data_5T3F
#
_model_server_result.job_id            uLutMroe90xTp3SYWzu48Q 
_model_server_result.datetime_utc      '2024-11-25 02:45:24' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t3f 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":202}' 
#
_entry.id    5T3F 
#
_exptl.entry_id    5T3F 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              123.016 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            selenourea 
_entity.pdbx_number_of_molecules    9 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5T3F 
_cell.length_a            77.37 
_cell.length_b            77.37 
_cell.length_c            37.306 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5T3F 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
#
_chem_comp.formula           'C H4 N2 Se' 
_chem_comp.formula_weight    123.016 
_chem_comp.id                SEY 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              selenourea 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
SE C SEY doub 290 n n 
N2 C SEY sing 291 n n 
C N1 SEY sing 292 n n 
N2 H2 SEY sing 293 n n 
N1 H3 SEY sing 294 n n 
N1 H4 SEY sing 295 n n 
N2 H1 SEY sing 296 n n 
#
_atom_sites.entry_id                     5T3F 
_atom_sites.fract_transf_matrix[1][1]    0.012925 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012925 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026805 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SEY A 1 201 1 SEY SEU . 
C 2 SEY A 1 202 2 SEY SEU . 
D 2 SEY A 1 203 3 SEY SEU . 
E 2 SEY A 1 204 4 SEY SEU . 
F 2 SEY A 1 205 5 SEY SEU . 
G 2 SEY A 1 206 6 SEY SEU . 
H 2 SEY A 1 207 7 SEY SEU . 
I 2 SEY A 1 208 8 SEY SEU . 
J 2 SEY A 1 209 9 SEY SEU . 
K 3 HOH A 1 301 120 HOH HOH . 
K 3 HOH A 2 302 104 HOH HOH . 
K 3 HOH A 3 303 114 HOH HOH . 
K 3 HOH A 4 304 17 HOH HOH . 
K 3 HOH A 5 305 30 HOH HOH . 
K 3 HOH A 6 306 89 HOH HOH . 
K 3 HOH A 7 307 23 HOH HOH . 
K 3 HOH A 8 308 51 HOH HOH . 
K 3 HOH A 9 309 99 HOH HOH . 
K 3 HOH A 10 310 113 HOH HOH . 
K 3 HOH A 11 311 83 HOH HOH . 
K 3 HOH A 12 312 70 HOH HOH . 
K 3 HOH A 13 313 107 HOH HOH . 
K 3 HOH A 14 314 50 HOH HOH . 
K 3 HOH A 15 315 41 HOH HOH . 
K 3 HOH A 16 316 40 HOH HOH . 
K 3 HOH A 17 317 110 HOH HOH . 
K 3 HOH A 18 318 75 HOH HOH . 
K 3 HOH A 19 319 57 HOH HOH . 
K 3 HOH A 20 320 64 HOH HOH . 
K 3 HOH A 21 321 3 HOH HOH . 
K 3 HOH A 22 322 60 HOH HOH . 
K 3 HOH A 23 323 14 HOH HOH . 
K 3 HOH A 24 324 122 HOH HOH . 
K 3 HOH A 25 325 82 HOH HOH . 
K 3 HOH A 26 326 72 HOH HOH . 
K 3 HOH A 27 327 92 HOH HOH . 
K 3 HOH A 28 328 88 HOH HOH . 
K 3 HOH A 29 329 7 HOH HOH . 
K 3 HOH A 30 330 98 HOH HOH . 
K 3 HOH A 31 331 2 HOH HOH . 
K 3 HOH A 32 332 12 HOH HOH . 
K 3 HOH A 33 333 15 HOH HOH . 
K 3 HOH A 34 334 32 HOH HOH . 
K 3 HOH A 35 335 34 HOH HOH . 
K 3 HOH A 36 336 81 HOH HOH . 
K 3 HOH A 37 337 111 HOH HOH . 
K 3 HOH A 38 338 55 HOH HOH . 
K 3 HOH A 39 339 108 HOH HOH . 
K 3 HOH A 40 340 76 HOH HOH . 
K 3 HOH A 41 341 52 HOH HOH . 
K 3 HOH A 42 342 45 HOH HOH . 
K 3 HOH A 43 343 9 HOH HOH . 
K 3 HOH A 44 344 80 HOH HOH . 
K 3 HOH A 45 345 20 HOH HOH . 
K 3 HOH A 46 346 58 HOH HOH . 
K 3 HOH A 47 347 46 HOH HOH . 
K 3 HOH A 48 348 29 HOH HOH . 
K 3 HOH A 49 349 47 HOH HOH . 
K 3 HOH A 50 350 24 HOH HOH . 
K 3 HOH A 51 351 62 HOH HOH . 
K 3 HOH A 52 352 105 HOH HOH . 
K 3 HOH A 53 353 53 HOH HOH . 
