data_5TEK # _model_server_result.job_id kacGyvtmud3FLkDvo3jUYA _model_server_result.datetime_utc '2024-12-05 02:55:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tek # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":304}' # _entry.id 5TEK # _exptl.entry_id 5TEK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TEK _cell.length_a 60.569 _cell.length_b 122.607 _cell.length_c 80.846 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TEK _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O VAL 25 A VAL 21 1_555 D NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.827 ? metalc ? metalc2 A O ALA 26 A ALA 22 1_555 D NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.757 ? metalc ? metalc3 A O ALA 28 A ALA 24 1_555 D NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc4 A O LEU 31 A LEU 27 1_555 D NA NA . A NA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc5 D NA NA . A NA 302 1_555 J O HOH . A HOH 444 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.042 ? metalc ? metalc6 B O VAL 25 B VAL 21 1_555 I NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.768 ? metalc ? metalc7 B O ALA 26 B ALA 22 1_555 I NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.734 ? metalc ? metalc8 B O ALA 28 B ALA 24 1_555 I NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc9 B O LEU 31 B LEU 27 1_555 I NA NA . B NA 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? metalc ? metalc10 I NA NA . B NA 305 1_555 K O HOH . B HOH 486 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 224 n n O1 HO1 PG4 sing 225 n n C1 C2 PG4 sing 226 n n C1 H11 PG4 sing 227 n n C1 H12 PG4 sing 228 n n C2 O2 PG4 sing 229 n n C2 H21 PG4 sing 230 n n C2 H22 PG4 sing 231 n n O2 C3 PG4 sing 232 n n C3 C4 PG4 sing 233 n n C3 H31 PG4 sing 234 n n C3 H32 PG4 sing 235 n n C4 O3 PG4 sing 236 n n C4 H41 PG4 sing 237 n n C4 H42 PG4 sing 238 n n O3 C5 PG4 sing 239 n n C5 C6 PG4 sing 240 n n C5 H51 PG4 sing 241 n n C5 H52 PG4 sing 242 n n C6 O4 PG4 sing 243 n n C6 H61 PG4 sing 244 n n C6 H62 PG4 sing 245 n n O4 C7 PG4 sing 246 n n C7 C8 PG4 sing 247 n n C7 H71 PG4 sing 248 n n C7 H72 PG4 sing 249 n n C8 O5 PG4 sing 250 n n C8 H81 PG4 sing 251 n n C8 H82 PG4 sing 252 n n O5 HO5 PG4 sing 253 n n # _atom_sites.entry_id 5TEK _atom_sites.fract_transf_matrix[1][1] 0.01651 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012369 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 301 1 CL CL . D 3 NA A 1 302 2 NA NA . E 2 CL B 1 301 1 CL CL . F 2 CL B 1 302 1 CL CL . G 4 PG4 B 1 303 1 PG4 PG4 . H 4 PG4 B 1 304 2 PG4 PG4 . I 3 NA B 1 305 1 NA NA . J 5 HOH A 1 401 149 HOH HOH . J 5 HOH A 2 402 74 HOH HOH . J 5 HOH A 3 403 14 HOH HOH . J 5 HOH A 4 404 20 HOH HOH . J 5 HOH A 5 405 98 HOH HOH . J 5 