data_5TF9 # _model_server_result.job_id sZ7rKQ9pajq3g8sEnhSenw _model_server_result.datetime_utc '2024-11-04 20:13:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tf9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":501}' # _entry.id 5TF9 # _exptl.entry_id 5TF9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 475.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description {2-[(4-chlorophenyl)methoxy]phenyl}{5-[2-(methylamino)-1,3-thiazol-4-yl]-2,3-dihydro-1H-indol-1-yl}methanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.5 _cell.angle_gamma 90 _cell.entry_id 5TF9 _cell.length_a 83.065 _cell.length_b 104.482 _cell.length_c 69.604 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TF9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 150 A ASN 354 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.495 ? metalc ? metalc2 A OD2 ASP 164 A ASP 368 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.457 ? metalc ? metalc3 A O SER 219 A SER 423 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.764 ? metalc ? metalc4 A O CYS 221 A CYS 425 1_555 F CA CA . A CA 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.842 ? metalc ? metalc5 D O1A ANP . A ANP 502 1_555 E MN MN . A MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.213 ? metalc ? metalc6 F CA CA . A CA 504 1_555 J O HOH . A HOH 637 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.851 ? metalc ? metalc7 F CA CA . A CA 504 1_555 K O HOH . B HOH 638 2_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc8 B OD1 ASN 150 B ASN 354 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc9 B OD2 ASP 164 B ASP 368 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.26 ? metalc ? metalc10 H O2A ANP . B ANP 502 1_555 I MN MN . B MN 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.715 ? metalc ? metalc11 I MN MN . B MN 503 1_555 K O HOH . B HOH 646 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? # _chem_comp.formula 'C26 H22 Cl N3 O2 S' _chem_comp.formula_weight 475.99 _chem_comp.id 7AV _chem_comp.mon_nstd_flag . _chem_comp.name {2-[(4-chlorophenyl)methoxy]phenyl}{5-[2-(methylamino)-1,3-thiazol-4-yl]-2,3-dihydro-1H-indol-1-yl}methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C24 N23 7AV sing 1 n n N23 C21 7AV sing 2 n n C21 S20 7AV sing 3 n y C21 N22 7AV doub 4 n y S20 C19 7AV sing 5 n y N22 C18 7AV sing 6 n y CL3 C30 7AV sing 7 n n C19 C18 7AV doub 8 n y C18 C2 7AV sing 9 n n C30 C31 7AV doub 10 n y C30 C29 7AV sing 11 n y C31 C32 7AV sing 12 n y C2 C3 7AV doub 13 n y C2 C1 7AV sing 14 n y C3 C4 7AV sing 15 n y C29 C28 7AV doub 16 n y C1 C5 7AV doub 17 n y C32 C27 7AV doub 18 n y C4 C6 7AV doub 19 n y C28 C27 7AV sing 20 n y C27 C26 7AV sing 21 n n C15 C16 7AV doub 22 n y C15 C14 7AV sing 23 n y C5 C6 7AV sing 24 n y C5 C9 7AV sing 25 n n C6 N7 7AV sing 26 n n C16 C17 7AV sing 