data_5TDC
#
_model_server_result.job_id            z6wQXPSBST4wBfIt4UTu9A 
_model_server_result.datetime_utc      '2025-07-30 23:16:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tdc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":204}' 
#
_entry.id    5TDC 
#
_exptl.entry_id    5TDC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              96.063 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SULFATE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TDC 
_cell.length_a            47.274 
_cell.length_b            49.036 
_cell.length_c            53.634 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TDC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,G,H,M,O 1 1 
B,D,I,J,K,L,N,P 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 H N N 
? 4 L N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 C C NMM 1 B NMM 1 1_555 C N ILE 2 B ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? 
covale ? covale2 D C NMM 1 D NMM 1 1_555 D N ILE 2 D ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? 
metalc ? metalc1 A SG CYS 7 A CYS 99 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? 
metalc ? metalc2 A SG CYS 20 A CYS 112 1_555 G ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc3 A SG CYS 23 A CYS 115 1_555 G ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? 
metalc ? metalc4 A SG CYS 32 A CYS 124 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? 
metalc ? metalc5 A SG CYS 35 A CYS 127 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.48 ? 
metalc ? metalc6 A SG CYS 35 A CYS 127 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? 
metalc ? metalc7 A ND1 HIS 41 A HIS 133 1_555 G ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
metalc ? metalc8 A ND1 HIS 44 A HIS 136 1_555 G ZN ZN . A ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? 
metalc ? metalc9 A SG CYS 57 A CYS 149 1_555 E ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? 
metalc ? metalc10 A SG CYS 59 A CYS 151 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.267 ? 
metalc ? metalc11 A SG CYS 71 A CYS 163 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc12 A ND1 HIS 74 A HIS 166 1_555 F ZN ZN . A ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.063 ? 
metalc ? metalc13 B SG CYS 7 C CYS 99 1_555 I ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? 
metalc ? metalc14 B SG CYS 20 C CYS 112 1_555 K ZN ZN . C ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc15 B SG CYS 23 C CYS 115 1_555 K ZN ZN . C ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? 
metalc ? metalc16 B SG CYS 32 C CYS 124 1_555 I ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? 
metalc ? metalc17 B SG CYS 35 C CYS 127 1_555 I ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.355 ? 
metalc ? metalc18 B SG CYS 35 C CYS 127 1_555 J ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? 
metalc ? metalc19 B ND1 HIS 41 C HIS 133 1_555 K ZN ZN . C ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
metalc ? metalc20 B ND1 HIS 44 C HIS 136 1_555 K ZN ZN . C ZN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
metalc ? metalc21 B SG CYS 57 C CYS 149 1_555 I ZN ZN . C ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc22 B SG CYS 59 C CYS 151 1_555 J ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.289 ? 
metalc ? metalc23 B SG CYS 71 C CYS 163 1_555 J ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.293 ? 
metalc ? metalc24 B ND1 HIS 74 C HIS 166 1_555 J ZN ZN . C ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
#
_chem_comp.formula           'O4 S -2' 
_chem_comp.formula_weight    96.063 
_chem_comp.id                SO4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SULFATE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O1 SO4 doub 318 n n 
S O2 SO4 doub 319 n n 
S O3 SO4 sing 320 n n 
S O4 SO4 sing 321 n n 
#
_atom_sites.entry_id                     5TDC 
_atom_sites.fract_transf_matrix[1][1]    0.021153 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020393 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018645 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 ZN A 1 201 1 ZN ZN . 
F 3 ZN A 1 202 2 ZN ZN . 
G 3 ZN A 1 203 3 ZN ZN . 
H 4 SO4 A 1 204 2 SO4 SO4 . 
I 3 ZN C 1 201 4 ZN ZN . 
J 3 ZN C 1 202 5 ZN ZN . 
K 3 ZN C 1 203 6 ZN ZN . 
L 4 SO4 C 1 204 1 SO4 SO4 . 
M 5 HOH A 1 301 122 HOH HOH . 
M 5 HOH A 2 302 54 HOH HOH . 
M 5 HOH A 3 303 55 HOH HOH . 
M 5 HOH A 4 304 34 HOH HOH . 
M 5 HOH A 5 305 11 HOH HOH . 
M 5 HOH A 6 306 77 HOH HOH . 
M 5 HOH A 7 307 75 HOH HOH . 
M 5 HOH A 8 308 56 HOH HOH . 
M 5 HOH A 9 309 8 HOH HOH . 
M 5 HOH A 10 310 60 HOH HOH . 
M 5 HOH A 11 311 2 HOH HOH . 
M 5 HOH A 12 312 26 HOH HOH . 
M 5 HOH A 13 313 25 HOH HOH . 
M 5 HOH A 14 314 38 HOH HOH . 
M 5 HOH A 15 315 37 HOH HOH . 
M 5 HOH A 16 316 52 HOH HOH . 
M 5 HOH A 17 317 18 HOH HOH . 
M 5 HOH A 18 318 44 HOH HOH . 
M 5 HOH A 19 319 71 HOH HOH . 
M 5 HOH A 20 320 67 HOH HOH . 
M 5 HOH A 21 321 116 HOH HOH . 
M 5 HOH A 22 322 45 HOH HOH . 
M 5 HOH A 23 323 46 HOH HOH . 
M 5 HOH A 24 324 57 HOH HOH . 
M 5 HOH A 25 325 40 HOH HOH . 
M 5 HOH A 26 326 32 HOH HOH . 
M 5 HOH A 27 327 28 HOH HOH . 
M 5 HOH A 28 328 9 HOH HOH . 
M 5 HOH A 29 329 27 HOH HOH . 
M 5 HOH A 30 330 82 HOH HOH . 
M 5 HOH A 31 331 31 HOH HOH . 
M 5 HOH A 32 332 121 HOH HOH . 
M 5 HOH A 33 333 1 HOH HOH . 
M 5 HOH A 34 334 64 HOH HOH . 
M 5 HOH A 35 335 36 HOH HOH . 
M 5 HOH A 36 336 68 HOH HOH . 
N 5 HOH C 1 301 73 HOH HOH . 
N 5 HOH C 2 302 21 HOH HOH . 
N 5 HOH C 3 303 86 HOH HOH . 
N 5 HOH C 4 304 58 HOH HOH . 
N 5 HOH C 5 305 5 HOH HOH . 
N 5 HOH C 6 306 49 HOH HOH . 
N 5 HOH C 7 307 3 HOH HOH . 
N 5 HOH C 8 308 13 HOH HOH . 
N 5 HOH C 9 309 4 HOH HOH . 
N 5 HOH C 10 310 7 HOH HOH . 
N 5 HOH C 11 311 63 HOH HOH . 
N 5 HOH C 12 312 53 HOH HOH . 
N 5 HOH C 13 313 35 HOH HOH . 
N 5 HOH C 14 314 42 HOH HOH . 
N 5 HOH C 15 315 10 HOH HOH . 
N 5 HOH C 16 316 22 HOH HOH . 
N 5 HOH C 17 317 17 HOH HOH . 
N 5 HOH C 18 318 66 HOH HOH . 
N 5 HOH C 19 319 70 HOH HOH . 
N 5 HOH C 20 320 24 HOH HOH . 
N 5 HOH C 21 321 47 HOH HOH . 
N 5 HOH C 22 322 41 HOH HOH . 
N 5 HOH C 23 323 19 HOH HOH . 
N 5 HOH C 24 324 16 HOH HOH . 
N 5 HOH C 25 325 65 HOH HOH . 
N 5 HOH C 26 326 6 HOH HOH . 
N 5 HOH C 27 327 120 HOH HOH . 
N 5 HOH C 28 328 20 HOH HOH . 
N 5 HOH C 29 329 48 HOH HOH . 
O 5 HOH B 1 101 80 HOH HOH . 
O 5 HOH B 2 102 59 HOH HOH . 
O 5 HOH B 3 103 123 HOH HOH . 
P 5 HOH D 1 101 39 HOH HOH . 
P 5 HOH D 2 102 12 HOH HOH . 
P 5 HOH D 3 103 62 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S SO4 . . . H 4 14.567 5.602 16.446 1 17.7 ? S SO4 204 A 1 
HETATM 2 O O1 SO4 . . . H 4 15.5 4.775 15.676 1 17.63 ? O1 SO4 204 A 1 
HETATM 3 O O2 SO4 . . . H 4 13.326 5.819 15.703 1 17.39 ? O2 SO4 204 A 1 
HETATM 4 O O3 SO4 . . . H 4 14.293 4.965 17.744 1 17.26 ? O3 SO4 204 A 1 
HETATM 5 O O4 SO4 . . . H 4 15.257 6.863 16.699 1 17.38 ? O4 SO4 204 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           5 
#