HOH A 6 406 5 HOH HOH . J 5 HOH A 7 407 131 HOH HOH . J 5 HOH A 8 408 152 HOH HOH . J 5 HOH A 9 409 94 HOH HOH . J 5 HOH A 10 410 63 HOH HOH . J 5 HOH A 11 411 18 HOH HOH . J 5 HOH A 12 412 157 HOH HOH . J 5 HOH A 13 413 130 HOH HOH . J 5 HOH A 14 414 116 HOH HOH . J 5 HOH A 15 415 128 HOH HOH . J 5 HOH A 16 416 158 HOH HOH . J 5 HOH A 17 417 52 HOH HOH . J 5 HOH A 18 418 16 HOH HOH . J 5 HOH A 19 419 147 HOH HOH . J 5 HOH A 20 420 71 HOH HOH . J 5 HOH A 21 421 61 HOH HOH . J 5 HOH A 22 422 135 HOH HOH . J 5 HOH A 23 423 3 HOH HOH . J 5 HOH A 24 424 155 HOH HOH . J 5 HOH A 25 425 132 HOH HOH . J 5 HOH A 26 426 66 HOH HOH . J 5 HOH A 27 427 2 HOH HOH . J 5 HOH A 28 428 129 HOH HOH . J 5 HOH A 29 429 133 HOH HOH . J 5 HOH A 30 430 62 HOH HOH . J 5 HOH A 31 431 64 HOH HOH . J 5 HOH A 32 432 153 HOH HOH . J 5 HOH A 33 433 134 HOH HOH . J 5 HOH A 34 434 93 HOH HOH . J 5 HOH A 35 435 59 HOH HOH . J 5 HOH A 36 436 17 HOH HOH . J 5 HOH A 37 437 68 HOH HOH . J 5 HOH A 38 438 73 HOH HOH . J 5 HOH A 39 439 11 HOH HOH . J 5 HOH A 40 440 148 HOH HOH . J 5 HOH A 41 441 96 HOH HOH . J 5 HOH A 42 442 8 HOH HOH . J 5 HOH A 43 443 15 HOH HOH . J 5 HOH A 44 444 56 HOH HOH . J 5 HOH A 45 445 4 HOH HOH . J 5 HOH A 46 446 150 HOH HOH . J 5 HOH A 47 447 95 HOH HOH . J 5 HOH A 48 448 13 HOH HOH . J 5 HOH A 49 449 6 HOH HOH . J 5 HOH A 50 450 58 HOH HOH . J 5 HOH A 51 451 175 HOH HOH . J 5 HOH A 52 452 57 HOH HOH . J 5 HOH A 53 453 97 HOH HOH . J 5 HOH A 54 454 176 HOH HOH . J 5 HOH A 55 455 117 HOH HOH . J 5 HOH A 56 456 127 HOH HOH . J 5 HOH A 57 457 151 HOH HOH . K 5 HOH B 1 401 85 HOH HOH . K 5 HOH B 2 402 88 HOH HOH . K 5 HOH B 3 403 89 HOH HOH . K 5 HOH B 4 404 181 HOH HOH . K 5 HOH B 5 405 39 HOH HOH . K 5 HOH B 6 406 31 HOH HOH . K 5 HOH B 7 407 41 HOH HOH . K 5 HOH B 8 408 2 HOH HOH . K 5 HOH B 9 409 35 HOH HOH . K 5 HOH B 10 410 168 HOH HOH . K 5 HOH B 11 411 40 HOH HOH . K 5 HOH B 12 412 24 HOH HOH . K 5 HOH B 13 413 10 HOH HOH . K 5 HOH B 14 414 102 HOH HOH . K 5 HOH B 15 415 12 HOH HOH . K 5 HOH B 16 416 140 HOH HOH . K 5 HOH B 17 417 163 HOH HOH . K 5 HOH B 18 418 32 HOH HOH . K 5 HOH B 19 419 49 HOH HOH . K 5 HOH B 20 420 44 HOH HOH . K 5 HOH B 21 421 23 HOH HOH . K 5 HOH B 22 422 166 HOH HOH . K 5 HOH B 23 423 26 HOH HOH . K 5 HOH B 24 424 19 HOH HOH . K 5 HOH B 25 425 139 HOH HOH . K 5 HOH B 26 426 143 HOH HOH . K 5 HOH B 27 427 183 HOH HOH . K 5 HOH B 28 428 21 HOH HOH . K 5 HOH B 29 429 75 HOH HOH . K 5 HOH B 30 430 167 HOH HOH . K 5 HOH B 31 431 182 HOH HOH . K 5 HOH B 32 432 48 HOH HOH . K 5 HOH B 33 433 34 HOH HOH . K 5 HOH B 34 434 22 HOH HOH . K 5 HOH B 35 435 142 HOH HOH . K 5 HOH B 36 436 29 HOH HOH . K 5 HOH B 37 437 121 HOH HOH . K 5 HOH B 38 438 138 HOH HOH . K 5 HOH B 39 439 144 HOH