27 n y C14 C13 7AV doub 28 n y C17 O25 7AV sing 29 n n C17 C12 7AV doub 30 n y C13 C12 7AV sing 31 n y C26 O25 7AV sing 32 n n C12 C10 7AV sing 33 n n C9 C8 7AV sing 34 n n N7 C10 7AV sing 35 n n N7 C8 7AV sing 36 n n C10 O11 7AV doub 37 n n C1 H1 7AV sing 38 n n C3 H2 7AV sing 39 n n C13 H3 7AV sing 40 n n C14 H4 7AV sing 41 n n C15 H5 7AV sing 42 n n C16 H6 7AV sing 43 n n C19 H7 7AV sing 44 n n C24 H8 7AV sing 45 n n C24 H9 7AV sing 46 n n C24 H10 7AV sing 47 n n C26 H11 7AV sing 48 n n C26 H12 7AV sing 49 n n C28 H13 7AV sing 50 n n C29 H14 7AV sing 51 n n C4 H15 7AV sing 52 n n C8 H16 7AV sing 53 n n C8 H17 7AV sing 54 n n C9 H18 7AV sing 55 n n C9 H19 7AV sing 56 n n N23 H20 7AV sing 57 n n C31 H21 7AV sing 58 n n C32 H22 7AV sing 59 n n # _atom_sites.entry_id 5TF9 _atom_sites.fract_transf_matrix[1][1] 0.012039 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006003 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009571 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 7AV A 1 501 1 7AV LI1 . D 3 ANP A 1 502 2 ANP ANP . E 4 MN A 1 503 1 MN MN . F 5 CA A 1 504 3 CA CA . G 2 7AV B 1 501 1 7AV LI1 . H 3 ANP B 1 502 2 ANP ANP . I 4 MN B 1 503 2 MN MN . J 6 HOH A 1 601 85 HOH HOH . J 6 HOH A 2 602 1 HOH HOH . J 6 HOH A 3 603 57 HOH HOH . J 6 HOH A 4 604 53 HOH HOH . J 6 HOH A 5 605 66 HOH HOH . J 6 HOH A 6 606 44 HOH HOH . J 6 HOH A 7 607 50 HOH HOH . J 6 HOH A 8 608 76 HOH HOH . J 6 HOH A 9 609 3 HOH HOH . J 6 HOH A 10 610 47 HOH HOH . J 6 HOH A 11 611 82 HOH HOH . J 6 HOH A 12 612 79 HOH HOH . J 6 HOH A 13 613 58 HOH HOH . J 6 HOH A 14 614 59 HOH HOH . J 6 HOH A 15 615 81 HOH HOH . J 6 HOH A 16 616 68 HOH HOH . J 6 HOH A 17 617 52 HOH HOH . J 6 HOH A 18 618 70 HOH HOH . J 6 HOH A 19 619 45 HOH HOH . J 6 HOH A 20 620 48 HOH HOH . J 6 HOH A 21 621 43 HOH HOH . J 6 HOH A 22 622 69 HOH HOH . J 6 HOH A 23 623 46 HOH HOH . J 6 HOH A 24 624 49 HOH HOH . J 6 HOH A 25 625 60 HOH HOH . J 6 HOH A 26 626 72 HOH HOH . J 6 HOH A 27 627 55 HOH HOH . J 6 HOH A 28 628 75 HOH HOH . J 6 HOH A 29 629 67 HOH HOH . J 6 HOH A 30 630 65 HOH HOH . J 6 HOH A 31 631 54 HOH HOH . J 6 HOH A 32 632 64 HOH HOH . J 6 HOH A 33 633 61 HOH HOH . J 6 HOH A 34 634 71 HOH HOH . J 6 HOH A 35 635 62 HOH HOH . J 6 HOH A 36 636 63 HOH HOH . J 6 HOH A 37 637 89 HOH HOH . J 6 HOH A 38 638 90 HOH HOH . J 6 HOH A 39 639 56 HOH HOH . J 6 HOH A 40 640 51 HOH HOH . J 6 HOH A 41 641 41 HOH HOH . K 6 HOH B 1 601 23 HOH HOH . K 6 HOH B 2 602 83 HOH HOH . K 6 HOH B 3 603 38 HOH HOH . K 6 HOH B 4 604 5 HOH HOH . K 6 HOH B 5 605 9 HOH HOH . K 6 HOH B 6 606 12 HOH HOH . K 6 HOH B 7 607 35 HOH HOH . K 6 HOH B 8 608 32 HOH HOH . K 6 HOH B 9 609 21 HOH HOH . K 6 HOH B 10 610 2 HOH HOH . K 6 HOH B 11 611 15 HOH HOH . K 6 HOH B 12 612 73 HOH HOH . K 6 HOH B 13 613 20 HOH HOH . K 6 HOH B 14 614 28 HOH HOH . K 6 HOH B 15 615 14 HOH