data_5TBP
#
_model_server_result.job_id            B0Koln4dycZ1rFnUvGzZ8w 
_model_server_result.datetime_utc      '2025-01-10 09:11:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tbp 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":506}' 
#
_entry.id    5TBP 
#
_exptl.entry_id    5TBP 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.15 
_cell.angle_gamma         90 
_cell.entry_id            5TBP 
_cell.length_a            46.64 
_cell.length_b            99.38 
_cell.length_c            109.86 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TBP 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X 1 1 
A,C,E,F,G,H,I,J,K,L,Q,U,W 2 1 
B,D,M,N,O,P,R,S,T,V,X 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 51 A CYS 269 1_555 C SG CYS 51 C CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 51 B CYS 269 1_555 D SG CYS 51 D CYS 269 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 137 n n 
S C1 DMS sing 138 n n 
S C2 DMS sing 139 n n 
C1 H11 DMS sing 140 n n 
C1 H12 DMS sing 141 n n 
C1 H13 DMS sing 142 n n 
C2 H21 DMS sing 143 n n 
C2 H22 DMS sing 144 n n 
C2 H23 DMS sing 145 n n 
#
_atom_sites.entry_id                     5TBP 
_atom_sites.fract_transf_matrix[1][1]    0.021441 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.003453 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010062 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00922 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 7A4 A 1 501 501 7A4 7A4 . 
F 2 7A4 A 1 502 502 7A4 7A4 . 
G 2 7A4 A 1 503 503 7A4 7A4 . 
H 3 ACT A 1 504 504 ACT ACT . 
I 3 ACT A 1 505 505 ACT ACT . 
J 4 DMS A 1 506 506 DMS DMS . 
K 3 ACT A 1 507 507 ACT ACT . 
L 3 ACT A 1 508 508 ACT ACT . 
M 2 7A4 B 1 501 501 7A4 7A4 . 
N 5 GOL B 1 502 502 GOL GOL . 
O 3 ACT B 1 503 503 ACT ACT . 
P 3 ACT B 1 504 504 ACT ACT . 
Q 5 GOL C 1 501 501 GOL GOL . 
R 2 7A4 D 1 501 501 7A4 7A4 . 
S 2 7A4 D 1 502 502 7A4 7A4 . 
T 3 ACT D 1 503 503 ACT ACT . 
U 6 HOH A 1 601 601 HOH HOH . 
U 6 HOH A 2 602 602 HOH HOH . 
U 6 HOH A 3 603 603 HOH HOH . 
U 6 HOH A 4 604 604 HOH HOH . 
U 6 HOH A 5 605 605 HOH HOH . 
U 6 HOH A 6 606 606 HOH HOH . 
U 6 HOH A 7 607 607 HOH HOH . 
U 6 HOH A 8 608 608 HOH HOH . 
U 6 HOH A 9 609 609 HOH HOH . 
U 6 HOH A 10 610 610 HOH HOH . 
U 6 HOH A 11 611 611 HOH HOH . 
U 6 HOH A 12 612 612 HOH HOH . 
U 6 HOH A 13 613 613 HOH HOH . 
U 6 HOH A 14 614 614 HOH HOH . 
U 6 HOH A 15 615 615 HOH HOH . 
U 6 HOH A 16 616 616 HOH HOH . 
U 6 HOH A 17 617 617 HOH HOH . 
U 6 HOH A 18 618 618 HOH HOH . 
U 6 HOH A 19 619 619 HOH HOH . 
U 6 HOH A 20 620 620 HOH HOH . 
U 6 HOH A 21 621 621 HOH HOH . 
U 6 HOH A 22 622 622 HOH HOH . 
U 6 HOH A 23 623 623 HOH HOH . 
U 6 HOH A 24 624 624 HOH HOH . 
U 6 HOH A 25 625 625 HOH HOH . 
U 6 HOH A 26 626 626 HOH HOH . 
U 6 HOH A 27 627 627 HOH HOH . 
U 6 HOH A 28 628 628 HOH HOH . 
U 6 HOH A 29 629 629 HOH HOH . 
U 6 HOH A 30 630 630 HOH HOH . 
U 6 HOH A 31 631 631 HOH HOH . 
U 6 HOH A 32 632 632 HOH HOH . 
U 6 HOH A 33 633 633 HOH HOH . 
U 6 HOH A 34 634 634 HOH HOH . 
U 6 HOH A 35 635 635 HOH HOH . 
U 6 HOH A 36 636 636 HOH HOH . 
U 6 HOH A 37 637 637 HOH HOH . 
U 6 HOH A 38 638 638 HOH HOH . 
U 6 HOH A 39 639 639 HOH HOH . 
U 6 HOH A 40 640 640 HOH HOH . 
U 6 HOH A 41 641 641 HOH HOH . 
U 6 HOH A 42 642 642 HOH HOH . 
U 6 HOH A 43 643 643 HOH HOH . 
U 6 HOH A 44 644 644 HOH HOH . 
U 6 HOH A 45 645 645 HOH HOH . 
U 6 HOH A 46 646 646 HOH HOH . 
U 6 HOH A 47 647 647 HOH HOH . 
U 6 HOH A 48 648 648 HOH HOH . 
U 6 HOH A 49 649 649 HOH HOH . 
U 6 HOH A 50 650 650 HOH HOH . 
V 6 HOH B 1 601 601 HOH HOH . 
V 6 HOH B 2 602 602 HOH HOH . 
V 6 HOH B 3 603 603 HOH HOH . 
V 6 HOH B 4 604 604 HOH HOH . 
V 6 HOH B 5 605 605 HOH HOH . 
V 6 HOH B 6 606 606 HOH HOH . 
V 6 HOH B 7 607 607 HOH HOH . 
V 6 HOH B 8 608 608 HOH HOH . 
V 6 HOH B 9 609 609 HOH HOH . 
V 6 HOH B 10 610 610 HOH HOH . 
V 6 HOH B 11 611 611 HOH HOH . 
V 6 HOH B 12 612 612 HOH HOH . 
V 6 HOH B 13 613 613 HOH HOH . 
V 6 HOH B 14 614 614 HOH HOH . 
V 6 HOH B 15 615 615 HOH HOH . 
V 6 HOH B 16 616 616 HOH HOH . 
V 6 HOH B 17 617 617 HOH HOH . 
V 6 HOH B 18 618 618 HOH HOH . 
V 6 HOH B 19 619 619 HOH HOH . 
V 6 HOH B 20 620 620 HOH HOH . 
V 6 HOH B 21 621 621 HOH HOH . 
V 6 HOH B 22 622 622 HOH HOH . 
V 6 HOH B 23 623 623 HOH HOH . 
V 6 HOH B 24 624 624 HOH HOH . 
V 6 HOH B 25 625 625 HOH HOH . 
V 6 HOH B 26 626 626 HOH HOH . 
V 6 HOH B 27 627 627 HOH HOH . 
V 6 HOH B 28 628 628 HOH HOH . 
V 6 HOH B 29 629 629 HOH HOH . 
V 6 HOH B 30 630 630 HOH HOH . 
V 6 HOH B 31 631 631 HOH HOH . 
V 6 HOH B 32 632 632 HOH HOH . 
V 6 HOH B 33 633 633 HOH HOH . 
V 6 HOH B 34 634 634 HOH HOH . 
V 6 HOH B 35 635 635 HOH HOH . 
V 6 HOH B 36 636 636 HOH HOH . 
V 6 HOH B 37 637 637 HOH HOH . 
V 6 HOH B 38 638 638 HOH HOH . 
V 6 HOH B 39 639 639 HOH HOH . 
W 6 HOH C 1 601 601 HOH HOH . 
W 6 HOH C 2 602 602 HOH HOH . 