HOH . K 5 HOH B 40 440 38 HOH HOH . K 5 HOH B 41 441 84 HOH HOH . K 5 HOH B 42 442 33 HOH HOH . K 5 HOH B 43 443 87 HOH HOH . K 5 HOH B 44 444 46 HOH HOH . K 5 HOH B 45 445 179 HOH HOH . K 5 HOH B 46 446 180 HOH HOH . K 5 HOH B 47 447 45 HOH HOH . K 5 HOH B 48 448 69 HOH HOH . K 5 HOH B 49 449 30 HOH HOH . K 5 HOH B 50 450 47 HOH HOH . K 5 HOH B 51 451 169 HOH HOH . K 5 HOH B 52 452 177 HOH HOH . K 5 HOH B 53 453 160 HOH HOH . K 5 HOH B 54 454 92 HOH HOH . K 5 HOH B 55 455 86 HOH HOH . K 5 HOH B 56 456 136 HOH HOH . K 5 HOH B 57 457 172 HOH HOH . K 5 HOH B 58 458 123 HOH HOH . K 5 HOH B 59 459 170 HOH HOH . K 5 HOH B 60 460 81 HOH HOH . K 5 HOH B 61 461 100 HOH HOH . K 5 HOH B 62 462 106 HOH HOH . K 5 HOH B 63 463 83 HOH HOH . K 5 HOH B 64 464 51 HOH HOH . K 5 HOH B 65 465 111 HOH HOH . K 5 HOH B 66 466 42 HOH HOH . K 5 HOH B 67 467 43 HOH HOH . K 5 HOH B 68 468 37 HOH HOH . K 5 HOH B 69 469 36 HOH HOH . K 5 HOH B 70 470 25 HOH HOH . K 5 HOH B 71 471 118 HOH HOH . K 5 HOH B 72 472 173 HOH HOH . K 5 HOH B 73 473 164 HOH HOH . K 5 HOH B 74 474 107 HOH HOH . K 5 HOH B 75 475 76 HOH HOH . K 5 HOH B 76 476 108 HOH HOH . K 5 HOH B 77 477 28 HOH HOH . K 5 HOH B 78 478 27 HOH HOH . K 5 HOH B 79 479 109 HOH HOH . K 5 HOH B 80 480 146 HOH HOH . K 5 HOH B 81 481 114 HOH HOH . K 5 HOH B 82 482 154 HOH HOH . K 5 HOH B 83 483 137 HOH HOH . K 5 HOH B 84 484 82 HOH HOH . K 5 HOH B 85 485 78 HOH HOH . K 5 HOH B 86 486 141 HOH HOH . K 5 HOH B 87 487 178 HOH HOH . K 5 HOH B 88 488 112 HOH HOH . K 5 HOH B 89 489 165 HOH HOH . K 5 HOH B 90 490 171 HOH HOH . K 5 HOH B 91 491 126 HOH HOH . K 5 HOH B 92 492 105 HOH HOH . K 5 HOH B 93 493 79 HOH HOH . K 5 HOH B 94 494 110 HOH HOH . K 5 HOH B 95 495 50 HOH HOH . K 5 HOH B 96 496 90 HOH HOH . K 5 HOH B 97 497 161 HOH HOH . K 5 HOH B 98 498 145 HOH HOH . K 5 HOH B 99 499 162 HOH HOH . K 5 HOH B 100 500 53 HOH HOH . K 5 HOH B 101 501 119 HOH HOH . K 5 HOH B 102 502 174 HOH HOH . K 5 HOH B 103 503 115 HOH HOH . K 5 HOH B 104 504 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C3 PG4 . . . H 4 0.866 0.848 -12.951 1 60.15 ? C3 PG4 304 B 1 HETATM 2 C C4 PG4 . . . H 4 1.358 2.276 -13.106 1 65.55 ? C4 PG4 304 B 1 HETATM 3 O O3 PG4 . . . H 4 2.043 2.497 -14.356 1 70.11 ? O3 PG4 304 B 1 HETATM 4 C C5 PG4 . . . H 4 1.429 3.394 -15.296 1 74.35 ? C5 PG4 304 B 1 HETATM 5 C C6 PG4 . . . H 4 1.551 2.878 -16.732 1 74.95 ? C6 PG4 304 B 1 HETATM 6 O O4 PG4 . . . H 4 2.878 3.132 -17.189 1 77.13 ? O4 PG4 304 B 1 HETATM 7 C C7 PG4 . . . H 4 3.033 3.192 -18.605 1 76.49 ? C7 PG4 304 B 1 HETATM 8 C C8 PG4 . . . H 4 4.534 3.156 -18.927 1 76.47 ? C8 PG4 304 B 1 HETATM 9 O O5 PG4 . . . H 4 4.909 2.481 -20.145 1 74.95 ? O5 PG4 304 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #