data_5TCV # _model_server_result.job_id wfGL4BuP_U7j8vaGZ1HBeg _model_server_result.datetime_utc '2024-12-01 03:46:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tcv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 5TCV # _exptl.entry_id 5TCV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 101.104 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1-AMINOCYCLOPROPANECARBOXYLIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TCV _cell.length_a 71.361 _cell.length_b 107.14 _cell.length_c 108.019 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TCV _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_558 -x,y,-z+3 -1 0 0 0 1 0 0 0 -1 0 0 324.057 4 'crystal symmetry operation' 4_558 x,-y,-z+3 1 0 0 0 -1 0 0 0 -1 0 0 324.057 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 177 A HIS 177 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc2 A OD1 ASP 179 A ASP 179 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.1 ? metalc ? metalc3 A NE2 HIS 234 A HIS 234 1_555 B NI NI . A NI 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? metalc ? metalc4 B NI NI . A NI 401 1_555 C O 1AC . A 1AC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.903 ? metalc ? metalc5 B NI NI . A NI 401 1_555 C N 1AC . A 1AC 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc6 B NI NI . A NI 401 1_555 D O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? # _chem_comp.formula 'C4 H7 N O2' _chem_comp.formula_weight 101.104 _chem_comp.id 1AC _chem_comp.mon_nstd_flag n _chem_comp.name '1-AMINOCYCLOPROPANECARBOXYLIC ACID' _chem_comp.type 'peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CB CG 1AC sing 1 n n CB CA 1AC sing 2 n n CB HB1 1AC sing 3 n n CB HB2 1AC sing 4 n n CG CA 1AC sing 5 n n CG HG1 1AC sing 6 n n CG HG2 1AC sing 7 n n CA C 1AC sing 8 n n CA N 1AC sing 9 n n C OXT 1AC sing 10 n n C O 1AC doub 11 n n OXT HXT 1AC sing 12 n n N H 1AC sing 13 n n N H2 1AC sing 14 n n # _atom_sites.entry_id 5TCV _atom_sites.fract_transf_matrix[1][1] 0.014013 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009334 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009258 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NI A 1 401 401 NI NI . C 3 1AC A 1 402 501 1AC 1AC . D 4 HOH A 1 601 601 HOH HOH . D 4 HOH A 2 602 604 HOH HOH . D 4 HOH A 3 603 609 HOH HOH . D 4 HOH A 4 604 602 HOH HOH . D 4 HOH A 5 605 611 HOH HOH . D 4 HOH A 6 606 605 HOH HOH . D 4 HOH A 7 607 608 HOH HOH . D 4 HOH A 8 608 610 HOH HOH . D 4 HOH A 9 609 603 HOH HOH . D 4 HOH A 10 610 606 HOH HOH . D 4 HOH A 11 611 607 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CB 1AC . . . C 3 9.791 17.066 142.042 1 70.37 ? CB 1AC 402 A 1 HETATM 2 C CG 1AC . . . C 3 10.834 16.367 142.861 1 70.48 ? CG 1AC 402 A 1 HETATM 3 C CA 1AC . . . C 3 9.683 17.05 143.537 1 69.96 ? CA 1AC 402 A 1 HETATM 4 C C 1AC . . . C 3 8.591 16.224 144.15 1 73.57 ? C 1AC 402 A 1 HETATM 5 O OXT 1AC . . . C 3 8.859 15.026 144.409 1 78.82 ? OXT 1AC 402 A 1 HETATM 6 O O 1AC . . . C 3 7.51 16.821 144.389 1 69.05 ? O 1AC 402 A 1 HETATM 7 N N 1AC . . . C 3 9.879 18.315 144.249 1 62.62 ? N 1AC 402 A 1 # _model_server_stats.io_time_ms 55 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 20 _model_server_stats.element_count 7 #