data_5TCO
#
_model_server_result.job_id            12ultxc7fdo_fW8tEA4lzg 
_model_server_result.datetime_utc      '2024-12-26 13:39:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tco 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":402}' 
#
_entry.id    5TCO 
#
_exptl.entry_id    5TCO 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          3 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TCO 
_cell.length_a            66.07 
_cell.length_b            69.75 
_cell.length_c            74.73 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TCO 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 152 n n 
C1 C2 BOG sing 153 n n 
C1 O5 BOG sing 154 n n 
C1 H1 BOG sing 155 n n 
O1 C1' BOG sing 156 n n 
C2 O2 BOG sing 157 n n 
C2 C3 BOG sing 158 n n 
C2 H2 BOG sing 159 n n 
O2 HO2 BOG sing 160 n n 
C3 O3 BOG sing 161 n n 
C3 C4 BOG sing 162 n n 
C3 H3 BOG sing 163 n n 
O3 HO3 BOG sing 164 n n 
C4 O4 BOG sing 165 n n 
C4 C5 BOG sing 166 n n 
C4 H4 BOG sing 167 n n 
O4 HO4 BOG sing 168 n n 
C5 O5 BOG sing 169 n n 
C5 C6 BOG sing 170 n n 
C5 H5 BOG sing 171 n n 
C6 O6 BOG sing 172 n n 
C6 H61 BOG sing 173 n n 
C6 H62 BOG sing 174 n n 
O6 HO6 BOG sing 175 n n 
C1' C2' BOG sing 176 n n 
C1' "H1'1" BOG sing 177 n n 
C1' "H1'2" BOG sing 178 n n 
C2' C3' BOG sing 179 n n 
C2' "H2'1" BOG sing 180 n n 
C2' "H2'2" BOG sing 181 n n 
C3' C4' BOG sing 182 n n 
C3' "H3'1" BOG sing 183 n n 
C3' "H3'2" BOG sing 184 n n 
C4' C5' BOG sing 185 n n 
C4' "H4'1" BOG sing 186 n n 
C4' "H4'2" BOG sing 187 n n 
C5' C6' BOG sing 188 n n 
C5' "H5'1" BOG sing 189 n n 
C5' "H5'2" BOG sing 190 n n 
C6' C7' BOG sing 191 n n 
C6' "H6'1" BOG sing 192 n n 
C6' "H6'2" BOG sing 193 n n 
C7' C8' BOG sing 194 n n 
C7' "H7'1" BOG sing 195 n n 
C7' "H7'2" BOG sing 196 n n 
C8' "H8'1" BOG sing 197 n n 
C8' "H8'2" BOG sing 198 n n 
C8' "H8'3" BOG sing 199 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     5TCO 
_atom_sites.fract_transf_matrix[1][1]    0.015135 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014337 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013382 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 79Q A 1 401 1 79Q DRG . 
C 3 BOG A 1 402 1000 BOG BOG . 
D 3 BOG A 1 403 1001 BOG BOG . 
E 4 HOH A 1 501 14 HOH HOH . 
E 4 HOH A 2 502 37 HOH HOH . 
E 4 HOH A 3 503 4 HOH HOH . 
E 4 HOH A 4 504 64 HOH HOH . 
E 4 HOH A 5 505 49 HOH HOH . 
E 4 HOH A 6 506 19 HOH HOH . 
E 4 HOH A 7 507 5 HOH HOH . 
E 4 HOH A 8 508 46 HOH HOH . 
E 4 HOH A 9 509 10 HOH HOH . 
E 4 HOH A 10 510 30 HOH HOH . 
E 4 HOH A 11 511 7 HOH HOH . 
E 4 HOH A 12 512 17 HOH HOH . 
E 4 HOH A 13 513 65 HOH HOH . 
E 4 HOH A 14 514 50 HOH HOH . 
E 4 HOH A 15 515 9 HOH HOH . 
E 4 HOH A 16 516 36 HOH HOH . 
E 4 HOH A 17 517 40 HOH HOH . 
E 4 HOH A 18 518 66 HOH HOH . 
E 4 HOH A 19 519 44 HOH HOH . 
E 4 HOH A 20 520 8 HOH HOH . 
E 4 HOH A 21 521 56 HOH HOH . 
E 4 HOH A 22 522 2 HOH HOH . 
E 4 HOH A 23 523 31 HOH HOH . 
E 4 HOH A 24 524 22 HOH HOH . 
E 4 HOH A 25 525 53 HOH HOH . 
E 4 HOH A 26 526 51 HOH HOH . 
E 4 HOH A 27 527 42 HOH HOH . 
E 4 HOH A 28 528 11 HOH HOH . 
