data_5TB1 # _model_server_result.job_id 4JwmEnNwSnyBXMXtxeUSWQ _model_server_result.datetime_utc '2024-11-26 17:51:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":6000}' # _entry.id 5TB1 # _exptl.entry_id 5TB1 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TB1 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 4337 B CYS 4958 1_555 E SG CYS 4340 B CYS 4961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? disulf ? disulf2 F SG CYS 4337 I CYS 4958 1_555 F SG CYS 4340 I CYS 4961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? disulf ? disulf3 G SG CYS 4337 E CYS 4958 1_555 G SG CYS 4340 E CYS 4961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? disulf ? disulf4 H SG CYS 4337 G CYS 4958 1_555 H SG CYS 4340 G CYS 4961 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.617 ? metalc ? metalc1 E SG CYS 4337 B CYS 4958 1_555 I ZN ZN . B ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc2 E SG CYS 4340 B CYS 4961 1_555 I ZN ZN . B ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc3 E NE2 HIS 4357 B HIS 4978 1_555 I ZN ZN . B ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc4 E ND1 HIS 4362 B HIS 4983 1_555 I ZN ZN . B ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc5 F SG CYS 4337 I CYS 4958 1_555 J ZN ZN . I ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc6 F SG CYS 4340 I CYS 4961 1_555 J ZN ZN . I ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc7 F NE2 HIS 4357 I HIS 4978 1_555 J ZN ZN . I ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc8 F ND1 HIS 4362 I HIS 4983 1_555 J ZN ZN . I ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc9 G SG CYS 4337 E CYS 4958 1_555 K ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc10 G SG CYS 4340 E CYS 4961 1_555 K ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc11 G NE2 HIS 4357 E HIS 4978 1_555 K ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc12 G ND1 HIS 4362 E HIS 4983 1_555 K ZN ZN . E ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc13 H SG CYS 4337 G CYS 4958 1_555 L ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.728 ? metalc ? metalc14 H SG CYS 4340 G CYS 4961 1_555 L ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? metalc ? metalc15 H NE2 HIS 4357 G HIS 4978 1_555 L ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? metalc ? metalc16 H ND1 HIS 4362 G HIS 4983 1_555 L ZN ZN . G ZN 6000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TB1 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 3 ZN B 1 6000 6000 ZN ZN . J 3 ZN I 1 6000 6000 ZN ZN . K 3 ZN E 1 6000 6000 ZN ZN . L 3 ZN G 1 6000 6000 ZN ZN . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x 266.618 _atom_site.Cartn_y 238.77 _atom_site.Cartn_z 232.8 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 183.13 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 6000 _atom_site.auth_asym_id G _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 115 _model_server_stats.query_time_ms 257 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #