data_5TBU
#
_model_server_result.job_id            FPCUbmae4XDKuNW1BFfCPw 
_model_server_result.datetime_utc      '2024-11-22 12:20:15' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tbu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":301}' 
#
_entry.id    5TBU 
#
_exptl.entry_id    5TBU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              136.111 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            HYPOXANTHINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TBU 
_cell.length_a            99.708 
_cell.length_b            99.708 
_cell.length_c            99.708 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TBU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        198 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_544 -z,x-1/2,-y-1/2 0 0 -1 1 0 0 0 -1 0 0 -49.854 -49.854 
3 'crystal symmetry operation' 11_545 y+1/2,-z-1/2,-x 0 1 0 0 0 -1 -1 0 0 49.854 -49.854 0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C5 H4 N4 O' 
_chem_comp.formula_weight    136.111 
_chem_comp.id                HPA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              HYPOXANTHINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 HPA sing 161 n y 
N1 C6 HPA sing 162 n y 
N1 HN1 HPA sing 163 n n 
C2 N3 HPA doub 164 n y 
C2 H2 HPA sing 165 n n 
N3 C4 HPA sing 166 n y 
C4 C5 HPA doub 167 n y 
C4 N9 HPA sing 168 n y 
C5 C6 HPA sing 169 n y 
C5 N7 HPA sing 170 n y 
C6 O6 HPA doub 171 n n 
N7 C8 HPA sing 172 n y 
N7 HN7 HPA sing 173 n n 
C8 N9 HPA doub 174 n y 
C8 H8 HPA sing 175 n n 
#
_atom_sites.entry_id                     5TBU 
_atom_sites.fract_transf_matrix[1][1]    0.010029 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010029 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010029 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 HPA A 1 301 4274 HPA HPA . 
C 3 DMS A 1 302 1 DMS DMS . 
D 3 DMS A 1 303 2 DMS DMS . 
E 3 DMS A 1 304 3 DMS DMS . 
F 4 HOH A 1 401 144 HOH HOH . 
F 4 HOH A 2 402 24 HOH HOH . 
F 4 HOH A 3 403 71 HOH HOH . 
F 4 HOH A 4 404 70 HOH HOH . 
F 4 HOH A 5 405 167 HOH HOH . 
F 4 HOH A 6 406 58 HOH HOH . 
F 4 HOH A 7 407 100 HOH HOH . 
F 4 HOH A 8 408 201 HOH HOH . 
F 4 HOH A 9 409 193 HOH HOH . 
F 4 HOH A 10 410 37 HOH HOH . 
F 4 HOH A 11 411 56 HOH HOH . 
F 4 HOH A 12 412 1 HOH HOH . 
F 4 HOH A 13 413 91 HOH HOH . 
F 4 HOH A 14 414 197 HOH HOH . 
F 4 HOH A 15 415 32 HOH HOH . 
F 4 HOH A 16 416 93 HOH HOH . 
F 4 HOH A 17 417 204 HOH HOH . 
F 4 HOH A 18 418 118 HOH HOH . 
F 4 HOH A 19 419 139 HOH HOH . 
F 4 HOH A 20 420 43 HOH HOH . 
F 4 HOH A 21 421 117 HOH HOH . 
F 4 HOH A 22 422 160 HOH HOH . 
F 4 HOH A 23 423 8 HOH HOH . 
F 4 HOH A 24 424 39 HOH HOH . 
F 4 HOH A 25 425 13 HOH HOH . 
F 4 HOH A 26 426 20 HOH HOH . 
F 4 HOH A 27 427 16 HOH HOH . 
F 4 HOH A 28 428 196 HOH HOH . 
F 4 HOH A 29 429 38 HOH HOH . 
F 4 HOH A 30 430 106 HOH HOH . 
F 4 HOH A 31 431 31 HOH HOH . 
F 4 HOH A 32 432 200 HOH HOH . 
F 4 HOH A 33 433 194 HOH HOH . 
F 4 HOH A 34 434 113 HOH HOH . 
F 4 HOH A 35 435 124 HOH HOH . 
F 4 HOH A 36 436 132 HOH HOH . 
F 4 HOH A 37 437 97 HOH HOH . 
F 4 HOH A 38 438 142 HOH HOH . 
F 4 HOH A 39 439 131 HOH HOH . 
F 4 HOH A 40 440 59 HOH HOH . 
F 4 HOH A 41 441 17 HOH HOH . 
F 4 HOH A 42 442 77 HOH HOH . 
F 4 HOH A 43 443 5 HOH HOH . 
F 4 HOH A 44 444 57 HOH HOH . 
F 4 HOH A 45 445 7 HOH HOH . 
F 4 HOH A 46 446 3 HOH HOH . 
F 4 HOH A 47 447 87 HOH HOH . 
F 4 HOH A 48 448 150 HOH HOH . 
F 4 HOH A 49 449 30 HOH HOH . 
F 4 HOH A 50 450 62 HOH HOH . 
F 4 HOH A 51 451 202 HOH HOH . 
F 4 HOH A 52 452 50 HOH HOH . 
F 4 HOH A 53 453 98 HOH HOH . 
F 4 HOH A 54 454 75 HOH HOH . 
F 4 HOH A 55 455 72 HOH HOH . 
F 4 HOH A 56 456 112 HOH HOH . 
F 4 HOH A 57 457 14 HOH HOH . 
F 4 HOH A 58 458 25 HOH HOH . 
F 4 HOH A 59 459 125 HOH HOH . 
F 4 HOH A 60 460 47 HOH HOH . 
F 4 HOH A 61 461 162 HOH HOH . 
F 4 HOH A 62 462 15 HOH HOH . 
F 4 HOH A 63 463 79 HOH HOH . 
F 4 HOH A 64 464 27 HOH HOH . 
F 4 HOH A 65 465 95 HOH HOH . 
F 4 HOH A 66 466 11 HOH HOH . 
F 4 HOH A 67 467 12 HOH HOH . 
F 4 HOH A 68 468 161 HOH HOH . 
F 4 HOH A 69 469 51 HOH HOH . 
F 4 HOH A 70 470 34 HOH HOH . 
F 4 HOH A 71 471 156 HOH HOH . 
F 4 HOH A 72 472 88 HOH HOH . 
F 4 HOH A 73 473 129 HOH HOH . 
F 4 HOH A 74 474 78 HOH HOH . 
F 4 HOH A 75 475 182 HOH HOH . 
F 4 HOH A 76 476 4 HOH HOH . 
F 4 HOH A 77 477 183 HOH HOH . 
F 4 HOH A 78 478 6 HOH HOH . 
F 4 HOH A 79 479 9 HOH HOH . 
F 4 HOH A 80 480 18 HOH HOH . 
F 4 HOH A 81 481 23 HOH HOH . 
F 4 HOH A 82 482 154 HOH HOH . 
F 4 HOH A 83 483 190 HOH HOH . 
F 4 HOH A 84 484 173 HOH HOH . 
F 4 HOH A 85 485 92 HOH HOH . 
F 4 HOH A 86 486 146 HOH HOH . 
F 4 HOH A 87 487 76 HOH HOH . 
F 4 HOH A 88 488 22 HOH HOH . 
F 4 HOH A 89 489 48 HOH HOH . 
F 4 HOH A 90 490 60 HOH HOH . 
F 4 HOH A 91 491 28 HOH HOH . 
F 4 HOH A 92 492 81 HOH HOH . 
F 4 HOH A 93 493 157 HOH HOH . 
F 4 HOH A 94 494 46 HOH HOH . 
F 4 HOH A 95 495 2 HOH HOH . 
F 4 HOH A 96 496 109 HOH HOH . 
F 4 HOH A 97 497 191 HOH HOH . 
F 4 HOH A 98 498 73 HOH HOH . 
F 4 HOH A 99 499 42 HOH HOH . 
F 4 HOH A 100 500 164 HOH HOH . 
F 4 HOH A 101 501 115 HOH HOH . 
F 4 HOH A 102 502 133 HOH HOH . 
F 4 HOH A 103 503 89 HOH HOH . 
F 4 HOH A 104 504 66 HOH HOH . 
F 4 HOH A 105 505 148 HOH HOH . 
F 4 HOH A 106 506 67 HOH HOH . 
F 4 HOH A 107 507 65 HOH HOH . 
F 4 HOH A 108 508 152 HOH HOH . 
F 4 HOH A 109 509 184 HOH HOH . 
