data_5T6E # _model_server_result.job_id NKeE9sVgVqtlpIVw4FeH9w _model_server_result.datetime_utc '2024-12-02 07:20:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t6e # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 5T6E # _exptl.entry_id 5T6E _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.369 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-(4-{3,5-dichloro-4-[(2,4-dimethylpyridin-3-yl)methoxy]phenyl}pyridin-2-yl)piperazine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5T6E _cell.length_a 51.276 _cell.length_b 58.339 _cell.length_c 152.1 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T6E _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C23 H24 Cl2 N4 O' _chem_comp.formula_weight 443.369 _chem_comp.id 75R _chem_comp.mon_nstd_flag . _chem_comp.name 1-(4-{3,5-dichloro-4-[(2,4-dimethylpyridin-3-yl)methoxy]phenyl}pyridin-2-yl)piperazine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAS CAL 75R sing 1 n n NAS CAM 75R sing 2 n n CAL CAN 75R sing 3 n n CAN NBD 75R sing 4 n n CAM CAO 75R sing 5 n n CAO NBD 75R sing 6 n n NBD CBA 75R sing 7 n n NAR CBA 75R doub 8 n y NAR CAF 75R sing 9 n y CBA CAK 75R sing 10 n y CAF CAH 75R doub 11 n y CAK CAY 75R doub 12 n y CAH CAY 75R sing 13 n y CAY CAZ 75R sing 14 n n CAZ CAJ 75R doub 15 n y CAZ CAI 75R sing 16 n y CAJ CAW 75R sing 17 n y CAI CAV 75R doub 18 n y CAW CL1 75R sing 19 n n CAW CBC 75R doub 20 n y CAB CAX 75R sing 21 n n NAQ CAX 75R doub 22 n y NAQ CAE 75R sing 23 n y CAX CBB 75R sing 24 n y CAE CAG 75R doub 25 n y CAV CBC 75R sing 26 n y CAV CL2 75R sing 27 n n CBC OAT 75R sing 28 n n CAG CAU 75R sing 29 n y CBB CAU 75R doub 30 n y CBB CAP 75R sing 31 n n OAT CAP 75R sing 32 n n CAU CAA 75R sing 33 n n CAN H1 75R sing 34 n n CAN H2 75R sing 35 n n CAL H3 75R sing 36 n n CAL H4 75R sing 37 n n NAS H5 75R sing 38 n n CAM H7 75R sing 39 n n CAM H8 75R sing 40 n n CAO H9 75R sing 41 n n CAO H10 75R sing 42 n n CAK H11 75R sing 43 n n CAF H12 75R sing 44 n n CAH H13 75R sing 45 n n CAJ H14 75R sing 46 n n CAI H15 75R sing 47 n n CAP H16 75R sing 48 n n CAP H17 75R sing 49 n n CAA H18 75R sing 50 n n CAA H19 75R sing 51 n n CAA H20 75R sing 52 n n CAG H21 75R sing 53 n n CAE H22 75R sing 54 n n CAB H23 75R sing 55 n n CAB H24 75R sing 56 n n CAB H25 75R sing 57 n n # _atom_sites.entry_id 5T6E _atom_sites.fract_transf_matrix[1][1] 0.019502 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017141 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MYA A 1 501 1 MYA MYA . C 3 75R A 1 502 1 75R 2A3 . D 4 HOH A 1 601 58 HOH HOH . D 4 HOH A 2 602 111 HOH HOH . D 4 HOH A 3 603 67 HOH HOH . D 4 HOH A 4 604 94 HOH HOH . D 4 HOH A 5 605 199 HOH HOH . D 4 HOH A 6 606 155 HOH HOH . D 4 HOH A 7 607 188 HOH HOH . D 4 HOH A 8 608 41 HOH HOH . D 4 HOH A 9 609 150 HOH HOH . D 4 HOH A 10 610 77 HOH HOH . D 4 HOH A 11 611 134 HOH HOH . D 4 HOH A 12 612 62 HOH HOH . D 4 HOH A 13 613 95 HOH HOH . D 4 HOH A 14 614 143 HOH HOH . D 4 HOH A 15 615 36 HOH HOH . D 4 HOH A 16 616 72 HOH HOH . D 4 HOH A 17 617 11 HOH HOH . D 4 HOH A 18 618 83 HOH HOH . D 4 HOH A 19 619 106 HOH HOH . D 4 HOH A 20 620 132 HOH HOH . D 4 HOH A 21 621 156 HOH HOH . D 4 HOH A 22 622 38 HOH HOH . D 4 HOH A 23 623 79 HOH HOH . D 4 HOH A 24 624 153 HOH HOH . D 4 HOH A 25 625 99 HOH HOH . D 4 HOH A 26 626 90 HOH HOH . D 4 HOH A 27 627 171 HOH HOH . D 4 HOH A 28 628 45 HOH HOH . D 4 HOH A 29 629 46 HOH HOH . D 4 HOH A 30 630 57 HOH HOH . D 4 HOH A 31 631 167 HOH HOH . D 4 HOH A 32 632 185 HOH HOH . D 4 HOH A 33 633 60 HOH HOH . D 4 HOH A 34 634 39 HOH HOH . D 4 HOH A 35 635 24 HOH HOH . D 4 HOH A 36 636 200 HOH HOH . D 4 HOH A 37 637 138 HOH HOH . D 4 HOH A 38 638 198 HOH HOH . D 4 HOH A 39 639 19 HOH HOH . D 4 HOH A 40 640 201 HOH HOH . D 4 HOH A 41 641 137 HOH HOH . D 4 HOH A 42 642 55 HOH HOH . D 4 HOH A 43 643 152 HOH HOH . D 4 HOH A 44 644 32 HOH HOH . D 4 HOH A 45 645 43 HOH HOH . D 4 HOH A 46 646 17 HOH HOH . D 4 HOH A 47 647 44 HOH HOH . D 4 HOH A 48 648 148 HOH HOH . D 4 HOH A 49 649 104 HOH HOH . D 4 HOH A 50 650 127 HOH HOH . D 4 HOH A 51 651 204 HOH HOH . D 4 HOH A 52 652 69 HOH HOH . D 4 HOH A 53 653 196 HOH HOH . D 4 HOH A 54 654 63 HOH HOH . D 4 HOH A 55 655 61 HOH HOH . D 4 HOH A 56 656 34 HOH HOH . D 4 HOH A 57 657 108 HOH HOH . D 4 HOH A 58 658 37 HOH HOH . D 4 HOH A 59 659 26 HOH HOH . D 4 HOH A 60 660 170 HOH HOH . D 4 HOH A 61 661 66 HOH HOH . D 4 HOH A 62 662 1 HOH HOH . D 4 HOH A 63 663 9 HOH HOH . D 4 HOH A 64 664 16 HOH HOH . D 4 HOH A 65 665 176 HOH HOH . D 4 HOH A 66 666 100 HOH HOH . D 4 HOH A 67 667 81 HOH HOH . D 4 HOH A 68 668 14 HOH HOH . D 4 HOH A 69 669 49 HOH HOH . D 4 HOH A 70 670 68 HOH HOH . D 4 HOH A 71 671 120 HOH HOH . D 4 HOH A 72 672 189 HOH HOH . D 4 HOH A 73 673 113 HOH HOH . D 4 HOH A 74 674 42 HOH HOH . D 4 HOH A 75 675 140 HOH HOH . D 4 HOH A 76 676 78 HOH HOH . D 4 HOH A 77 677 73 HOH HOH . D 4 HOH A 78 678 93 HOH HOH . D 4 HOH A 79 679 114 HOH HOH . D 4 HOH A 80 680 175 HOH HOH . D 4 HOH A 81 681 193 HOH HOH . D 4 