E 4 HOH A 29 529 45 HOH HOH . 
E 4 HOH A 30 530 21 HOH HOH . 
E 4 HOH A 31 531 20 HOH HOH . 
E 4 HOH A 32 532 43 HOH HOH . 
E 4 HOH A 33 533 15 HOH HOH . 
E 4 HOH A 34 534 34 HOH HOH . 
E 4 HOH A 35 535 60 HOH HOH . 
E 4 HOH A 36 536 27 HOH HOH . 
E 4 HOH A 37 537 16 HOH HOH . 
E 4 HOH A 38 538 62 HOH HOH . 
E 4 HOH A 39 539 59 HOH HOH . 
E 4 HOH A 40 540 24 HOH HOH . 
E 4 HOH A 41 541 57 HOH HOH . 
E 4 HOH A 42 542 6 HOH HOH . 
E 4 HOH A 43 543 41 HOH HOH . 
E 4 HOH A 44 544 29 HOH HOH . 
E 4 HOH A 45 545 48 HOH HOH . 
E 4 HOH A 46 546 55 HOH HOH . 
E 4 HOH A 47 547 39 HOH HOH . 
E 4 HOH A 48 548 33 HOH HOH . 
E 4 HOH A 49 549 38 HOH HOH . 
E 4 HOH A 50 550 13 HOH HOH . 
E 4 HOH A 51 551 3 HOH HOH . 
E 4 HOH A 52 552 52 HOH HOH . 
E 4 HOH A 53 553 47 HOH HOH . 
E 4 HOH A 54 554 23 HOH HOH . 
E 4 HOH A 55 555 32 HOH HOH . 
E 4 HOH A 56 556 25 HOH HOH . 
E 4 HOH A 57 557 35 HOH HOH . 
E 4 HOH A 58 558 54 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . C 3 -5.058 -9.484 -6.773 1 24.7 ? C1 BOG 402 A 1 
HETATM 2 O O1 BOG . . . C 3 -5.469 -8.457 -7.622 1 22.32 ? O1 BOG 402 A 1 
HETATM 3 C C2 BOG . . . C 3 -5.902 -10.768 -6.867 1 24.09 ? C2 BOG 402 A 1 
HETATM 4 O O2 BOG . . . C 3 -7.26 -10.449 -6.512 1 26.62 ? O2 BOG 402 A 1 
HETATM 5 C C3 BOG . . . C 3 -5.35 -11.813 -5.918 1 24.78 ? C3 BOG 402 A 1 
HETATM 6 O O3 BOG . . . C 3 -5.919 -13.093 -6.156 1 24.31 ? O3 BOG 402 A 1 
HETATM 7 C C4 BOG . . . C 3 -3.908 -12.003 -6.266 1 23.29 ? C4 BOG 402 A 1 
HETATM 8 O O4 BOG . . . C 3 -3.429 -12.922 -5.353 1 23.79 ? O4 BOG 402 A 1 
HETATM 9 C C5 BOG . . . C 3 -3.145 -10.72 -6.172 1 24.23 ? C5 BOG 402 A 1 
HETATM 10 O O5 BOG . . . C 3 -3.702 -9.818 -7.127 1 23.96 ? O5 BOG 402 A 1 
HETATM 11 C C6 BOG . . . C 3 -1.768 -11.022 -6.746 1 24.68 ? C6 BOG 402 A 1 
HETATM 12 O O6 BOG . . . C 3 -0.961 -9.957 -6.32 1 25.84 ? O6 BOG 402 A 1 
HETATM 13 C C1' BOG . . . C 3 -4.994 -7.242 -7.091 1 24.95 ? C1' BOG 402 A 1 
HETATM 14 C C2' BOG . . . C 3 -6.191 -6.407 -6.655 1 24.16 ? C2' BOG 402 A 1 
HETATM 15 C C3' BOG . . . C 3 -5.686 -5.097 -6.186 1 28.39 ? C3' BOG 402 A 1 
HETATM 16 C C4' BOG . . . C 3 -6.835 -4.299 -5.67 1 34.22 ? C4' BOG 402 A 1 
HETATM 17 C C5' BOG . . . C 3 -6.251 -3.023 -5.112 1 39.84 ? C5' BOG 402 A 1 
HETATM 18 C C6' BOG . . . C 3 -7.264 -1.894 -5.332 1 45.36 ? C6' BOG 402 A 1 
HETATM 19 C C7' BOG . . . C 3 -7.066 -0.735 -4.34 1 44.75 ? C7' BOG 402 A 1 
HETATM 20 C C8' BOG . . . C 3 -6.709 0.586 -5.044 1 45.06 ? C8' BOG 402 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           260 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           20 
#