F 4 HOH A 110 510 136 HOH HOH . 
F 4 HOH A 111 511 61 HOH HOH . 
F 4 HOH A 112 512 155 HOH HOH . 
F 4 HOH A 113 513 10 HOH HOH . 
F 4 HOH A 114 514 94 HOH HOH . 
F 4 HOH A 115 515 127 HOH HOH . 
F 4 HOH A 116 516 134 HOH HOH . 
F 4 HOH A 117 517 216 HOH HOH . 
F 4 HOH A 118 518 21 HOH HOH . 
F 4 HOH A 119 519 99 HOH HOH . 
F 4 HOH A 120 520 189 HOH HOH . 
F 4 HOH A 121 521 140 HOH HOH . 
F 4 HOH A 122 522 55 HOH HOH . 
F 4 HOH A 123 523 186 HOH HOH . 
F 4 HOH A 124 524 107 HOH HOH . 
F 4 HOH A 125 525 143 HOH HOH . 
F 4 HOH A 126 526 29 HOH HOH . 
F 4 HOH A 127 527 180 HOH HOH . 
F 4 HOH A 128 528 138 HOH HOH . 
F 4 HOH A 129 529 114 HOH HOH . 
F 4 HOH A 130 530 80 HOH HOH . 
F 4 HOH A 131 531 101 HOH HOH . 
F 4 HOH A 132 532 19 HOH HOH . 
F 4 HOH A 133 533 153 HOH HOH . 
F 4 HOH A 134 534 69 HOH HOH . 
F 4 HOH A 135 535 41 HOH HOH . 
F 4 HOH A 136 536 85 HOH HOH . 
F 4 HOH A 137 537 40 HOH HOH . 
F 4 HOH A 138 538 126 HOH HOH . 
F 4 HOH A 139 539 123 HOH HOH . 
F 4 HOH A 140 540 53 HOH HOH . 
F 4 HOH A 141 541 116 HOH HOH . 
F 4 HOH A 142 542 35 HOH HOH . 
F 4 HOH A 143 543 176 HOH HOH . 
F 4 HOH A 144 544 26 HOH HOH . 
F 4 HOH A 145 545 54 HOH HOH . 
F 4 HOH A 146 546 214 HOH HOH . 
F 4 HOH A 147 547 82 HOH HOH . 
F 4 HOH A 148 548 63 HOH HOH . 
F 4 HOH A 149 549 215 HOH HOH . 
F 4 HOH A 150 550 172 HOH HOH . 
F 4 HOH A 151 551 166 HOH HOH . 
F 4 HOH A 152 552 36 HOH HOH . 
F 4 HOH A 153 553 145 HOH HOH . 
F 4 HOH A 154 554 221 HOH HOH . 
F 4 HOH A 155 555 128 HOH HOH . 
F 4 HOH A 156 556 208 HOH HOH . 
F 4 HOH A 157 557 158 HOH HOH . 
F 4 HOH A 158 558 169 HOH HOH . 
F 4 HOH A 159 559 210 HOH HOH . 
F 4 HOH A 160 560 199 HOH HOH . 
F 4 HOH A 161 561 122 HOH HOH . 
F 4 HOH A 162 562 111 HOH HOH . 
F 4 HOH A 163 563 185 HOH HOH . 
F 4 HOH A 164 564 149 HOH HOH . 
F 4 HOH A 165 565 120 HOH HOH . 
F 4 HOH A 166 566 220 HOH HOH . 
F 4 HOH A 167 567 121 HOH HOH . 
F 4 HOH A 168 568 225 HOH HOH . 
F 4 HOH A 169 569 33 HOH HOH . 
F 4 HOH A 170 570 168 HOH HOH . 
F 4 HOH A 171 571 211 HOH HOH . 
F 4 HOH A 172 572 104 HOH HOH . 
F 4 HOH A 173 573 163 HOH HOH . 
F 4 HOH A 174 574 49 HOH HOH . 
F 4 HOH A 175 575 90 HOH HOH . 
F 4 HOH A 176 576 177 HOH HOH . 
F 4 HOH A 177 577 151 HOH HOH . 
F 4 HOH A 178 578 159 HOH HOH . 
F 4 HOH A 179 579 45 HOH HOH . 
