data_5T85 # _model_server_result.job_id A1g4kkG5d6ehnlUSTKlxJQ _model_server_result.datetime_utc '2024-10-18 06:24:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5t85 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":302}' # _entry.id 5T85 # _exptl.entry_id 5T85 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5T85 _cell.length_a 55.006 _cell.length_b 67.287 _cell.length_c 194.678 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5T85 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 22 H CYS 22 1_555 A SG CYS 98 H CYS 92 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.032 ? disulf ? disulf3 A SG CYS 158 H CYS 140 1_555 A SG CYS 214 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf4 B SG CYS 22 L CYS 23 1_555 B SG CYS 87 L CYS 88 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.044 ? disulf ? disulf5 B SG CYS 22 L CYS 23 1_555 B SG CYS 87 L CYS 88 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.043 ? disulf ? disulf6 B SG CYS 137 L CYS 135 1_555 B SG CYS 196 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 300 n n C1 C2 PGE sing 301 n n C1 H1 PGE sing 302 n n C1 H12 PGE sing 303 n n O1 HO1 PGE sing 304 n n C2 O2 PGE sing 305 n n C2 H2 PGE sing 306 n n C2 H22 PGE sing 307 n n O2 C3 PGE sing 308 n n C3 C4 PGE sing 309 n n C3 H3 PGE sing 310 n n C3 H32 PGE sing 311 n n C4 O3 PGE sing 312 n n C4 H4 PGE sing 313 n n C4 H42 PGE sing 314 n n O4 C6 PGE sing 315 n n O4 HO4 PGE sing 316 n n C6 C5 PGE sing 317 n n C6 H6 PGE sing 318 n n C6 H62 PGE sing 319 n n C5 O3 PGE sing 320 n n C5 H5 PGE sing 321 n n C5 H52 PGE sing 322 n n # _atom_sites.entry_id 5T85 _atom_sites.fract_transf_matrix[1][1] 0.01818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014862 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 44G L 1 301 1 44G 44G . E 5 PGE L 1 302 230 PGE 15P . F 5 PGE G 1 201 229 PGE 15P . G 6 HOH H 1 301 123 HOH HOH . G 6 HOH H 2 302 18 HOH HOH . G 6 HOH H 3 303 130 HOH HOH . G 6 HOH H 4 304 25 HOH HOH . G 6 HOH H 5 305 56 HOH HOH . G 6 HOH H 6 306 41 HOH HOH . G 6 HOH H 7 307 104 HOH HOH . G 6 HOH H 8 308 59 HOH HOH . G 6 HOH H 9 309 96 HOH HOH . G 6 HOH H 10 310 64 HOH HOH . G 6 HOH H 11 311 39 HOH HOH . G 6 HOH H 12 312 67 HOH HOH . G 6 HOH H 13 313 127 HOH HOH . G 6 HOH H 14 314 103 HOH HOH . G 6 HOH H 15 315 132 HOH HOH . G 6 HOH H 16 316 2 HOH HOH . G 6 HOH H 17 317 4 HOH HOH . G 6 HOH H 18 318 50 HOH HOH . G 6 HOH H 19 319 19 HOH HOH . G 6 HOH H 20 320 105 HOH HOH . G 6 HOH H 21 321 144 HOH HOH . G 6 HOH H 22 322 14 HOH HOH . G 6 HOH H 23 323 61 HOH HOH . G 6 HOH H 24 324 5 HOH HOH . G 6 HOH H 25 325 28 HOH HOH . G 6 HOH H 26 326 128 HOH HOH . G 6 HOH H 27 327 97 HOH HOH . G 6 HOH H 28 328 8 HOH HOH . G 6 HOH H 29 329 58 HOH HOH . G 6 HOH H 30 330 121 HOH HOH . G 6 HOH H 31 331 133 HOH HOH . G 6 HOH H 32 332 47 HOH HOH . G 6 HOH H 33 333 98 HOH HOH . G 6 HOH H 34 334 134 HOH HOH . G 6 HOH H 35 335 90 HOH HOH . G 6 HOH H 36 336 122 HOH HOH . G 6 HOH H 37 337 102 HOH HOH . G 6 HOH H 38 338 62 HOH HOH . G 6 HOH H 39 339 36 HOH HOH . G 6 HOH H 40 340 33 HOH HOH . G 6 HOH H 41 341 63 HOH HOH . G 6 HOH H 42 342 65 HOH HOH . G 6 HOH H 43 343 32 HOH HOH . G 6 HOH H 44 344 94 HOH HOH . G 6 HOH H 45 345 101 HOH HOH . G 6 HOH H 46 346 92 HOH HOH . G 6 HOH H 47 347 31 HOH HOH . G 6 HOH H 48 348 93 HOH HOH . G 6 HOH H 49 349 16 HOH HOH . G 6 HOH H 50 350 91 HOH HOH . G 6 HOH H 51 351 154 HOH HOH . H 6 HOH L 1 401 22 HOH HOH . H 6 HOH L 2 402 109 HOH HOH . H 6 HOH L 3 403 118 HOH HOH . H 6 HOH L 4 404 13 HOH HOH . H 6 HOH L 5 405 21 HOH HOH . H 6 HOH L 6 406 29 HOH HOH . H 6 HOH L 7 407 110 HOH HOH . H 6 HOH L 8 408 81 HOH HOH . H 6 HOH L 9 409 40 HOH HOH . H 6 HOH L 10 410 26 HOH HOH . H 6 HOH L 11 411 141 HOH HOH . H 6 HOH L 12 412 114 HOH HOH . H 6 HOH L 13 413 78 HOH HOH . H 6 HOH L 14 414 115 HOH HOH . H 6 HOH L 15 415 83 HOH HOH . H 6 HOH L 16 416 139 HOH HOH . H 6 HOH L 17 417 138 HOH HOH . H 6 HOH L 18 418 72 HOH HOH . H 6 HOH L 19 419 12 HOH HOH . H 6 HOH L 20 420 143 HOH HOH . H 6 HOH L 21 421 60 HOH HOH . H 6 HOH L 22 422 9 HOH HOH . H 6 HOH L 23 423 17 HOH HOH . H 6 HOH L 24 424 57 HOH HOH . H 6 HOH L 25 425 136 HOH HOH . H 6 HOH L 26 426 135 HOH HOH . H 6 HOH L 27 427 20 HOH HOH . H 6 HOH L 28 428 3 HOH HOH . H 6 HOH L 29 429 34 HOH HOH . H 6 HOH L 30 430 113 HOH HOH . H 6 HOH L 31 431 49 HOH HOH . H 6 HOH L 32 432 54 HOH HOH . H 6 HOH L 33 433 1 HOH HOH . H 6 HOH L 34 434 75 HOH HOH . H 6 HOH L 35 435 79 HOH HOH . H 6 HOH L 36 436 53 HOH HOH . H 6 HOH L 37 437 52 HOH HOH . H 6 HOH L 38 438 46 HOH HOH . H 6 HOH L 39 439 140 HOH HOH . H 6 HOH L 40 440 155 HOH HOH . H 6 HOH L 41 441 145 HOH HOH . H 6 HOH L 42 442 137 HOH HOH . H 6 HOH L 43 443 11 HOH HOH . H 6 HOH L 44 444 116 HOH HOH . H 6 HOH L 45 445 10 HOH HOH . H 6 HOH L 46 446 37 HOH HOH . H 6 HOH L 47 447 142 HOH HOH . H 6 HOH L 48 448 129 HOH HOH . H 6 HOH L 49 449 76 HOH HOH . H 6 HOH L 50 450 131 HOH HOH . H 6 HOH L 51 451 66 HOH HOH . H 6 HOH L 52 452 73 HOH HOH . H 6 HOH L 53 453 106 HOH HOH . H 6 HOH L 54 454 126 HOH HOH . H 6 HOH L 55 455 69 HOH HOH . H 6 HOH L 56 456 43 HOH HOH . H 6 HOH L 57 457 70 HOH HOH . H 6 HOH L 58 458 71 HOH HOH . H 6 HOH L 59 459 77 HOH HOH . H 6 HOH L 60 460 100 HOH HOH . H 6 HOH L 61 461 84 HOH HOH . H 6 HOH L 62 462 68 HOH HOH . I 6 HOH G 1 301 35 HOH HOH . I 6 HOH G 2 302 42 HOH HOH . I 6 HOH G 3 303 120 HOH HOH . I 6 HOH G 4 304 99 HOH HOH . I 6 HOH G 5 305 27 HOH HOH . I 6 HOH G 6 306 149 HOH HOH . I 6 HOH G 7 307 108 HOH HOH . I 6 HOH G 8 308 24 HOH HOH . I 6 HOH G 9 309 146 HOH HOH . I 6 HOH G 10 310 88 HOH HOH . I 6 HOH G 11 311 6 HOH HOH . I 6 HOH G 12 312 148 HOH HOH . I 6 HOH G 13 313 87 HOH HOH . I 6 HOH G 14 314 15 HOH HOH . I 6 HOH G 15 315 7 HOH HOH . I 6 HOH G 16 316 51 HOH HOH . I 6 HOH G 17 317 86 HOH HOH . I 6 HOH G 18 318 119 HOH HOH . I 6 HOH G 19 319 107 HOH HOH . I 6 HOH G 20 320 95 HOH HOH . I 6 HOH G 21 321 89 HOH HOH . I 6 HOH G 22 322 125 HOH HOH . I 6 HOH G 23 323 147 HOH HOH . I 6 HOH G 24 324 150 HOH HOH . I 6 HOH G 25 325 112 HOH HOH . I 6 HOH G 26 326 151 HOH HOH . I 6 HOH G 27 327 74 HOH HOH . I 6 HOH G 28 328 156 HOH HOH . I 6 HOH G 29 329 152 HOH HOH . I 6 HOH G 30 330 85 HOH HOH . I 6 HOH G 31 331 23 HOH HOH . I 6 HOH G 32 332 157 HOH HOH . I 6 HOH G 33 333 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 PGE . . . E 5 0.101 11.906 29.471 1 75.04 ? C3 PGE 302 L 1 HETATM 2 C C4 PGE . . . E 5 1.472 12.225 28.966 1 75.13 ? C4 PGE 302 L 1 HETATM 3 O O4 PGE . . . E 5 4.361 15.296 28.238 1 74.42 ? O4 PGE 302 L 1 HETATM 4 C C6 PGE . . . E 5 3.05 14.832 28.212 1 74.63 ? C6 PGE 302 L 1 HETATM 5 C C5 PGE . . . E 5 2.737 13.582 27.441 1 74.92 ? C5 PGE 302 L 1 HETATM 6 O O3 PGE . . . E 5 1.588 12.87 27.743 1 75.12 ? O3 PGE 302 L 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #