data_5T37 # _model_server_result.job_id ZuC6OiQLh3RB-oDuhUkM-Q _model_server_result.datetime_utc '2024-11-08 12:56:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t37 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":206}' # _entry.id 5T37 # _exptl.entry_id 5T37 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5T37 _cell.length_a 76.24 _cell.length_b 76.24 _cell.length_c 124.098 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T37 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 F N N ? 5 G N N ? 5 H N N # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 364 n n O1 HO1 PG4 sing 365 n n C1 C2 PG4 sing 366 n n C1 H11 PG4 sing 367 n n C1 H12 PG4 sing 368 n n C2 O2 PG4 sing 369 n n C2 H21 PG4 sing 370 n n C2 H22 PG4 sing 371 n n O2 C3 PG4 sing 372 n n C3 C4 PG4 sing 373 n n C3 H31 PG4 sing 374 n n C3 H32 PG4 sing 375 n n C4 O3 PG4 sing 376 n n C4 H41 PG4 sing 377 n n C4 H42 PG4 sing 378 n n O3 C5 PG4 sing 379 n n C5 C6 PG4 sing 380 n n C5 H51 PG4 sing 381 n n C5 H52 PG4 sing 382 n n C6 O4 PG4 sing 383 n n C6 H61 PG4 sing 384 n n C6 H62 PG4 sing 385 n n O4 C7 PG4 sing 386 n n C7 C8 PG4 sing 387 n n C7 H71 PG4 sing 388 n n C7 H72 PG4 sing 389 n n C8 O5 PG4 sing 390 n n C8 H81 PG4 sing 391 n n C8 H82 PG4 sing 392 n n O5 HO5 PG4 sing 393 n n # _atom_sites.entry_id 5T37 _atom_sites.fract_transf_matrix[1][1] 0.013116 _atom_sites.fract_transf_matrix[1][2] 0.007573 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015146 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008058 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 758 A 1 201 1 758 SX1 . C 3 GSH A 1 202 1 GSH GTT . D 4 BOG A 1 203 2 BOG BOG . E 4 BOG A 1 204 3 BOG BOG . F 5 PG4 A 1 205 4 PG4 PG4 . G 5 PG4 A 1 206 5 PG4 PG4 . H 5 PG4 A 1 207 8 PG4 PG4 . I 6 HOH A 1 301 68 HOH HOH . I 6 HOH A 2 302 62 HOH HOH . I 6 HOH A 3 303 15 HOH HOH . I 6 HOH A 4 304 32 HOH HOH . I 6 HOH A 5 305 36 HOH HOH . I 6 HOH A 6 306 17 HOH HOH . I 6 HOH A 7 307 46 HOH HOH . I 6 HOH A 8 308 77 HOH HOH . I 6 HOH A 9 309 52 HOH HOH . I 6 HOH A 10 310 96 HOH HOH . I 6 HOH A 11 311 43 HOH HOH . I 6 HOH A 12 312 24 HOH HOH . I 6 HOH A 13 313 35 HOH HOH . I 6 HOH A 14 314 9 HOH HOH . I 6 HOH A 15 315 75 HOH HOH . I 6 HOH A 16 316 41 HOH HOH . I 6 HOH A 17 317 18 HOH HOH . I 6 HOH A 18 318 64 HOH HOH . I 6 HOH A 19 319 84 HOH HOH . I 6 HOH A 20 320 112 HOH HOH . I 6 HOH A 21 321 70 HOH HOH . I 6 HOH A 22 322 23 HOH HOH . I 6 HOH A 23 323 13 HOH HOH . I 6 HOH A 24 324 51 HOH HOH . I 6 HOH A 25 325 21 HOH HOH . I 6 HOH A 26 326 28 HOH HOH . I 6 HOH A 27 327 44 HOH HOH . I 6 HOH A 28 328 49 HOH HOH . I 6 HOH A 29 329 59 HOH HOH . I 6 HOH A 30 330 83 HOH HOH . I 6 HOH A 31 331 19 HOH