K 3 HOH A 54 354 27 HOH HOH . 
K 3 HOH A 55 355 21 HOH HOH . 
K 3 HOH A 56 356 16 HOH HOH . 
K 3 HOH A 57 357 38 HOH HOH . 
K 3 HOH A 58 358 84 HOH HOH . 
K 3 HOH A 59 359 4 HOH HOH . 
K 3 HOH A 60 360 124 HOH HOH . 
K 3 HOH A 61 361 71 HOH HOH . 
K 3 HOH A 62 362 44 HOH HOH . 
K 3 HOH A 63 363 8 HOH HOH . 
K 3 HOH A 64 364 31 HOH HOH . 
K 3 HOH A 65 365 106 HOH HOH . 
K 3 HOH A 66 366 39 HOH HOH . 
K 3 HOH A 67 367 59 HOH HOH . 
K 3 HOH A 68 368 123 HOH HOH . 
K 3 HOH A 69 369 1 HOH HOH . 
K 3 HOH A 70 370 48 HOH HOH . 
K 3 HOH A 71 371 86 HOH HOH . 
K 3 HOH A 72 372 101 HOH HOH . 
K 3 HOH A 73 373 22 HOH HOH . 
K 3 HOH A 74 374 35 HOH HOH . 
K 3 HOH A 75 375 10 HOH HOH . 
K 3 HOH A 76 376 13 HOH HOH . 
K 3 HOH A 77 377 68 HOH HOH . 
K 3 HOH A 78 378 69 HOH HOH . 
K 3 HOH A 79 379 79 HOH HOH . 
K 3 HOH A 80 380 117 HOH HOH . 
K 3 HOH A 81 381 26 HOH HOH . 
K 3 HOH A 82 382 5 HOH HOH . 
K 3 HOH A 83 383 56 HOH HOH . 
K 3 HOH A 84 384 11 HOH HOH . 
K 3 HOH A 85 385 37 HOH HOH . 
K 3 HOH A 86 386 25 HOH HOH . 
K 3 HOH A 87 387 97 HOH HOH . 
K 3 HOH A 88 388 36 HOH HOH . 
K 3 HOH A 89 389 54 HOH HOH . 
K 3 HOH A 90 390 43 HOH HOH . 
K 3 HOH A 91 391 115 HOH HOH . 
K 3 HOH A 92 392 109 HOH HOH . 
K 3 HOH A 93 393 33 HOH HOH . 
K 3 HOH A 94 394 77 HOH HOH . 
K 3 HOH A 95 395 118 HOH HOH . 
K 3 HOH A 96 396 74 HOH HOH . 
K 3 HOH A 97 397 90 HOH HOH . 
K 3 HOH A 98 398 73 HOH HOH . 
K 3 HOH A 99 399 18 HOH HOH . 
K 3 HOH A 100 400 63 HOH HOH . 
K 3 HOH A 101 401 19 HOH HOH . 
K 3 HOH A 102 402 28 HOH HOH . 
K 3 HOH A 103 403 49 HOH HOH . 
K 3 HOH A 104 404 65 HOH HOH . 
K 3 HOH A 105 405 103 HOH HOH . 
K 3 HOH A 106 406 100 HOH HOH . 
K 3 HOH A 107 407 61 HOH HOH . 
K 3 HOH A 108 408 93 HOH HOH . 
K 3 HOH A 109 409 112 HOH HOH . 
K 3 HOH A 110 410 42 HOH HOH . 
K 3 HOH A 111 411 66 HOH HOH . 
K 3 HOH A 112 412 78 HOH HOH . 
K 3 HOH A 113 413 96 HOH HOH . 
K 3 HOH A 114 414 121 HOH HOH . 
K 3 HOH A 115 415 6 HOH HOH . 
K 3 HOH A 116 416 91 HOH HOH . 
K 3 HOH A 117 417 102 HOH HOH . 
K 3 HOH A 118 418 125 HOH HOH . 
K 3 HOH A 119 419 95 HOH HOH . 
K 3 HOH A 120 420 85 HOH HOH . 
K 3 HOH A 121 421 116 HOH HOH . 
K 3 HOH A 122 422 87 HOH HOH . 
K 3 HOH A 123 423 94 HOH HOH . 
K 3 HOH A 124 424 67 HOH HOH . 
K 3 HOH A 125 425 119 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 SE SE SEY . . . C 2 15.419 27 19.515 0.56 28.15 ? SE SEY 202 A 1 
HETATM 2 C C SEY . . . C 2 15.952 26.935 17.708 0.56 19.13 ? C SEY 202 A 1 
HETATM 3 N N2 SEY . . . C 2 16.563 27.965 17.161 0.56 14.09 ? N2 SEY 202 A 1 
HETATM 4 N N1 SEY . . . C 2 15.7 25.863 16.987 0.56 21.33 ? N1 SEY 202 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#