F 4 HOH A 180 580 84 HOH HOH . 
F 4 HOH A 181 581 74 HOH HOH . 
F 4 HOH A 182 582 110 HOH HOH . 
F 4 HOH A 183 583 119 HOH HOH . 
F 4 HOH A 184 584 130 HOH HOH . 
F 4 HOH A 185 585 103 HOH HOH . 
F 4 HOH A 186 586 83 HOH HOH . 
F 4 HOH A 187 587 44 HOH HOH . 
F 4 HOH A 188 588 170 HOH HOH . 
F 4 HOH A 189 589 203 HOH HOH . 
F 4 HOH A 190 590 137 HOH HOH . 
F 4 HOH A 191 591 174 HOH HOH . 
F 4 HOH A 192 592 68 HOH HOH . 
F 4 HOH A 193 593 171 HOH HOH . 
F 4 HOH A 194 594 205 HOH HOH . 
F 4 HOH A 195 595 165 HOH HOH . 
F 4 HOH A 196 596 192 HOH HOH . 
F 4 HOH A 197 597 188 HOH HOH . 
F 4 HOH A 198 598 219 HOH HOH . 
F 4 HOH A 199 599 108 HOH HOH . 
F 4 HOH A 200 600 96 HOH HOH . 
F 4 HOH A 201 601 209 HOH HOH . 
F 4 HOH A 202 602 223 HOH HOH . 
F 4 HOH A 203 603 217 HOH HOH . 
F 4 HOH A 204 604 178 HOH HOH . 
F 4 HOH A 205 605 222 HOH HOH . 
F 4 HOH A 206 606 102 HOH HOH . 
F 4 HOH A 207 607 213 HOH HOH . 
F 4 HOH A 208 608 207 HOH HOH . 
F 4 HOH A 209 609 175 HOH HOH . 
F 4 HOH A 210 610 64 HOH HOH . 
F 4 HOH A 211 611 105 HOH HOH . 
F 4 HOH A 212 612 181 HOH HOH . 
F 4 HOH A 213 613 187 HOH HOH . 
F 4 HOH A 214 614 86 HOH HOH . 
F 4 HOH A 215 615 195 HOH HOH . 
F 4 HOH A 216 616 179 HOH HOH . 
F 4 HOH A 217 617 141 HOH HOH . 
F 4 HOH A 218 618 198 HOH HOH . 
F 4 HOH A 219 619 147 HOH HOH . 
F 4 HOH A 220 620 52 HOH HOH . 
F 4 HOH A 221 621 226 HOH HOH . 
F 4 HOH A 222 622 212 HOH HOH . 
F 4 HOH A 223 623 135 HOH HOH . 
F 4 HOH A 224 624 206 HOH HOH . 
F 4 HOH A 225 625 224 HOH HOH . 
F 4 HOH A 226 626 218 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 HPA . . . B 2 -5.018 -27.449 -4.063 1 17.17 ? N1 HPA 301 A 1 
HETATM 2 C C2 HPA . . . B 2 -4.199 -26.365 -3.819 1 17.17 ? C2 HPA 301 A 1 
HETATM 3 N N3 HPA . . . B 2 -2.839 -26.454 -4.037 1 14.37 ? N3 HPA 301 A 1 
HETATM 4 C C4 HPA . . . B 2 -2.296 -27.61 -4.493 1 15.47 ? C4 HPA 301 A 1 
HETATM 5 C C5 HPA . . . B 2 -3.105 -28.711 -4.743 1 17.05 ? C5 HPA 301 A 1 
HETATM 6 C C6 HPA . . . B 2 -4.474 -28.628 -4.526 1 16.94 ? C6 HPA 301 A 1 
HETATM 7 O O6 HPA . . . B 2 -5.19 -29.618 -4.669 1 17.2 ? O6 HPA 301 A 1 
HETATM 8 N N7 HPA . . . B 2 -2.308 -29.709 -5.181 1 17.79 ? N7 HPA 301 A 1 
HETATM 9 C C8 HPA . . . B 2 -1.037 -29.248 -5.206 1 16.6 ? C8 HPA 301 A 1 
HETATM 10 N N9 HPA . . . B 2 -1.028 -27.964 -4.784 1 13.68 ? N9 HPA 301 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           10 
#