HOH A 82 682 35 HOH HOH . D 4 HOH A 83 683 203 HOH HOH . D 4 HOH A 84 684 50 HOH HOH . D 4 HOH A 85 685 25 HOH HOH . D 4 HOH A 86 686 21 HOH HOH . D 4 HOH A 87 687 158 HOH HOH . D 4 HOH A 88 688 28 HOH HOH . D 4 HOH A 89 689 47 HOH HOH . D 4 HOH A 90 690 124 HOH HOH . D 4 HOH A 91 691 56 HOH HOH . D 4 HOH A 92 692 119 HOH HOH . D 4 HOH A 93 693 87 HOH HOH . D 4 HOH A 94 694 3 HOH HOH . D 4 HOH A 95 695 186 HOH HOH . D 4 HOH A 96 696 6 HOH HOH . D 4 HOH A 97 697 181 HOH HOH . D 4 HOH A 98 698 22 HOH HOH . D 4 HOH A 99 699 92 HOH HOH . D 4 HOH A 100 700 53 HOH HOH . D 4 HOH A 101 701 4 HOH HOH . D 4 HOH A 102 702 180 HOH HOH . D 4 HOH A 103 703 129 HOH HOH . D 4 HOH A 104 704 112 HOH HOH . D 4 HOH A 105 705 12 HOH HOH . D 4 HOH A 106 706 118 HOH HOH . D 4 HOH A 107 707 144 HOH HOH . D 4 HOH A 108 708 76 HOH HOH . D 4 HOH A 109 709 96 HOH HOH . D 4 HOH A 110 710 202 HOH HOH . D 4 HOH A 111 711 184 HOH HOH . D 4 HOH A 112 712 182 HOH HOH . D 4 HOH A 113 713 168 HOH HOH . D 4 HOH A 114 714 130 HOH HOH . D 4 HOH A 115 715 23 HOH HOH . D 4 HOH A 116 716 54 HOH HOH . D 4 HOH A 117 717 51 HOH HOH . D 4 HOH A 118 718 160 HOH HOH . D 4 HOH A 119 719 183 HOH HOH . D 4 HOH A 120 720 30 HOH HOH . D 4 HOH A 121 721 71 HOH HOH . D 4 HOH A 122 722 15 HOH HOH . D 4 HOH A 123 723 5 HOH HOH . D 4 HOH A 124 724 98 HOH HOH . D 4 HOH A 125 725 173 HOH HOH . D 4 HOH A 126 726 136 HOH HOH . D 4 HOH A 127 727 33 HOH HOH . D 4 HOH A 128 728 48 HOH HOH . D 4 HOH A 129 729 194 HOH HOH . D 4 HOH A 130 730 2 HOH HOH . D 4 HOH A 131 731 115 HOH HOH . D 4 HOH A 132 732 97 HOH HOH . D 4 HOH A 133 733 105 HOH HOH . D 4 HOH A 134 734 197 HOH HOH . D 4 HOH A 135 735 149 HOH HOH . D 4 HOH A 136 736 101 HOH HOH . D 4 HOH A 137 737 31 HOH HOH . D 4 HOH A 138 738 13 HOH HOH . D 4 HOH A 139 739 84 HOH HOH . D 4 HOH A 140 740 20 HOH HOH . D 4 HOH A 141 741 64 HOH HOH . D 4 HOH A 142 742 88 HOH HOH . D 4 HOH A 143 743 122 HOH HOH . D 4 HOH A 144 744 103 HOH HOH . D 4 HOH A 145 745 10 HOH HOH . D 4 HOH A 146 746 128 HOH HOH . D 4 HOH A 147 747 80 HOH HOH . D 4 HOH A 148 748 164 HOH HOH . D 4 HOH A 149 749 117 HOH HOH . D 4 HOH A 150 750 147 HOH HOH . D 4 HOH A 151 751 174 HOH HOH . D 4 HOH A 152 752 18 HOH HOH . D 4 HOH A 153 753 40 HOH HOH . D 4 HOH A 154 754 165 HOH HOH . D 4 HOH A 155 755 166 HOH HOH . D 4 HOH A 156 756 27 HOH HOH . D 4 HOH A 157 757 205 HOH HOH . D 4 HOH A 158 758 163 HOH HOH . D 4 HOH A 159 759 8 HOH HOH . D 4 HOH A 160 760 169 HOH HOH . D 4 HOH A 161 761 151 HOH HOH . D 4 