W 6 HOH C 3 603 603 HOH HOH . 
W 6 HOH C 4 604 604 HOH HOH . 
W 6 HOH C 5 605 605 HOH HOH . 
W 6 HOH C 6 606 606 HOH HOH . 
W 6 HOH C 7 607 607 HOH HOH . 
W 6 HOH C 8 608 608 HOH HOH . 
W 6 HOH C 9 609 609 HOH HOH . 
W 6 HOH C 10 610 610 HOH HOH . 
W 6 HOH C 11 611 611 HOH HOH . 
W 6 HOH C 12 612 612 HOH HOH . 
W 6 HOH C 13 613 613 HOH HOH . 
W 6 HOH C 14 614 614 HOH HOH . 
W 6 HOH C 15 615 615 HOH HOH . 
W 6 HOH C 16 616 616 HOH HOH . 
W 6 HOH C 17 617 617 HOH HOH . 
W 6 HOH C 18 618 618 HOH HOH . 
W 6 HOH C 19 619 619 HOH HOH . 
W 6 HOH C 20 620 620 HOH HOH . 
W 6 HOH C 21 621 621 HOH HOH . 
X 6 HOH D 1 601 601 HOH HOH . 
X 6 HOH D 2 602 602 HOH HOH . 
X 6 HOH D 3 603 603 HOH HOH . 
X 6 HOH D 4 604 604 HOH HOH . 
X 6 HOH D 5 605 605 HOH HOH . 
X 6 HOH D 6 606 606 HOH HOH . 
X 6 HOH D 7 607 607 HOH HOH . 
X 6 HOH D 8 608 608 HOH HOH . 
X 6 HOH D 9 609 609 HOH HOH . 
X 6 HOH D 10 610 610 HOH HOH . 
X 6 HOH D 11 611 611 HOH HOH . 
X 6 HOH D 12 612 612 HOH HOH . 
X 6 HOH D 13 613 613 HOH HOH . 
X 6 HOH D 14 614 614 HOH HOH . 
X 6 HOH D 15 615 615 HOH HOH . 
X 6 HOH D 16 616 616 HOH HOH . 
X 6 HOH D 17 617 617 HOH HOH . 
X 6 HOH D 18 618 618 HOH HOH . 
X 6 HOH D 19 619 619 HOH HOH . 
X 6 HOH D 20 620 620 HOH HOH . 
X 6 HOH D 21 621 621 HOH HOH . 
X 6 HOH D 22 622 622 HOH HOH . 
X 6 HOH D 23 623 623 HOH HOH . 
X 6 HOH D 24 624 624 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . J 4 16.99 20.482 43.05 1 100.87 ? S DMS 506 A 1 
HETATM 2 O O DMS . . . J 4 15.577 20.784 43.438 1 76.61 ? O DMS 506 A 1 
HETATM 3 C C1 DMS . . . J 4 17.916 22.032 42.886 1 81.73 ? C1 DMS 506 A 1 
HETATM 4 C C2 DMS . . . J 4 17.874 19.753 44.458 1 69.83 ? C2 DMS 506 A 1 
HETATM 5 H H11 DMS . . . J 4 17.521 22.597 42.082 1 98.08 ? H11 DMS 506 A 1 
HETATM 6 H H12 DMS . . . J 4 18.936 21.817 42.697 1 98.08 ? H12 DMS 506 A 1 
HETATM 7 H H13 DMS . . . J 4 17.834 22.59 43.783 1 98.08 ? H13 DMS 506 A 1 
HETATM 8 H H21 DMS . . . J 4 17.446 18.814 44.696 1 83.8 ? H21 DMS 506 A 1 
HETATM 9 H H22 DMS . . . J 4 17.797 20.397 45.295 1 83.8 ? H22 DMS 506 A 1 
HETATM 10 H H23 DMS . . . J 4 18.894 19.622 44.205 1 83.8 ? H23 DMS 506 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#