data_5T8R
#
_model_server_result.job_id            tgw2dmDq0pfG9mpACWiwkQ 
_model_server_result.datetime_utc      '2025-07-31 06:18:19' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5t8r 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":1801}' 
#
_entry.id    5T8R 
#
_exptl.entry_id    5T8R 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5T8R 
_cell.length_a            72.607 
_cell.length_b            72.607 
_cell.length_c            99.431 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5T8R 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? dimeric 2 author_defined_assembly 4 
PISA trimeric 3 software_defined_assembly 5 
PISA trimeric 3 software_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,F,G,H,I,R,W 1 1 
B,J,K,L,S 2 1 
C,M,N,O,T 3 1 
D,E,P,Q,U,V 4 1 
A,C,F,G,H,I,M,N,O,R,T,W 5 1 
B,D,E,J,K,L,P,Q,S,U,V 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
? 3 J N N 
? 3 K N N 
? 3 M N N 
? 3 N N N 
? 3 P N N 
? 3 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 9 A CYS 1679 1_555 G ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc2 A SG CYS 12 A CYS 1682 1_555 G ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc3 A SG CYS 24 A CYS 1694 1_555 H ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? 
metalc ? metalc4 A SG CYS 27 A CYS 1697 1_555 H ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? 
metalc ? metalc5 A ND1 HIS 32 A HIS 1702 1_555 G ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.075 ? 
metalc ? metalc6 A SG CYS 35 A CYS 1705 1_555 G ZN ZN . A ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? 
metalc ? metalc7 A SG CYS 50 A CYS 1720 1_555 H ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.339 ? 
metalc ? metalc8 A SG CYS 53 A CYS 1723 1_555 H ZN ZN . A ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc9 B SG CYS 9 B CYS 1679 1_555 J ZN ZN . B ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc10 B SG CYS 12 B CYS 1682 1_555 J ZN ZN . B ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc11 B SG CYS 24 B CYS 1694 1_555 K ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? 
metalc ? metalc12 B SG CYS 27 B CYS 1697 1_555 K ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc13 B ND1 HIS 32 B HIS 1702 1_555 J ZN ZN . B ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? 
metalc ? metalc14 B SG CYS 35 B CYS 1705 1_555 J ZN ZN . B ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc15 B SG CYS 50 B CYS 1720 1_555 K ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? 
metalc ? metalc16 B SG CYS 53 B CYS 1723 1_555 K ZN ZN . B ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc17 C SG CYS 9 C CYS 1679 1_555 M ZN ZN . C ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? 
metalc ? metalc18 C SG CYS 12 C CYS 1682 1_555 M ZN ZN . C ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? 
metalc ? metalc19 C SG CYS 24 C CYS 1694 1_555 N ZN ZN . C ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc20 C SG CYS 27 C CYS 1697 1_555 N ZN ZN . C ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? 
metalc ? metalc21 C ND1 HIS 32 C HIS 1702 1_555 M ZN ZN . C ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc22 C SG CYS 35 C CYS 1705 1_555 M ZN ZN . C ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc23 C SG CYS 50 C CYS 1720 1_555 N ZN ZN . C ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? 
metalc ? metalc24 C SG CYS 53 C CYS 1723 1_555 N ZN ZN . C ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? 
metalc ? metalc25 D SG CYS 9 D CYS 1679 1_555 P ZN ZN . D ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
metalc ? metalc26 D SG CYS 12 D CYS 1682 1_555 P ZN ZN . D ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc27 D SG CYS 24 D CYS 1694 1_555 Q ZN ZN . D ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? 
metalc ? metalc28 D SG CYS 27 D CYS 1697 1_555 Q ZN ZN . D ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc29 D ND1 HIS 32 D HIS 1702 1_555 P ZN ZN . D ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? 
metalc ? metalc30 D SG CYS 35 D CYS 1705 1_555 P ZN ZN . D ZN 1801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc31 D SG CYS 50 D CYS 1720 1_555 Q ZN ZN . D ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? 
metalc ? metalc32 D SG CYS 53 D CYS 1723 1_555 Q ZN ZN . D ZN 1802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5T8R 
_atom_sites.fract_transf_matrix[1][1]    0.013773 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013773 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010057 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 ZN A 1 1801 1801 ZN ZN . 
H 3 ZN A 1 1802 1802 ZN ZN . 
I 4 PO4 A 1 1803 1803 PO4 PO4 . 
J 3 ZN B 1 1801 1801 ZN ZN . 
K 3 ZN B 1 1802 1802 ZN ZN . 
L 4 PO4 B 1 1803 1803 PO4 PO4 . 
M 3 ZN C 1 1801 1801 ZN ZN . 
N 3 ZN C 1 1802 1802 ZN ZN . 
O 5 GOL C 1 1803 1803 GOL GOL . 
P 3 ZN D 1 1801 1801 ZN ZN . 
Q 3 ZN D 1 1802 1802 ZN ZN . 
R 6 HOH A 1 1901 100 HOH HOH . 
R 6 HOH A 2 1902 62 HOH HOH . 
R 6 HOH A 3 1903 12 HOH HOH . 
R 6 HOH A 4 1904 63 HOH HOH . 
R 6 HOH A 5 1905 11 HOH HOH . 
R 6 HOH A 6 1906 86 HOH HOH . 
R 6 HOH A 7 1907 84 HOH HOH . 
R 6 HOH A 8 1908 5 HOH HOH . 
R 6 HOH A 9 1909 67 HOH HOH . 
R 6 HOH A 10 1910 70 HOH HOH . 
R 6 HOH A 11 1911 29 HOH HOH . 
R 6 HOH A 12 1912 64 HOH HOH . 
R 6 HOH A 13 1913 1914 HOH HOH . 
R 6 HOH A 14 1914 101 HOH HOH . 
R 6 HOH A 15 1915 1909 HOH HOH . 
R 6 HOH A 16 1916 77 HOH HOH . 
R 6 HOH A 17 1917 58 HOH HOH . 
R 6 HOH A 18 1918 1908 HOH HOH . 
R 6 HOH A 19 1919 1923 HOH HOH . 
R 6 HOH A 20 1920 1907 HOH HOH . 
R 6 HOH A 21 1921 1918 HOH HOH . 
R 6 HOH A 22 1922 89 HOH HOH . 
R 6 HOH A 23 1923 102 HOH HOH . 
R 6 HOH A 24 1924 1912 HOH HOH . 
R 6 HOH A 25 1925 4 HOH HOH . 
S 6 HOH B 1 1901 1901 HOH HOH . 
S 6 HOH B 2 1902 1903 HOH HOH . 
S 6 HOH B 3 1903 90 HOH HOH . 
S 6 HOH B 4 1904 1921 HOH HOH . 
S 6 HOH B 5 1905 1912 HOH HOH . 
S 6 HOH B 6 1906 23 HOH HOH . 
S 6 HOH B 7 1907 98 HOH HOH . 
S 6 HOH B 8 1908 1918 HOH HOH . 
S 6 HOH B 9 1909 1904 HOH HOH . 
S 6 HOH B 10 1910 53 HOH HOH . 
S 6 HOH B 11 1911 3 HOH HOH . 
S 6 HOH B 12 1912 1924 HOH HOH . 
S 6 HOH B 13 1913 1 HOH HOH . 
S 6 HOH B 14 1914 1902 HOH HOH . 
S 6 HOH B 15 1915 2 HOH HOH . 
S 6 HOH B 16 1916 1917 HOH HOH . 
S 6 HOH B 17 1917 57 HOH HOH . 
S 6 HOH B 18 1918 1906 HOH HOH . 
S 6 HOH B 19 1919 96 HOH HOH . 
S 6 HOH B 20 1920 69 HOH HOH . 
S 6 HOH B 21 1921 91 HOH HOH . 
T 6 HOH C 1 1901 82 HOH HOH . 
T 6 HOH C 2 1902 81 HOH HOH . 
T 6 HOH C 3 1903 75 HOH HOH . 
T 6 HOH C 4 1904 1926 HOH HOH . 
T 6 HOH C 5 1905 1923 HOH HOH . 
T 6 HOH C 6 1906 1932 HOH HOH . 
T 6 HOH C 7 1907 1901 HOH HOH . 
T 6 HOH C 8 1908 76 HOH HOH . 
T 6 HOH C 9 1909 1902 HOH HOH . 
T 6 HOH C 10 1910 1916 HOH HOH . 
T 6 HOH C 11 1911 1921 HOH HOH . 
T 6 HOH C 12 1912 1905 HOH HOH . 
T 6 HOH C 13 1913 1913 HOH HOH . 
T 6 HOH C 14 1914 1906 HOH HOH . 
T 6 HOH C 15 1915 1925 HOH HOH . 
T 6 HOH C 16 1916 85 HOH HOH . 
T 6 HOH C 17 1917 46 HOH HOH . 
T 6 HOH C 18 1918 99 HOH HOH . 
T 6 HOH C 19 1919 7 HOH HOH . 
T 6 HOH C 20 1920 94 HOH HOH . 
T 6 HOH C 21 1921 1920 HOH HOH . 
T 6 HOH C 22 1922 1934 HOH HOH . 
T 6 HOH C 23 1923 1904 HOH HOH . 
T 6 HOH C 24 1924 68 HOH HOH . 
U 6 HOH D 1 1901 1908 HOH HOH . 
U 6 HOH D 2 1902 1912 HOH HOH . 
U 6 HOH D 3 1903 1911 HOH HOH . 
U 6 HOH D 4 1904 1906 HOH HOH . 
U 6 HOH D 5 1905 66 HOH HOH . 
U 6 HOH D 6 1906 1903 HOH HOH . 
U 6 HOH D 7 1907 1901 HOH HOH . 
U 6 HOH D 8 1908 1904 HOH HOH . 
U 6 HOH D 9 1909 14 HOH HOH . 
U 6 HOH D 10 1910 8 HOH HOH . 
U 6 HOH D 11 1911 1905 HOH HOH . 
U 6 HOH D 12 1912 1903 HOH HOH . 
U 6 HOH D 13 1913 83 HOH HOH . 
U 6 HOH D 14 1914 80 HOH HOH . 
U 6 HOH D 15 1915 92 HOH HOH . 
U 6 HOH D 16 1916 95 HOH HOH . 
U 6 HOH D 17 1917 1909 HOH HOH . 
U 6 HOH D 18 1918 1910 HOH HOH . 
U 6 HOH D 19 1919 1902 HOH HOH . 
U 6 HOH D 20 1920 93 HOH HOH . 
U 6 HOH D 21 1921 1932 HOH HOH . 
U 6 HOH D 22 1922 97 HOH HOH . 
U 6 HOH D 23 1923 1926 HOH HOH . 
U 6 HOH D 24 1924 78 HOH HOH . 
V 6 HOH E 1 101 74 HOH HOH . 
W 6 HOH G 1 201 79 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         G 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               5.151 
_atom_site.Cartn_y               32.616 
_atom_site.Cartn_z               17.281 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        35.28 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1801 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           311 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           1 
#