data_5TCM
#
_model_server_result.job_id            p50C_N9jn0lfI5Feim4-9Q 
_model_server_result.datetime_utc      '2024-11-24 22:31:17' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tcm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":203}' 
#
_entry.id    5TCM 
#
_exptl.entry_id    5TCM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          94.46 
_cell.angle_gamma         90 
_cell.entry_id            5TCM 
_cell.length_a            101.332 
_cell.length_b            85.25 
_cell.length_c            57.277 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TCM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
PISA monomeric 1 author_and_software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,D,E,J 1 1 
B,F,G,H,K 2 1 
C,I,L 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 G N N 
? 3 H N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     5TCM 
_atom_sites.fract_transf_matrix[1][1]    0.009869 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00077 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01173 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.017512 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 R78 A 1 201 200 R78 R78 . 
E 3 EDO A 1 202 1 EDO EDO . 
F 2 R78 B 1 201 200 R78 R78 . 
G 3 EDO B 1 202 2 EDO EDO . 
H 3 EDO B 1 203 3 EDO EDO . 
I 2 R78 C 1 200 200 R78 R78 . 
J 4 HOH A 1 301 56 HOH HOH . 
J 4 HOH A 2 302 91 HOH HOH . 
J 4 HOH A 3 303 50 HOH HOH . 
J 4 HOH A 4 304 103 HOH HOH . 
J 4 HOH A 5 305 219 HOH HOH . 
J 4 HOH A 6 306 147 HOH HOH . 
J 4 HOH A 7 307 53 HOH HOH . 
J 4 HOH A 8 308 18 HOH HOH . 
J 4 HOH A 9 309 8 HOH HOH . 
J 4 HOH A 10 310 173 HOH HOH . 
J 4 HOH A 11 311 159 HOH HOH . 
J 4 HOH A 12 312 98 HOH HOH . 
J 4 HOH A 13 313 59 HOH HOH . 
J 4 HOH A 14 314 92 HOH HOH . 
J 4 HOH A 15 315 252 HOH HOH . 
J 4 HOH A 16 316 36 HOH HOH . 
J 4 HOH A 17 317 259 HOH HOH . 
J 4 HOH A 18 318 19 HOH HOH . 
J 4 HOH A 19 319 55 HOH HOH . 
J 4 HOH A 20 320 102 HOH HOH . 
J 4 HOH A 21 321 230 HOH HOH . 
J 4 HOH A 22 322 260 HOH HOH . 
J 4 HOH A 23 323 23 HOH HOH . 
J 4 HOH A 24 324 170 HOH HOH . 
J 4 HOH A 25 325 22 HOH HOH . 
J 4 HOH A 26 326 79 HOH HOH . 
J 4 HOH A 27 327 13 HOH HOH . 
J 4 HOH A 28 328 149 HOH HOH . 
J 4 HOH A 29 329 57 HOH HOH . 
J 4 HOH A 30 330 29 HOH HOH . 
J 4 HOH A 31 331 58 HOH HOH . 
J 4 HOH A 32 332 152 HOH HOH . 
J 4 HOH A 33 333 228 HOH HOH . 
J 4 HOH A 34 334 229 HOH HOH . 
J 4 HOH A 35 335 101 HOH HOH . 
J 4 HOH A 36 336 100 HOH HOH . 
J 4 HOH A 37 337 167 HOH HOH . 
J 4 HOH A 38 338 105 HOH HOH . 
J 4 HOH A 39 339 202 HOH HOH . 
J 4 HOH A 40 340 150 HOH HOH . 
J 4 HOH A 41 341 148 HOH HOH . 
J 4 HOH A 42 342 163 HOH HOH . 
J 4 HOH A 43 343 265 HOH HOH . 
J 4 HOH A 44 344 41 HOH HOH . 
J 4 HOH A 45 345 54 HOH HOH . 
J 4 HOH A 46 346 213 HOH HOH . 
J 4 HOH A 47 347 97 HOH HOH . 
J 4 HOH A 48 348 210 HOH HOH . 
J 4 HOH A 49 349 156 HOH HOH . 
J 4 HOH A 50 350 6 HOH HOH . 
J 4 HOH A 51 351 49 HOH HOH . 
J 4 HOH A 52 352 257 HOH HOH . 
J 4 HOH A 53 353 160 HOH HOH . 
J 4 HOH A 54 354 172 HOH HOH . 
J 4 HOH A 55 355 216 HOH HOH . 
J 4 HOH A 56 356 93 HOH HOH . 
J 4 HOH A 57 357 209 HOH HOH . 
J 4 HOH A 58 358 225 HOH HOH . 
J 4 HOH A 59 359 47 HOH HOH . 
J 4 HOH A 60 360 166 HOH HOH . 
J 4 HOH A 61 361 264 HOH HOH . 
J 4 HOH A 62 362 168 HOH HOH . 