HOH . I 6 HOH A 32 332 80 HOH HOH . I 6 HOH A 33 333 50 HOH HOH . I 6 HOH A 34 334 31 HOH HOH . I 6 HOH A 35 335 117 HOH HOH . I 6 HOH A 36 336 61 HOH HOH . I 6 HOH A 37 337 22 HOH HOH . I 6 HOH A 38 338 42 HOH HOH . I 6 HOH A 39 339 72 HOH HOH . I 6 HOH A 40 340 14 HOH HOH . I 6 HOH A 41 341 79 HOH HOH . I 6 HOH A 42 342 16 HOH HOH . I 6 HOH A 43 343 67 HOH HOH . I 6 HOH A 44 344 4 HOH HOH . I 6 HOH A 45 345 39 HOH HOH . I 6 HOH A 46 346 30 HOH HOH . I 6 HOH A 47 347 27 HOH HOH . I 6 HOH A 48 348 38 HOH HOH . I 6 HOH A 49 349 12 HOH HOH . I 6 HOH A 50 350 53 HOH HOH . I 6 HOH A 51 351 90 HOH HOH . I 6 HOH A 52 352 74 HOH HOH . I 6 HOH A 53 353 58 HOH HOH . I 6 HOH A 54 354 63 HOH HOH . I 6 HOH A 55 355 57 HOH HOH . I 6 HOH A 56 356 48 HOH HOH . I 6 HOH A 57 357 102 HOH HOH . I 6 HOH A 58 358 37 HOH HOH . I 6 HOH A 59 359 128 HOH HOH . I 6 HOH A 60 360 45 HOH HOH . I 6 HOH A 61 361 26 HOH HOH . I 6 HOH A 62 362 114 HOH HOH . I 6 HOH A 63 363 86 HOH HOH . I 6 HOH A 64 364 25 HOH HOH . I 6 HOH A 65 365 56 HOH HOH . I 6 HOH A 66 366 100 HOH HOH . I 6 HOH A 67 367 29 HOH HOH . I 6 HOH A 68 368 40 HOH HOH . I 6 HOH A 69 369 81 HOH HOH . I 6 HOH A 70 370 119 HOH HOH . I 6 HOH A 71 371 47 HOH HOH . I 6 HOH A 72 372 97 HOH HOH . I 6 HOH A 73 373 11 HOH HOH . I 6 HOH A 74 374 120 HOH HOH . I 6 HOH A 75 375 20 HOH HOH . I 6 HOH A 76 376 33 HOH HOH . I 6 HOH A 77 377 113 HOH HOH . I 6 HOH A 78 378 94 HOH HOH . I 6 HOH A 79 379 91 HOH HOH . I 6 HOH A 80 380 69 HOH HOH . I 6 HOH A 81 381 129 HOH HOH . I 6 HOH A 82 382 76 HOH HOH . I 6 HOH A 83 383 85 HOH HOH . I 6 HOH A 84 384 60 HOH HOH . I 6 HOH A 85 385 71 HOH HOH . I 6 HOH A 86 386 66 HOH HOH . I 6 HOH A 87 387 121 HOH HOH . I 6 HOH A 88 388 130 HOH HOH . I 6 HOH A 89 389 124 HOH HOH . I 6 HOH A 90 390 5 HOH HOH . I 6 HOH A 91 391 88 HOH HOH . I 6 HOH A 92 392 93 HOH HOH . I 6 HOH A 93 393 34 HOH HOH . I 6 HOH A 94 394 78 HOH HOH . I 6 HOH A 95 395 105 HOH HOH . I 6 HOH A 96 396 95 HOH HOH . I 6 HOH A 97 397 7 HOH HOH . I 6 HOH A 98 398 101 HOH HOH . I 6 HOH A 99 399 98 HOH HOH . I 6 HOH A 100 400 116 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . G 5 15.942 -3.696 35.278 1 34.54 ? O1 PG4 206 A 1 HETATM 2 C C1 PG4 . . . G 5 16.291 -5.034 34.905 1 34.98 ? C1 PG4 206 A 1 HETATM 3 C C2 PG4 . . . G 5 17.081 -5.004 33.603 1 38.94 ? C2 PG4 206 A 1 HETATM 4 O O2 PG4 . . . G 5 17.771 -6.241 33.434 1 44.14 ? O2 PG4 206 A 1 HETATM 5 C C3 PG4 . . . G 5 18.562 -6.251 32.247 1 46.29 ? C3 PG4 206 A 1 HETATM 6 C C4 PG4 . . . G 5 19.387 -7.532 32.199 1 50.36 ? C4 PG4 206 A 1 HETATM 7 O O3 PG4 . . . G 5 19.765 -7.805 30.851 1 54.44 ? O3 PG4 206 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 7 #