HOH A 162 762 70 HOH HOH . D 4 HOH A 163 763 157 HOH HOH . D 4 HOH A 164 764 121 HOH HOH . D 4 HOH A 165 765 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAN 75R . . . C 3 14.776 8.7 -19.19 1 44.69 ? CAN 75R 502 A 1 HETATM 2 C CAL 75R . . . C 3 14.969 7.339 -19.864 1 48.65 ? CAL 75R 502 A 1 HETATM 3 N NAS 75R . . . C 3 16.411 6.976 -19.993 1 47.06 ? NAS 75R 502 A 1 HETATM 4 C CAM 75R . . . C 3 17.067 6.925 -18.668 1 44.77 ? CAM 75R 502 A 1 HETATM 5 C CAO 75R . . . C 3 16.993 8.3 -18.016 1 47.84 ? CAO 75R 502 A 1 HETATM 6 N NBD 75R . . . C 3 15.552 8.656 -17.948 1 47.51 ? NBD 75R 502 A 1 HETATM 7 C CBA 75R . . . C 3 14.94 8.983 -16.766 1 48.6 ? CBA 75R 502 A 1 HETATM 8 C CAK 75R . . . C 3 15.611 8.987 -15.547 1 50.27 ? CAK 75R 502 A 1 HETATM 9 N NAR 75R . . . C 3 13.668 9.319 -16.853 1 51.32 ? NAR 75R 502 A 1 HETATM 10 C CAF 75R . . . C 3 13.004 9.654 -15.778 1 57.35 ? CAF 75R 502 A 1 HETATM 11 C CAH 75R . . . C 3 13.596 9.68 -14.528 1 55.29 ? CAH 75R 502 A 1 HETATM 12 C CAY 75R . . . C 3 14.931 9.338 -14.397 1 53.98 ? CAY 75R 502 A 1 HETATM 13 C CAZ 75R . . . C 3 15.536 9.393 -13.135 1 56.22 ? CAZ 75R 502 A 1 HETATM 14 C CAJ 75R . . . C 3 16.846 8.979 -12.901 1 52.91 ? CAJ 75R 502 A 1 HETATM 15 C CAW 75R . . . C 3 17.42 9.056 -11.624 1 55.2 ? CAW 75R 502 A 1 HETATM 16 CL CL1 75R . . . C 3 19.055 8.489 -11.439 1 55.91 ? CL1 75R 502 A 1 HETATM 17 C CAI 75R . . . C 3 14.823 9.931 -12.049 1 60.32 ? CAI 75R 502 A 1 HETATM 18 C CAV 75R . . . C 3 15.384 10.028 -10.772 1 61.03 ? CAV 75R 502 A 1 HETATM 19 CL CL2 75R . . . C 3 14.396 10.686 -9.512 1 59.11 ? CL2 75R 502 A 1 HETATM 20 C CBC 75R . . . C 3 16.692 9.584 -10.55 1 54.79 ? CBC 75R 502 A 1 HETATM 21 O OAT 75R . . . C 3 17.254 9.694 -9.316 1 60.76 ? OAT 75R 502 A 1 HETATM 22 C CAP 75R . . . C 3 17.741 11.137 -8.989 1 60.37 ? CAP 75R 502 A 1 HETATM 23 C CBB 75R . . . C 3 18.913 11.701 -9.598 1 68.8 ? CBB 75R 502 A 1 HETATM 24 C CAU 75R . . . C 3 20.193 11.457 -9.021 1 68.12 ? CAU 75R 502 A 1 HETATM 25 C CAA 75R . . . C 3 20.363 10.628 -7.728 1 72.28 ? CAA 75R 502 A 1 HETATM 26 C CAG 75R . . . C 3 21.354 11.955 -9.619 1 63.42 ? CAG 75R 502 A 1 HETATM 27 C CAE 75R . . . C 3 21.233 12.694 -10.789 1 61.52 ? CAE 75R 502 A 1 HETATM 28 N NAQ 75R . . . C 3 20.029 12.94 -11.347 1 66.33 ? NAQ 75R 502 A 1 HETATM 29 C CAX 75R . . . C 3 18.862 12.485 -10.797 1 67.87 ? CAX 75R 502 A 1 HETATM 30 C CAB 75R . . . C 3 17.543 12.829 -11.541 1 61.73 ? CAB 75R 502 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #