data_5TEL # _model_server_result.job_id vsbj5S-qmXZHrI-aHtEbFA _model_server_result.datetime_utc '2024-11-26 05:34:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tel # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":401}' # _entry.id 5TEL # _exptl.entry_id 5TEL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 5TEL _cell.length_a 97.474 _cell.length_b 97.474 _cell.length_c 80.788 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TEL _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id NH1 _struct_conn.ptnr1_label_comp_id ARG _struct_conn.ptnr1_label_seq_id 189 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ARG _struct_conn.ptnr1_auth_seq_id 221 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id CB _struct_conn.ptnr2_label_comp_id SER _struct_conn.ptnr2_label_seq_id 190 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id SER _struct_conn.ptnr2_auth_seq_id 222 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.476 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 237 n y N1 C5 IMD sing 238 n y N1 HN1 IMD sing 239 n n C2 N3 IMD doub 240 n y C2 H2 IMD sing 241 n n N3 C4 IMD sing 242 n y N3 HN3 IMD sing 243 n n C4 C5 IMD doub 244 n y C4 H4 IMD sing 245 n n C5 H5 IMD sing 246 n n # _atom_sites.entry_id 5TEL _atom_sites.fract_transf_matrix[1][1] 0.010259 _atom_sites.fract_transf_matrix[1][2] 0.005923 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011846 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012378 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 401 500 IMD IMD . C 3 7AJ A 1 402 1 7AJ INH . D 4 HOH A 1 501 105 HOH HOH . D 4 HOH A 2 502 126 HOH HOH . D 4 HOH A 3 503 153 HOH HOH . D 4 HOH A 4 504 45 HOH HOH . D 4 HOH A 5 505 71 HOH HOH . D 4 HOH A 6 506 8 HOH HOH . D 4 HOH A 7 507 100 HOH HOH . D 4 HOH A 8 508 36 HOH HOH . D 4 HOH A 9 509 14 HOH HOH . D 4 HOH A 10 510 108 HOH HOH . D 4 HOH A 11 511 50 HOH HOH . D 4 HOH A 12 512 69 HOH HOH . D 4 HOH A 13 513 137 HOH HOH . D 4 HOH A 14 514 102 HOH HOH . D 4 HOH A 15 515 17 HOH HOH . D 4 HOH A 16 516 127 HOH HOH . D 4 HOH A 17 517 6 HOH HOH . D 4 HOH A 18 518 29 HOH HOH . D 4 HOH A 19 519 88 HOH HOH . D 4 HOH A 20 520 37 HOH HOH . D 4 HOH A 21 521 125 HOH HOH . D 4 HOH A 22 522 66 HOH HOH . D 4 HOH A 23 523 130 HOH HOH . D 4 HOH A 24 524 48 HOH HOH . D 4 HOH A 25 525 73 HOH HOH . D 4 HOH A 26 526 98 HOH HOH . D 4 HOH A 27 527 122 HOH HOH . D 4 HOH A 28 528 61 HOH HOH . D 4 HOH A 29 529 3 HOH HOH . D 4 HOH A 30 530 30 HOH HOH . D 4 HOH A 31 531 27 HOH HOH . D 4 HOH A 32 532 33 HOH HOH . D 4 HOH A 33 533 97 HOH HOH . D 4 HOH A 34 534 86 HOH HOH . D 4 HOH A 35 535 10 HOH HOH . D 4 HOH A 36 536 9 HOH HOH . D 4 HOH A 37 537 41 HOH HOH . D 4 HOH A 38 538 5 HOH HOH . D 4 HOH A 39 539 1 HOH HOH . D 4 HOH A 40 540 145 HOH HOH . D 4 HOH A 41 541 23 HOH HOH . D 4 HOH A 42 542 92 HOH HOH . D 4 HOH A 43 543 113 HOH HOH . D 4 HOH A 44 544 78 HOH HOH . D 4 HOH A 45 545 101 HOH HOH . D 4 HOH A 46 546 64 HOH HOH . D 4 HOH A 47 547 19 HOH HOH . D 4 HOH A 48 548 46 HOH HOH . D 4 HOH A 49 549 119 HOH HOH . D 4 HOH A 50 550 65 HOH HOH . D 4 HOH A 51 551 85 HOH HOH . D 4 HOH A 52 552 87 HOH HOH . D 4 HOH A 53 553 25 HOH HOH . D 4 HOH A 54 554 154 HOH HOH . D 4 HOH A 55 555 139 HOH HOH . D 4 HOH A 56 556 115 HOH HOH . D 4 HOH A 57 557 76 HOH HOH . D 4 HOH A 58 558 148 HOH HOH . D 4 HOH A 59 559 151 HOH HOH . D 4 HOH A 60 560 12 HOH HOH . D 4 HOH A 61 561 81 HOH HOH . D 4 HOH A 62 562 70 HOH HOH . D 4 HOH A 63 563 55 HOH HOH . D 4 HOH A 64 564 