data_5TCK # _model_server_result.job_id wI8jFdHmMz2DCSZrDnPXwg _model_server_result.datetime_utc '2024-11-28 22:01:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tck # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":801}' # _entry.id 5TCK # _exptl.entry_id 5TCK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.444 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description Bromosporine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TCK _cell.length_a 34.245 _cell.length_b 74.086 _cell.length_c 106.412 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TCK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,K 1 1 B,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 62 A CYS 205 1_555 D S2 BME . A BME 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? covale ? covale2 A SG CYS 110 A CYS 253 1_555 E S SX . A SX 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? covale ? covale3 B SG CYS 62 B CYS 205 1_555 H S2 BME . B BME 802 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? covale ? covale4 B SG CYS 110 B CYS 253 1_555 I S SX . B SX 803 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? # _chem_comp.formula 'C17 H20 N6 O4 S' _chem_comp.formula_weight 404.444 _chem_comp.id BMF _chem_comp.mon_nstd_flag . _chem_comp.name Bromosporine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ethyl (3-methyl-6-{4-methyl-3-[(methylsulfonyl)amino]phenyl}[1,2,4]triazolo[4,3-b]pyridazin-8-yl)carbamate' # _atom_sites.entry_id 5TCK _atom_sites.fract_transf_matrix[1][1] 0.029201 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013498 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009397 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 BMF A 1 401 802 BMF BMF . D 3 BME A 1 402 1 BME BME . E 4 SX A 1 403 2 SX SX . F 5 EDO A 1 404 2003 EDO EDO . G 2 BMF B 1 801 801 BMF BMF . H 3 BME B 1 802 3 BME BME . I 4 SX B 1 803 4 SX SX . J 5 EDO B 1 804 2002 EDO EDO . K 6 HOH A 1 501 58 HOH HOH . K 6 HOH A 2 502 2061 HOH HOH . K 6 HOH A 3 503 2142 HOH HOH . K 6 HOH A 4 504 2048 HOH HOH . K 6 HOH A 5 505 20 HOH HOH . K 6 HOH A 6 506 2056 HOH HOH . K 6 HOH A 7 507 2094 HOH HOH . K 6 HOH A 8 508 2100 HOH HOH . K 6 HOH A 9 509 2109 HOH HOH . K 6 HOH A 10 510 2022 HOH HOH . K 6 HOH A 11 511 2036 HOH HOH . K 6 HOH A 12 512 15 HOH HOH . K 6 HOH A 13 513 2103 HOH HOH . K 6 HOH A 14 514 2133 HOH HOH . K 6 HOH A 15 515 59 HOH HOH . K 6 HOH A 16 516 2093 HOH HOH . K 6 HOH A 17 517 2150 HOH HOH . K 6 HOH A 18 518 26 HOH HOH . K 6 HOH A 19 519 27 HOH HOH . K 6 HOH A 20 520 2070 HOH HOH . K 6 HOH A 21 521 2322 HOH HOH . K 6 HOH A 22 522 33 HOH HOH . K 6 HOH A 23 523 2146 HOH HOH . K 6 HOH A 24 524 2067 HOH HOH . K 6 HOH A 25 525 2307 HOH HOH . K 6 HOH A 26 526 4 HOH HOH . K 6 HOH A 27 527 2134 HOH HOH . K 6 HOH A 28 528 47 HOH HOH . K 6 HOH A 29 529 2012 HOH HOH . K 6 HOH A 30 530 2040 HOH HOH . K 6 HOH A 31 531 30 HOH HOH . K 6 HOH A 32 532 2135 HOH HOH . K 6 HOH A 33 533 16 HOH HOH . K 6 HOH A 34 534 2041 HOH HOH . K 6 HOH A 35 535 2309 HOH HOH . K 6 HOH A 36 536 2108 HOH HOH . K 6 HOH A 37 537 2084 HOH HOH . K 6 HOH A 38 538 3 HOH HOH . K 6 HOH A 39 539 2019 HOH HOH . K 6 HOH A 40 540 2164 HOH HOH . K 6 HOH A 41 541 13 HOH HOH . K 6 HOH A 42 542 2099 HOH HOH . K 6 HOH A 43 543 2168 HOH HOH . K 6 HOH A 44 544 2128 HOH HOH . K 6 HOH A 45 545 2015 HOH HOH . K 6 HOH A 46 546 57 HOH HOH . K 6 HOH A 47 547 2163 HOH HOH . K 6 HOH A 48 548 2083 HOH HOH . K 6 HOH A 49 549 2011 HOH HOH . K 6 HOH A 50 550 2167 HOH HOH . K 6 HOH A 51 551 2152 HOH HOH . K 6 HOH A 52 552 2110 HOH HOH . K 6 HOH A 53 553 2126 HOH HOH . K 6 HOH A 54 554 2046 HOH HOH . K 6 HOH A 55 555 2132 HOH HOH . K 6 HOH A 56 556 2131 HOH HOH . K 6 HOH A 57 557 2111 HOH HOH . K 6 HOH A 58 558 60 HOH HOH . K 6 HOH A 59 559 2320 HOH HOH . K 6 HOH A 60 560 2092 HOH HOH . K 6 HOH A 61 561 2162 HOH HOH . K 6 HOH A 62 562 2308 HOH HOH . K 6 HOH A 63 563 2144 HOH HOH . K 6 HOH A 64 564 11 HOH HOH . K 6 HOH A 65 565 31 HOH HOH . K 6 HOH A 66 566 2149 HOH HOH . K 6 HOH A 67 567 2101 HOH HOH . K 6 HOH A 68 568 2130 HOH HOH . K 6 HOH A 69 569 61 HOH HOH . K 6 HOH A 70 570 5 HOH HOH . K 6 HOH A 71 571 17 HOH HOH . K 6 HOH A 72 572 56 HOH HOH . K 6 HOH A 73 573 2121 HOH HOH . K 6 HOH A 74 574 2068 HOH HOH . K 6 HOH A 75 575 6 HOH HOH . K 6 HOH A 76 576 2075 HOH HOH . K 6 HOH A 77 577 2124 HOH HOH . K 6 HOH A 78 578 55 HOH HOH . K 6 HOH A 79 579 19 HOH HOH . K 6 HOH A 80 580 2169 HOH HOH . K 6 HOH A 81 581 2310 HOH HOH . K 6 HOH A 82 582 2321 HOH HOH . K 6 HOH A 83 583 2039 HOH HOH . K 6 HOH A 84 584 2082 HOH HOH . K 6 HOH A 85 585 29 HOH HOH . K 6 HOH A 86 586 2125 HOH HOH . K 6 HOH A 87 587 54 HOH HOH . K 6 HOH A 88 588 53 HOH HOH . K 6 HOH A 89 589 2105 HOH HOH . L 6 HOH B 1 901 2090 HOH HOH . L 6 HOH B 2 902 48 HOH HOH . L 6 HOH B 3 903 22 HOH HOH . L 6 HOH B 4 904 43 HOH HOH . L 6 HOH B 5 905 2319 HOH HOH . L 6 HOH B 6 906 2031 HOH HOH . L 6 HOH B 7 907 35 HOH HOH . L 6 HOH B 8 908 2076 HOH HOH . L 6 HOH B 9 909 38 HOH HOH . L 6 HOH B 10 910 2127 HOH HOH . L 6 HOH B 11 911 2137 HOH HOH . L 6 HOH B 12 912 2025 HOH HOH . L 6 HOH B 13 913 2148 HOH HOH . L 6 HOH B 14 914 2073 HOH HOH . L 6 HOH B 15 915 2081 HOH HOH . L 6 HOH B 16 916 2161 HOH HOH . L 6 HOH B 17 917 2301 HOH HOH . L 6 HOH B 18 918 2138 HOH HOH . L 6 HOH B 19 919 2089 HOH HOH . L 6 HOH B 20 920 7 HOH HOH . L 6 HOH B 21 921 2305 HOH HOH . L 6 HOH B 22 922 2140 HOH HOH . L 6 HOH B 23 923 40 HOH HOH . L 6 HOH B 24 924 2119 HOH HOH . L 6 HOH B 25 925 2020 HOH HOH . L 6 HOH B 26 926 23 HOH HOH . L 6 HOH B 27 927 2324 HOH HOH . L 6 HOH B 28 928 9 HOH HOH . L 6 HOH B 29 929 2136 HOH HOH . L 6 HOH B 30 930 2139 HOH HOH . L 6 HOH B 31 931 42 HOH HOH . L 6 HOH B 32 932 2030 HOH HOH . L 6 HOH B 33 933 2157 HOH HOH . L 6 HOH B 34 934 2014 HOH HOH . L 6 HOH B 35 935 2095 HOH HOH . L 6 HOH B 36 936 2156 HOH HOH . L 6 HOH B 37 937 2311 HOH HOH . L 6 HOH B 38 938 2155 HOH HOH . L 6 HOH B 39 939 41 HOH HOH . L 6 HOH B 40 940 2116 HOH HOH . L 6 HOH B 41 941 2143 HOH HOH . L 6 HOH B 42 942 2028 HOH HOH . L 6 HOH B 43 943 44 HOH HOH . L 6 HOH B 44 944 2085 HOH HOH . L 6 HOH B 45 945 2141 HOH HOH . L 6 HOH B 46 946 2033 HOH HOH . L 6 HOH B 47 947 2106 HOH HOH . L 6 HOH B 48 948 39 HOH HOH . L 6 HOH B 49 949 2096 HOH HOH . L 6 HOH B 50 950 2065 HOH HOH . L 6 HOH B 51 951 2159 HOH HOH . L 6 HOH B 52 952 2112 HOH HOH . L 6 HOH B 53 953 2313 HOH HOH . L 6 HOH B 54 954 2004 HOH HOH . L 6 HOH B 55 955 1 HOH HOH . L 6 HOH B 56 956 2058 HOH HOH . L 6 HOH B 57 957 49 HOH HOH . L 6 HOH B 58 958 2151 HOH HOH . L 6 HOH B 59 959 2044 HOH HOH . L 6 HOH B 60 960 2323 HOH HOH . L 6 HOH B 61 961 2304 HOH HOH . L 6 HOH B 62 962 2072 HOH HOH . L 6 HOH B 63 963 2018 HOH HOH . L 6 HOH B 64 964 2166 HOH HOH . L 6 HOH B 65 965 2059 HOH HOH . L 6 HOH B 66 966 2034 HOH HOH . L 6 HOH B 67 967 2154 HOH HOH . L 6 HOH B 68 968 2123 HOH HOH . L 6 HOH B 69 969 2057 HOH HOH . L 6 HOH B 70 970 2032 HOH HOH . L 6 HOH B 71 971 2074 HOH HOH . L 6 HOH B 72 972 2314 HOH HOH . L 6 HOH B 73 973 25 HOH HOH . L 6 HOH B 74 974 36 HOH HOH . L 6 HOH B 75 975 24 HOH HOH . L 6 HOH B 76 976 2145 HOH HOH . L 6 HOH B 77 977 2312 HOH HOH . L 6 HOH B 78 978 2160 HOH HOH . L 6 HOH B 79 979 2158 HOH HOH . L 6 HOH B 80 980 2 HOH HOH . L 6 HOH B 81 981 2325 HOH HOH . L 6 HOH B 82 982 10 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 BMF . . . G 2 13.835 42.893 3.548 1 34 ? C10 BMF 801 B 1 HETATM 2 N N12 BMF . . . G 2 13.547 40.587 3.945 1 30.57 ? N12 BMF 801 B 1 HETATM 3 C C15 BMF . . . G 2 14.35 40.799 6.701 1 31.35 ? C15 BMF 801 B 1 HETATM 4 C C17 BMF . . . G 2 15.192 41.894 8.758 1 35.65 ? C17 BMF 801 B 1 HETATM 5 C C20 BMF . . . G 2 16.165 42.092 12.264 1 40.71 ? C20 BMF 801 B 1 HETATM 6 C C22 BMF . . . G 2 14.319 41.868 5.835 1 30.84 ? C22 BMF 801 B 1 HETATM 7 C C26 BMF . . . G 2 12.845 37.734 3.203 1 28.79 ? C26 BMF 801 B 1 HETATM 8 C C28 BMF . . . G 2 14.641 45.045 2.813 1 33.13 ? C28 BMF 801 B 1 HETATM 9 C C01 BMF . . . G 2 13.818 46.167 0.7 1 31.01 ? C01 BMF 801 B 1 HETATM 10 C C02 BMF . . . G 2 13.839 45.006 1.67 1 34.73 ? C02 BMF 801 B 1 HETATM 11 C C03 BMF . . . G 2 13.016 43.868 1.489 1 37.06 ? C03 BMF 801 B 1 HETATM 12 N N04 BMF . . . G 2 12.117 43.789 0.375 1 36.32 ? N04 BMF 801 B 1 HETATM 13 S S05 BMF . . . G 2 10.498 43.608 0.451 1 41.94 ? S05 BMF 801 B 1 HETATM 14 C C06 BMF . . . G 2 9.872 45.025 1.263 1 42.74 ? C06 BMF 801 B 1 HETATM 15 O O07 BMF . . . G 2 10.025 43.618 -0.898 1 44.98 ? O07 BMF 801 B 1 HETATM 16 O O08 BMF . . . G 2 10.225 42.466 1.265 1 46.76 ? O08 BMF 801 B 1 HETATM 17 C C09 BMF . . . G 2 13.034 42.824 2.413 1 33.91 ? C09 BMF 801 B 1 HETATM 18 C C11 BMF . . . G 2 13.911 41.74 4.463 1 34.27 ? C11 BMF 801 B 1 HETATM 19 N N13 BMF . . . G 2 13.582 39.519 4.828 1 31.17 ? N13 BMF 801 B 1 HETATM 20 C C14 BMF . . . G 2 13.949 39.538 6.157 1 31.92 ? C14 BMF 801 B 1 HETATM 21 N N16 BMF . . . G 2 14.69 40.809 8.075 1 34.46 ? N16 BMF 801 B 1 HETATM 22 O O18 BMF . . . G 2 15.373 41.569 10.06 1 37.52 ? O18 BMF 801 B 1 HETATM 23 C C19 BMF . . . G 2 15.818 42.652 10.944 1 40.1 ? C19 BMF 801 B 1 HETATM 24 O O21 BMF . . . G 2 15.461 42.974 8.269 1 31.46 ? O21 BMF 801 B 1 HETATM 25 N N23 BMF . . . G 2 13.812 38.318 6.656 1 31.3 ? N23 BMF 801 B 1 HETATM 26 N N24 BMF . . . G 2 13.351 37.494 5.629 1 29.51 ? N24 BMF 801 B 1 HETATM 27 C C25 BMF . . . G 2 13.233 38.219 4.552 1 29.67 ? C25 BMF 801 B 1 HETATM 28 C C27 BMF . . . G 2 14.628 44.026 3.748 1 33.2 ? C27 BMF 801 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 241 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 28 #