data_5T80
#
_model_server_result.job_id            ReF--YFzSJw9qnzM2LbgXQ 
_model_server_result.datetime_utc      '2024-10-18 06:18:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t80 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":301}' 
#
_entry.id    5T80 
#
_exptl.entry_id    5T80 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              368.36 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5T80 
_cell.length_a            55.221 
_cell.length_b            67.262 
_cell.length_c            196.843 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5T80 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 A SG CYS 158 H CYS 140 1_555 A SG CYS 214 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? 
disulf ? disulf3 B SG CYS 22 L CYS 23 1_555 B SG CYS 87 L CYS 88 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf4 B SG CYS 22 L CYS 23 1_555 B SG CYS 87 L CYS 88 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf5 B SG CYS 137 L CYS 135 1_555 B SG CYS 196 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
#
_chem_comp.formula           'C15 H29 O8 P' 
_chem_comp.formula_weight    368.36 
_chem_comp.id                44E 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O22 C21 44E doub 1 n n 
O12 P 44E doub 2 n n 
C1 C2 44E sing 3 n n 
C1 O11 44E sing 4 n n 
C2 C3 44E sing 5 n n 
C2 O21 44E sing 6 n n 
C23 C22 44E sing 7 n n 
C21 O21 44E sing 8 n n 
C21 C22 44E sing 9 n n 
C3 O31 44E sing 10 n n 
O11 P 44E sing 11 n n 
P O14 44E sing 12 n n 
P O13 44E sing 13 n n 
C32 C33 44E sing 14 n n 
C32 C31 44E sing 15 n n 
O31 C31 44E sing 16 n n 
C33 C34 44E sing 17 n n 
C31 O32 44E doub 18 n n 
C34 C35 44E sing 19 n n 
C36 C35 44E sing 20 n n 
O13 H1 44E sing 21 n n 
O14 H2 44E sing 22 n n 
C1 H3 44E sing 23 n n 
C1 H4 44E sing 24 n n 
C2 H5 44E sing 25 n n 
C22 H6 44E sing 26 n n 
C22 H7 44E sing 27 n n 
C23 H8 44E sing 28 n n 
C23 H9 44E sing 29 n n 
C3 H11 44E sing 30 n n 
C3 H12 44E sing 31 n n 
C32 H13 44E sing 32 n n 
C32 H14 44E sing 33 n n 
C33 H15 44E sing 34 n n 
C33 H16 44E sing 35 n n 
C34 H17 44E sing 36 n n 
C34 H18 44E sing 37 n n 
C35 H19 44E sing 38 n n 
C35 H20 44E sing 39 n n 
C36 H21 44E sing 40 n n 
C36 H22 44E sing 41 n n 
C36 H23 44E sing 42 n n 
C23 C4 44E sing 43 n n 
C4 C5 44E sing 44 n n 
C5 C6 44E sing 45 n n 
C4 H10 44E sing 46 n n 
C4 H24 44E sing 47 n n 
C5 H25 44E sing 48 n n 
C5 H26 44E sing 49 n n 
C6 H27 44E sing 50 n n 
C6 H28 44E sing 51 n n 
C6 H29 44E sing 52 n n 
#
_atom_sites.entry_id                     5T80 
_atom_sites.fract_transf_matrix[1][1]    0.018109 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014867 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00508 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 44E L 1 301 301 44E 44E . 
E 5 HOH H 1 301 301 HOH HOH . 
E 5 HOH H 2 302 302 HOH HOH . 
E 5 HOH H 3 303 303 HOH HOH . 
E 5 HOH H 4 304 304 HOH HOH . 
E 5 HOH H 5 305 305 HOH HOH . 
E 5 HOH H 6 306 306 HOH HOH . 
E 5 HOH H 7 307 307 HOH HOH . 
E 5 HOH H 8 308 308 HOH HOH . 
E 5 HOH H 9 309 309 HOH HOH . 
E 5 HOH H 10 310 310 HOH HOH . 
E 5 HOH H 11 311 311 HOH HOH . 
E 5 HOH H 12 312 312 HOH HOH . 
E 5 HOH H 13 313 313 HOH HOH . 
E 5 HOH H 14 314 314 HOH HOH . 
E 5 HOH H 15 315 315 HOH HOH . 
E 5 HOH H 16 316 316 HOH HOH . 
E 5 HOH H 17 317 317 HOH HOH . 
E 5 HOH H 18 318 318 HOH HOH . 
E 5 HOH H 19 319 319 HOH HOH . 
E 5 HOH H 20 320 320 HOH HOH . 
E 5 HOH H 21 321 321 HOH HOH . 
E 5 HOH H 22 322 322 HOH HOH . 
E 5 HOH H 23 323 323 HOH HOH . 
E 5 HOH H 24 324 324 HOH HOH . 
E 5 HOH H 25 325 325 HOH HOH . 
E 5 HOH H 26 326 326 HOH HOH . 
F 5 HOH L 1 401 401 HOH HOH . 
F 5 HOH L 2 402 402 HOH HOH . 
F 5 HOH L 3 403 403 HOH HOH . 
F 5 HOH L 4 404 404 HOH HOH . 
F 5 HOH L 5 405 405 HOH HOH . 
F 5 HOH L 6 406 406 HOH HOH . 
F 5 HOH L 7 407 407 HOH HOH . 
F 5 HOH L 8 408 408 HOH HOH . 
F 5 HOH L 9 409 409 HOH HOH . 
F 5 HOH L 10 410 410 HOH HOH . 
F 5 HOH L 11 411 411 HOH HOH . 
F 5 HOH L 12 412 412 HOH HOH . 
F 5 HOH L 13 413 413 HOH HOH . 
F 5 HOH L 14 414 414 HOH HOH . 
F 5 HOH L 15 415 415 HOH HOH . 
F 5 HOH L 16 416 416 HOH HOH . 
F 5 HOH L 17 417 417 HOH HOH . 
F 5 HOH L 18 418 418 HOH HOH . 
F 5 HOH L 19 419 419 HOH HOH . 
F 5 HOH L 20 420 420 HOH HOH . 
F 5 HOH L 21 421 421 HOH HOH . 
F 5 HOH L 22 422 422 HOH HOH . 
F 5 HOH L 23 423 423 HOH HOH . 
F 5 HOH L 24 424 424 HOH HOH . 
F 5 HOH L 25 425 425 HOH HOH . 
G 5 HOH G 1 201 201 HOH HOH . 
G 5 HOH G 2 202 202 HOH HOH . 
G 5 HOH G 3 203 203 HOH HOH . 
G 5 HOH G 4 204 204 HOH HOH . 
G 5 HOH G 5 205 205 HOH HOH . 
G 5 HOH G 6 206 206 HOH HOH . 
G 5 HOH G 7 207 207 HOH HOH . 
G 5 HOH G 8 208 208 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O13 44E . . . D 4 28.03 -8.43 3.371 1 174.78 ? O13 44E 301 L 1 
HETATM 2 P P 44E . . . D 4 27.785 -9.783 2.732 1 174.94 ? P 44E 301 L 1 
HETATM 3 O O14 44E . . . D 4 26.516 -10.393 3.288 1 174.17 -1 O14 44E 301 L 1 
HETATM 4 O O12 44E . . . D 4 28.908 -10.757 3.025 1 174.61 ? O12 44E 301 L 1 
HETATM 5 O O11 44E . . . D 4 27.65 -9.634 1.183 1 109.23 ? O11 44E 301 L 1 
HETATM 6 C C1 44E . . . D 4 28.692 -9.979 0.35 1 109.76 ? C1 44E 301 L 1 
HETATM 7 C C2 44E . . . D 4 29.053 -8.957 -0.676 1 111.87 ? C2 44E 301 L 1 
HETATM 8 O O21 44E . . . D 4 28.537 -7.735 -0.293 1 111.97 ? O21 44E 301 L 1 
HETATM 9 C C21 44E . . . D 4 29.167 -6.589 -0.704 1 111.05 ? C21 44E 301 L 1 
HETATM 10 O O22 44E . . . D 4 28.901 -6.087 -1.795 1 110.71 ? O22 44E 301 L 1 
HETATM 11 C C3 44E . . . D 4 28.466 -9.346 -1.997 1 112.91 ? C3 44E 301 L 1 
#
_model_server_stats.io_time_ms              0 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          16 
_model_server_stats.element_count           11 
#