data_5T4O
#
_model_server_result.job_id            afcNVBK763bbzzYBBZ4FEg 
_model_server_result.datetime_utc      '2025-07-05 13:13:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t4o 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"W","auth_seq_id":601}' 
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_entry.id    5T4O 
#
_exptl.entry_id    5T4O 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              507.181 
_entity.id                          9 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "ADENOSINE-5'-TRIPHOSPHATE" 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    22-meric 
_pdbx_struct_assembly.oligomeric_count      22 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 9 W N N 
? 9 X N N 
? 9 Y N N 
#
_chem_comp.formula           'C10 H16 N5 O13 P3' 
_chem_comp.formula_weight    507.181 
_chem_comp.id                ATP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "ADENOSINE-5'-TRIPHOSPHATE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G ATP doub 114 n n 
PG O2G ATP sing 115 n n 
PG O3G ATP sing 116 n n 
PG O3B ATP sing 117 n n 
O2G HOG2 ATP sing 118 n n 
O3G HOG3 ATP sing 119 n n 
PB O1B ATP doub 120 n n 
PB O2B ATP sing 121 n n 
PB O3B ATP sing 122 n n 
PB O3A ATP sing 123 n n 
O2B HOB2 ATP sing 124 n n 
PA O1A ATP doub 125 n n 
PA O2A ATP sing 126 n n 
PA O3A ATP sing 127 n n 
PA O5' ATP sing 128 n n 
O2A HOA2 ATP sing 129 n n 
O5' C5' ATP sing 130 n n 
C5' C4' ATP sing 131 n n 
C5' "H5'1" ATP sing 132 n n 
C5' "H5'2" ATP sing 133 n n 
C4' O4' ATP sing 134 n n 
C4' C3' ATP sing 135 n n 
C4' H4' ATP sing 136 n n 
O4' C1' ATP sing 137 n n 
C3' O3' ATP sing 138 n n 
C3' C2' ATP sing 139 n n 
C3' H3' ATP sing 140 n n 
O3' HO3' ATP sing 141 n n 
C2' O2' ATP sing 142 n n 
C2' C1' ATP sing 143 n n 
C2' H2' ATP sing 144 n n 
O2' HO2' ATP sing 145 n n 
C1' N9 ATP sing 146 n n 
C1' H1' ATP sing 147 n n 
N9 C8 ATP sing 148 n y 
N9 C4 ATP sing 149 n y 
C8 N7 ATP doub 150 n y 
C8 H8 ATP sing 151 n n 
N7 C5 ATP sing 152 n y 
C5 C6 ATP sing 153 n y 
C5 C4 ATP doub 154 n y 
C6 N6 ATP sing 155 n n 
C6 N1 ATP doub 156 n y 
N6 HN61 ATP sing 157 n n 
N6 HN62 ATP sing 158 n n 
N1 C2 ATP sing 159 n y 
C2 N3 ATP doub 160 n y 
C2 H2 ATP sing 161 n n 
N3 C4 ATP sing 162 n y 
#
_atom_sites.entry_id                     5T4O 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
W 9 ATP A 1 601 601 ATP ATP . 
X 9 ATP B 1 601 601 ATP ATP . 
Y 9 ATP C 1 601 601 ATP ATP . 
Z 10 ADP F 1 601 601 ADP ADP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG ATP . . . W 9 199.038 157.942 232.578 0.75 38.96 ? PG ATP 601 A 1 
HETATM 2 O O1G ATP . . . W 9 199.248 159.42 232.462 0.75 33.53 ? O1G ATP 601 A 1 
HETATM 3 O O2G ATP . . . W 9 197.609 157.503 232.467 0.75 29.6 ? O2G ATP 601 A 1 
HETATM 4 O O3G ATP . . . W 9 199.942 157.191 233.504 0.75 39.19 ? O3G ATP 601 A 1 
HETATM 5 P PB ATP . . . W 9 200.319 158.515 230.42 1 27.01 ? PB ATP 601 A 1 
HETATM 6 O O1B ATP . . . W 9 199.363 159.441 229.759 1 28.28 ? O1B ATP 601 A 1 
HETATM 7 O O2B ATP . . . W 9 201.362 158.922 231.38 1 27.49 ? O2B ATP 601 A 1 
HETATM 8 O O3B ATP . . . W 9 199.544 157.415 231.193 1 31.3 ? O3B ATP 601 A 1 
HETATM 9 P PA ATP . . . W 9 201.885 156.501 229.822 1 29.9 ? PA ATP 601 A 1 
HETATM 10 O O1A ATP . . . W 9 200.928 155.561 230.473 1 31.5 ? O1A ATP 601 A 1 
HETATM 11 O O2A ATP . . . W 9 202.92 157.181 230.654 1 31.81 ? O2A ATP 601 A 1 
HETATM 12 O O3A ATP . . . W 9 200.991 157.666 229.305 1 31.15 ? O3A ATP 601 A 1 
HETATM 13 O O5' ATP . . . W 9 202.36 155.978 228.379 1 28.91 ? O5' ATP 601 A 1 
HETATM 14 C C5' ATP . . . W 9 203.404 156.571 227.621 1 28.37 ? C5' ATP 601 A 1 
HETATM 15 C C4' ATP . . . W 9 204.178 155.468 226.913 1 29.92 ? C4' ATP 601 A 1 
HETATM 16 O O4' ATP . . . W 9 203.359 154.966 225.87 1 30.57 ? O4' ATP 601 A 1 
HETATM 17 C C3' ATP . . . W 9 205.497 155.9 226.29 1 31.26 ? C3' ATP 601 A 1 
HETATM 18 O O3' ATP . . . W 9 206.575 155.169 226.864 1 34.5 ? O3' ATP 601 A 1 
HETATM 19 C C2' ATP . . . W 9 205.461 155.424 224.873 1 33.15 ? C2' ATP 601 A 1 
HETATM 20 O O2' ATP . . . W 9 206.302 154.28 224.771 1 40.65 ? O2' ATP 601 A 1 
HETATM 21 C C1' ATP . . . W 9 204.073 154.91 224.646 1 28.72 ? C1' ATP 601 A 1 
HETATM 22 N N9 ATP . . . W 9 203.36 155.819 223.747 1 25.44 ? N9 ATP 601 A 1 
HETATM 23 C C8 ATP . . . W 9 202.099 156.214 223.961 1 26.21 ? C8 ATP 601 A 1 
HETATM 24 N N7 ATP . . . W 9 201.671 157.031 222.974 1 26.1 ? N7 ATP 601 A 1 
HETATM 25 C C5 ATP . . . W 9 202.682 157.163 222.104 1 28.29 ? C5 ATP 601 A 1 
HETATM 26 C C6 ATP . . . W 9 202.879 157.897 220.841 1 27 ? C6 ATP 601 A 1 
HETATM 27 N N6 ATP . . . W 9 201.9 158.664 220.295 1 27.82 ? N6 ATP 601 A 1 
HETATM 28 N N1 ATP . . . W 9 204.084 157.755 220.264 1 26.88 ? N1 ATP 601 A 1 
HETATM 29 C C2 ATP . . . W 9 205.075 157.01 220.783 1 25.47 ? C2 ATP 601 A 1 
HETATM 30 N N3 ATP . . . W 9 204.962 156.317 221.922 1 25.38 ? N3 ATP 601 A 1 
HETATM 31 C C4 ATP . . . W 9 203.802 156.356 222.616 1 23.19 ? C4 ATP 601 A 1 
#
_model_server_stats.io_time_ms              76 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           321 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#