93 HOH HOH . D 4 HOH A 65 565 40 HOH HOH . D 4 HOH A 66 566 15 HOH HOH . D 4 HOH A 67 567 32 HOH HOH . D 4 HOH A 68 568 116 HOH HOH . D 4 HOH A 69 569 77 HOH HOH . D 4 HOH A 70 570 79 HOH HOH . D 4 HOH A 71 571 149 HOH HOH . D 4 HOH A 72 572 4 HOH HOH . D 4 HOH A 73 573 53 HOH HOH . D 4 HOH A 74 574 94 HOH HOH . D 4 HOH A 75 575 129 HOH HOH . D 4 HOH A 76 576 63 HOH HOH . D 4 HOH A 77 577 44 HOH HOH . D 4 HOH A 78 578 7 HOH HOH . D 4 HOH A 79 579 143 HOH HOH . D 4 HOH A 80 580 95 HOH HOH . D 4 HOH A 81 581 26 HOH HOH . D 4 HOH A 82 582 39 HOH HOH . D 4 HOH A 83 583 34 HOH HOH . D 4 HOH A 84 584 110 HOH HOH . D 4 HOH A 85 585 35 HOH HOH . D 4 HOH A 86 586 42 HOH HOH . D 4 HOH A 87 587 112 HOH HOH . D 4 HOH A 88 588 121 HOH HOH . D 4 HOH A 89 589 2 HOH HOH . D 4 HOH A 90 590 59 HOH HOH . D 4 HOH A 91 591 89 HOH HOH . D 4 HOH A 92 592 150 HOH HOH . D 4 HOH A 93 593 144 HOH HOH . D 4 HOH A 94 594 24 HOH HOH . D 4 HOH A 95 595 74 HOH HOH . D 4 HOH A 96 596 11 HOH HOH . D 4 HOH A 97 597 123 HOH HOH . D 4 HOH A 98 598 132 HOH HOH . D 4 HOH A 99 599 51 HOH HOH . D 4 HOH A 100 600 54 HOH HOH . D 4 HOH A 101 601 20 HOH HOH . D 4 HOH A 102 602 68 HOH HOH . D 4 HOH A 103 603 75 HOH HOH . D 4 HOH A 104 604 106 HOH HOH . D 4 HOH A 105 605 84 HOH HOH . D 4 HOH A 106 606 103 HOH HOH . D 4 HOH A 107 607 49 HOH HOH . D 4 HOH A 108 608 155 HOH HOH . D 4 HOH A 109 609 62 HOH HOH . D 4 HOH A 110 610 83 HOH HOH . D 4 HOH A 111 611 114 HOH HOH . D 4 HOH A 112 612 96 HOH HOH . D 4 HOH A 113 613 147 HOH HOH . D 4 HOH A 114 614 80 HOH HOH . D 4 HOH A 115 615 99 HOH HOH . D 4 HOH A 116 616 120 HOH HOH . D 4 HOH A 117 617 140 HOH HOH . D 4 HOH A 118 618 57 HOH HOH . D 4 HOH A 119 619 43 HOH HOH . D 4 HOH A 120 620 136 HOH HOH . D 4 HOH A 121 621 104 HOH HOH . D 4 HOH A 122 622 58 HOH HOH . D 4 HOH A 123 623 67 HOH HOH . D 4 HOH A 124 624 38 HOH HOH . D 4 HOH A 125 625 28 HOH HOH . D 4 HOH A 126 626 56 HOH HOH . D 4 HOH A 127 627 21 HOH HOH . D 4 HOH A 128 628 107 HOH HOH . D 4 HOH A 129 629 142 HOH HOH . D 4 HOH A 130 630 118 HOH HOH . D 4 HOH A 131 631 13 HOH HOH . D 4 HOH A 132 632 52 HOH HOH . D 4 HOH A 133 633 90 HOH HOH . D 4 HOH A 134 634 47 HOH HOH . D 4 HOH A 135 635 18 HOH HOH . D 4 HOH A 136 636 138 HOH HOH . D 4 HOH A 137 637 134 HOH HOH . D 4 HOH A 138 638 16 HOH HOH . D 4 HOH A 139 639 135 HOH HOH . D 4 HOH A 140 640 141 HOH HOH . D 4 HOH A 141 641 22 HOH HOH . D 4 HOH A 142 642 128 HOH HOH . D 4 HOH A 143 643 72 HOH HOH . D 4 HOH A 144 644 131 HOH HOH . D 4 HOH A 145 645 158 HOH HOH . D 4 HOH A 146 646 82 HOH HOH . D 4 HOH A 147 647 146 HOH HOH . D 4 HOH A 148 648 91 HOH HOH . D 4 HOH A 149 649 60 HOH HOH . D 4 HOH A 150 650 156 HOH HOH . D 4 HOH A 151 651 157 HOH HOH . D 4 HOH A 152 652 109 HOH HOH . D 4 HOH A 153 653 124 HOH HOH . D 4 HOH A 154 654 31 HOH HOH . D 4 HOH A 155 655 133 HOH HOH . D 4 HOH A 156 656 117 HOH HOH . D 4 HOH A 157 657 152 HOH HOH . D 4 HOH A 158 658 159 HOH HOH . D 4 HOH A 159 659 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . B 2 -31.951 -29.253 -19.444 1 50.5 ? N1 IMD 401 A 1 HETATM 2 C C2 IMD . . . B 2 -31.31 -30.286 -19.985 1 47.27 ? C2 IMD 401 A 1 HETATM 3 N N3 IMD . . . B 2 -31.377 -30.163 -21.309 1 53.8 ? N3 IMD 401 A 1 HETATM 4 C C4 IMD . . . B 2 -32.057 -29.053 -21.587 1 51.24 ? C4 IMD 401 A 1 HETATM 5 C C5 IMD . . . B 2 -32.412 -28.491 -20.434 1 53.56 ? C5 IMD 401 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 281 _model_server_stats.encode_time_ms 12 _model_server_stats.element_count 5 #