J 4 HOH A 63 363 157 HOH HOH . 
J 4 HOH A 64 364 158 HOH HOH . 
J 4 HOH A 65 365 258 HOH HOH . 
J 4 HOH A 66 366 171 HOH HOH . 
K 4 HOH B 1 301 61 HOH HOH . 
K 4 HOH B 2 302 69 HOH HOH . 
K 4 HOH B 3 303 65 HOH HOH . 
K 4 HOH B 4 304 113 HOH HOH . 
K 4 HOH B 5 305 25 HOH HOH . 
K 4 HOH B 6 306 227 HOH HOH . 
K 4 HOH B 7 307 94 HOH HOH . 
K 4 HOH B 8 308 16 HOH HOH . 
K 4 HOH B 9 309 10 HOH HOH . 
K 4 HOH B 10 310 30 HOH HOH . 
K 4 HOH B 11 311 188 HOH HOH . 
K 4 HOH B 12 312 115 HOH HOH . 
K 4 HOH B 13 313 182 HOH HOH . 
K 4 HOH B 14 314 117 HOH HOH . 
K 4 HOH B 15 315 183 HOH HOH . 
K 4 HOH B 16 316 187 HOH HOH . 
K 4 HOH B 17 317 104 HOH HOH . 
K 4 HOH B 18 318 184 HOH HOH . 
K 4 HOH B 19 319 46 HOH HOH . 
K 4 HOH B 20 320 63 HOH HOH . 
K 4 HOH B 21 321 112 HOH HOH . 
K 4 HOH B 22 322 9 HOH HOH . 
K 4 HOH B 23 323 118 HOH HOH . 
K 4 HOH B 24 324 123 HOH HOH . 
K 4 HOH B 25 325 39 HOH HOH . 
K 4 HOH B 26 326 70 HOH HOH . 
K 4 HOH B 27 327 241 HOH HOH . 
K 4 HOH B 28 328 7 HOH HOH . 
K 4 HOH B 29 329 186 HOH HOH . 
K 4 HOH B 30 330 254 HOH HOH . 
K 4 HOH B 31 331 5 HOH HOH . 
K 4 HOH B 32 332 109 HOH HOH . 
K 4 HOH B 33 333 121 HOH HOH . 
K 4 HOH B 34 334 28 HOH HOH . 
K 4 HOH B 35 335 108 HOH HOH . 
K 4 HOH B 36 336 190 HOH HOH . 
K 4 HOH B 37 337 192 HOH HOH . 
K 4 HOH B 38 338 185 HOH HOH . 
K 4 HOH B 39 339 11 HOH HOH . 
K 4 HOH B 40 340 114 HOH HOH . 
K 4 HOH B 41 341 4 HOH HOH . 
K 4 HOH B 42 342 122 HOH HOH . 
K 4 HOH B 43 343 66 HOH HOH . 
K 4 HOH B 44 344 68 HOH HOH . 
K 4 HOH B 45 345 72 HOH HOH . 
K 4 HOH B 46 346 64 HOH HOH . 
K 4 HOH B 47 347 181 HOH HOH . 
K 4 HOH B 48 348 106 HOH HOH . 
K 4 HOH B 49 349 240 HOH HOH . 
K 4 HOH B 50 350 67 HOH HOH . 
K 4 HOH B 51 351 111 HOH HOH . 
K 4 HOH B 52 352 238 HOH HOH . 
K 4 HOH B 53 353 176 HOH HOH . 
K 4 HOH B 54 354 71 HOH HOH . 
K 4 HOH B 55 355 177 HOH HOH . 
K 4 HOH B 56 356 62 HOH HOH . 
K 4 HOH B 57 357 237 HOH HOH . 
K 4 HOH B 58 358 27 HOH HOH . 
K 4 HOH B 59 359 189 HOH HOH . 
K 4 HOH B 60 360 261 HOH HOH . 
K 4 HOH B 61 361 262 HOH HOH . 
K 4 HOH B 62 362 33 HOH HOH . 
K 4 HOH B 63 363 119 HOH HOH . 
K 4 HOH B 64 364 43 HOH HOH . 
K 4 HOH B 65 365 193 HOH HOH . 
K 4 HOH B 66 366 178 HOH HOH . 
K 4 HOH B 67 367 239 HOH HOH . 
K 4 HOH B 68 368 34 HOH HOH . 
K 4 HOH B 69 369 255 HOH HOH . 
K 4 HOH B 70 370 44 HOH HOH . 
K 4 HOH B 71 371 136 HOH HOH . 
K 4 HOH B 72 372 21 HOH HOH . 
K 4 HOH B 73 373 253 HOH HOH . 
K 4 HOH B 74 374 174 HOH HOH . 
K 4 HOH B 75 375 236 HOH HOH . 
K 4 HOH B 76 376 179 HOH HOH . 
L 4 HOH C 1 301 135 HOH HOH . 
L 4 HOH C 2 302 129 HOH HOH . 
L 4 HOH C 3 303 76 HOH HOH . 
L 4 HOH C 4 304 88 HOH HOH . 
L 4 HOH C 5 305 1 HOH HOH . 
L 4 HOH C 6 306 80 HOH HOH . 
L 4 HOH C 7 307 74 HOH HOH . 
L 4 HOH C 8 308 77 HOH HOH . 
L 4 HOH C 9 309 78 HOH HOH . 
L 4 HOH C 10 310 132 HOH HOH . 
L 4 HOH C 11 311 144 HOH HOH . 
L 4 HOH C 12 312 139 HOH HOH . 
L 4 HOH C 13 313 153 HOH HOH . 
L 4 HOH C 14 314 195 HOH HOH . 
L 4 HOH C 15 315 131 HOH HOH . 
L 4 HOH C 16 316 85 HOH HOH . 
L 4 HOH C 17 317 60 HOH HOH . 
L 4 HOH C 18 318 107 HOH HOH . 
L 4 HOH C 19 319 120 HOH HOH . 
L 4 HOH C 20 320 20 HOH HOH . 
L 4 HOH C 21 321 83 HOH HOH . 
L 4 HOH C 22 322 73 HOH HOH . 
L 4 HOH C 23 323 247 HOH HOH . 
L 4 HOH C 24 324 24 HOH HOH . 
L 4 HOH C 25 325 196 HOH HOH . 
L 4 HOH C 26 326 251 HOH HOH . 
L 4 HOH C 27 327 137 HOH HOH . 
L 4 HOH C 28 328 17 HOH HOH . 
L 4 HOH C 29 329 52 HOH HOH . 
L 4 HOH C 30 330 143 HOH HOH . 
L 4 HOH C 31 331 126 HOH HOH . 
L 4 HOH C 32 332 45 HOH HOH . 
L 4 HOH C 33 333 35 HOH HOH . 
L 4 HOH C 34 334 133 HOH HOH . 
L 4 HOH C 35 335 116 HOH HOH . 
L 4 HOH C 36 336 86 HOH HOH . 
L 4 HOH C 37 337 246 HOH HOH . 
L 4 HOH C 38 338 205 HOH HOH . 
L 4 HOH C 39 339 130 HOH HOH . 
L 4 HOH C 40 340 124 HOH HOH . 
L 4 HOH C 41 341 125 HOH HOH . 
L 4 HOH C 42 342 201 HOH HOH . 
L 4 HOH C 43 343 38 HOH HOH . 
L 4 HOH C 44 344 89 HOH HOH . 
L 4 HOH C 45 345 96 HOH HOH . 
L 4 HOH C 46 346 146 HOH HOH . 
L 4 HOH C 47 347 142 HOH HOH . 
L 4 HOH C 48 348 206 HOH HOH . 
L 4 HOH C 49 349 3 HOH HOH . 
L 4 HOH C 50 350 138 HOH HOH . 
L 4 HOH C 51 351 199 HOH HOH . 
L 4 HOH C 52 352 75 HOH HOH . 
L 4 HOH C 53 353 12 HOH HOH . 
L 4 HOH C 54 354 197 HOH HOH . 
L 4 HOH C 55 355 84 HOH HOH . 
L 4 HOH C 56 356 95 HOH HOH . 
L 4 HOH C 57 357 200 HOH HOH . 
L 4 HOH C 58 358 245 HOH HOH . 
L 4 HOH C 59 359 248 HOH HOH . 
L 4 HOH C 60 360 198 HOH HOH . 
L 4 HOH C 61 361 154 HOH HOH . 
L 4 HOH C 62 362 87 HOH HOH . 
L 4 HOH C 63 363 263 HOH HOH . 
L 4 HOH C 64 364 194 HOH HOH . 
L 4 HOH C 65 365 128 HOH HOH . 
L 4 HOH C 66 366 244 HOH HOH . 
L 4 HOH C 67 367 127 HOH HOH . 
L 4 HOH C 68 368 90 HOH HOH . 
L 4 HOH C 69 369 145 HOH HOH . 
L 4 HOH C 70 370 32 HOH HOH . 
L 4 HOH C 71 371 249 HOH HOH . 
L 4 HOH C 72 372 141 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . H 3 30.369 40.557 43.051 1 55.35 ? C1 EDO 203 B 1 
HETATM 2 O O1 EDO . . . H 3 29.916 40.403 44.382 1 57.9 ? O1 EDO 203 B 1 
HETATM 3 C C2 EDO . . . H 3 31.865 40.149 42.948 1 54.27 ? C2 EDO 203 B 1 
HETATM 4 O O2 EDO . . . H 3 31.982 38.897 42.327 1 49.93 ? O2 EDO 203 B 1 
#
_model_server_stats.io_time_ms              51 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           4 
#