39 HOH HOH . I 6 HOH A 46 346 30 HOH HOH . I 6 HOH A 47 347 27 HOH HOH . I 6 HOH A 48 348 38 HOH HOH . I 6 HOH A 49 349 12 HOH HOH . I 6 HOH A 50 350 53 HOH HOH . I 6 HOH A 51 351 90 HOH HOH . I 6 HOH A 52 352 74 HOH HOH . I 6 HOH A 53 353 58 HOH HOH . I 6 HOH A 54 354 63 HOH HOH . I 6 HOH A 55 355 57 HOH HOH . I 6 HOH A 56 356 48 HOH HOH . I 6 HOH A 57 357 102 HOH HOH . I 6 HOH A 58 358 37 HOH HOH . I 6 HOH A 59 359 128 HOH HOH . I 6 HOH A 60 360 45 HOH HOH . I 6 HOH A 61 361 26 HOH HOH . I 6 HOH A 62 362 114 HOH HOH . I 6 HOH A 63 363 86 HOH HOH . I 6 HOH A 64 364 25 HOH HOH . I 6 HOH A 65 365 56 HOH HOH . I 6 HOH A 66 366 100 HOH HOH . I 6 HOH A 67 367 29 HOH HOH . I 6 HOH A 68 368 40 HOH HOH . I 6 HOH A 69 369 81 HOH HOH . I 6 HOH A 70 370 119 HOH HOH . I 6 HOH A 71 371 47 HOH HOH . I 6 HOH A 72 372 97 HOH HOH . I 6 HOH A 73 373 11 HOH HOH . I 6 HOH A 74 374 120 HOH HOH . I 6 HOH A 75 375 20 HOH HOH . I 6 HOH A 76 376 33 HOH HOH . I 6 HOH A 77 377 113 HOH HOH . I 6 HOH A 78 378 94 HOH HOH . I 6 HOH A 79 379 91 HOH HOH . I 6 HOH A 80 380 69 HOH HOH . I 6 HOH A 81 381 129 HOH HOH . I 6 HOH A 82 382 76 HOH HOH . I 6 HOH A 83 383 85 HOH HOH . I 6 HOH A 84 384 60 HOH HOH . I 6 HOH A 85 385 71 HOH HOH . I 6 HOH A 86 386 66 HOH HOH . I 6 HOH A 87 387 121 HOH HOH . I 6 HOH A 88 388 130 HOH HOH . I 6 HOH A 89 389 124 HOH HOH . I 6 HOH A 90 390 5 HOH HOH . I 6 HOH A 91 391 88 HOH HOH . I 6 HOH A 92 392 93 HOH HOH . I 6 HOH A 93 393 34 HOH HOH . I 6 HOH A 94 394 78 HOH HOH . I 6 HOH A 95 395 105 HOH HOH . I 6 HOH A 96 396 95 HOH HOH . I 6 HOH A 97 397 7 HOH HOH . I 6 HOH A 98 398 101 HOH HOH . I 6 HOH A 99 399 98 HOH HOH . I 6 HOH A 100 400 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C7 758 . . . B 2 10.773 14.419 33.006 1 21.94 ? C7 758 201 A 1 HETATM 2 C C6 758 . . . B 2 13.142 14.862 33.205 1 22.36 ? C6 758 201 A 1 HETATM 3 C C1 758 . . . B 2 10.895 13.347 33.892 1 21.24 ? C1 758 201 A 1 HETATM 4 C C5 758 . . . B 2 17.188 17.951 30.554 1 28.07 ? C5 758 201 A 1 HETATM 5 C C4 758 . . . B 2 16.67 17.616 29.325 1 27.25 ? C4 758 201 A 1 HETATM 6 C C3 758 . . . B 2 11.895 15.175 32.664 1 23.21 ? C3 758 201 A 1 HETATM 7 C C2 758 . . . B 2 12.142 13.033 34.435 1 22.18 ? C2 758 201 A 1 HETATM 8 C C8 758 . . . B 2 13.264 13.791 34.094 1 24.43 ? C8 758 201 A 1 HETATM 9 C C9 758 . . . B 2 15.425 16.641 30.753 1 27.29 ? C9 758 201 A 1 HETATM 10 C C10 758 . . . B 2 14.271 15.7 32.81 1 27.16 ? C10 758 201 A 1 HETATM 11 C C11 758 . . . B 2 8.974 15.699 30.174 1 24.48 ? C11 758 201 A 1 HETATM 12 C C12 758 . . . B 2 10.449 15.012 28.232 1 25.33 ? C12 758 201 A 1 HETATM 13 C C13 758 . . . B 2 8.045 14.321 28.283 1 28.35 ? C13 758 201 A 1 HETATM 14 C C14 758 . . . B 2 8.622 16.711 27.889 1 28.41 ? C14 758 201 A 1 HETATM 15 C C15 758 . . . B 2 9.436 14.759 32.414 1 22.4 ? C15 758 201 A 1 HETATM 16 C C16 758 . . . B 2 9.034 15.441 28.651 1 26.41 ? C16 758 201 A 1 HETATM 17 N N17 758 . . . B 2 15.572 16.799 29.455 1 26.29 ? N17 758 201 A 1 HETATM 18 N N18 758 . . . B 2 16.381 17.322 31.459 1 26.65 ? N18 758 201 A 1 HETATM 19 N N19 758 . . . B 2 14.434 15.881 31.428 1 23.89 ? N19 758 201 A 1 HETATM 20 N N20 758 . . . B 2 9.434 14.66 30.97 1 22.72 ? N20 758 201 A 1 HETATM 21 O O21 758 . . . B 2 15.014 16.22 33.652 1 29.17 ? O21 758 201 A 1 HETATM 22 O O22 758 . . . B 2 8.544 16.753 30.635 1 26.35 ? O22 758 201 A 1 HETATM 23 CL CL23 758 . . . B 2 14.783 13.355 34.796 0.75 29.72 ? CL23 758 201 A 1 # _model_server_stats.io_time_ms 60 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 23 #