HOH . K 6 HOH B 16 616 78 HOH HOH . K 6 HOH B 17 617 11 HOH HOH . K 6 HOH B 18 618 24 HOH HOH . K 6 HOH B 19 619 25 HOH HOH . K 6 HOH B 20 620 33 HOH HOH . K 6 HOH B 21 621 74 HOH HOH . K 6 HOH B 22 622 42 HOH HOH . K 6 HOH B 23 623 22 HOH HOH . K 6 HOH B 24 624 10 HOH HOH . K 6 HOH B 25 625 86 HOH HOH . K 6 HOH B 26 626 7 HOH HOH . K 6 HOH B 27 627 37 HOH HOH . K 6 HOH B 28 628 36 HOH HOH . K 6 HOH B 29 629 29 HOH HOH . K 6 HOH B 30 630 4 HOH HOH . K 6 HOH B 31 631 26 HOH HOH . K 6 HOH B 32 632 27 HOH HOH . K 6 HOH B 33 633 80 HOH HOH . K 6 HOH B 34 634 13 HOH HOH . K 6 HOH B 35 635 34 HOH HOH . K 6 HOH B 36 636 6 HOH HOH . K 6 HOH B 37 637 30 HOH HOH . K 6 HOH B 38 638 88 HOH HOH . K 6 HOH B 39 639 87 HOH HOH . K 6 HOH B 40 640 31 HOH HOH . K 6 HOH B 41 641 39 HOH HOH . K 6 HOH B 42 642 18 HOH HOH . K 6 HOH B 43 643 8 HOH HOH . K 6 HOH B 44 644 19 HOH HOH . K 6 HOH B 45 645 40 HOH HOH . K 6 HOH B 46 646 84 HOH HOH . K 6 HOH B 47 647 16 HOH HOH . K 6 HOH B 48 648 17 HOH HOH . K 6 HOH B 49 649 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 7AV . . . G 2 50.716 10.419 21.876 1 32.15 ? C1 7AV 501 B 1 HETATM 2 C C2 7AV . . . G 2 49.873 10.53 22.991 1 32.25 ? C2 7AV 501 B 1 HETATM 3 C C3 7AV . . . G 2 48.549 10.952 22.828 1 31.24 ? C3 7AV 501 B 1 HETATM 4 C C12 7AV . . . G 2 46.592 12.928 19.343 1 27.37 ? C12 7AV 501 B 1 HETATM 5 C C13 7AV . . . G 2 47.032 14.118 19.926 1 29.25 ? C13 7AV 501 B 1 HETATM 6 C C14 7AV . . . G 2 46.159 14.903 20.679 1 31.65 ? C14 7AV 501 B 1 HETATM 7 C C15 7AV . . . G 2 44.831 14.504 20.838 1 32.49 ? C15 7AV 501 B 1 HETATM 8 C C16 7AV . . . G 2 44.384 13.322 20.248 1 28.56 ? C16 7AV 501 B 1 HETATM 9 C C17 7AV . . . G 2 45.258 12.522 19.496 1 28.83 ? C17 7AV 501 B 1 HETATM 10 C C18 7AV . . . G 2 50.416 10.22 24.368 1 34.54 ? C18 7AV 501 B 1 HETATM 11 C C19 7AV . . . G 2 51.664 9.906 24.731 1 31.69 ? C19 7AV 501 B 1 HETATM 12 C C21 7AV . . . G 2 50.13 10.004 26.651 1 32.66 ? C21 7AV 501 B 1 HETATM 13 C C24 7AV . . . G 2 48.154 10.517 27.945 1 34.2 ? C24 7AV 501 B 1 HETATM 14 C C26 7AV . . . G 2 43.439 10.961 18.827 1 30.4 ? C26 7AV 501 B 1 HETATM 15 C C27 7AV . . . G 2 43.003 10.4 20.189 1 33.94 ? C27 7AV 501 B 1 HETATM 16 C C28 7AV . . . G 2 41.64 10.236 20.473 1 32.11 ? C28 7AV 501 B 1 HETATM 17 C C29 7AV . . . G 2 41.229 9.728 21.709 1 32.79 ? C29 7AV 501 B 1 HETATM 18 C C30 7AV . . . G 2 42.183 9.383 22.67 1 35.95 ? C30 7AV 501 B 1 HETATM 19 C C4 7AV . . . G 2 48.032 11.259 21.569 1 32.63 ? C4 7AV 501 B 1 HETATM 20 C C5 7AV . . . G 2 50.19 10.731 20.622 1 31.65 ? C5 7AV 501 B 1 HETATM 21 C C6 7AV . . . G 2 48.883 11.152 20.464 1 31.89 ? C6 7AV 501 B 1 HETATM 22 N N7 7AV . . . G 2 48.586 11.388 19.101 1 32.98 ? N7 7AV 501 B 1 HETATM 23 C C8 7AV . . . G 2 49.558 10.641 18.302 1 35.85 ? C8 7AV 501 B 1 HETATM 24 C C9 7AV . . . G 2 50.826 10.703 19.231 1 33.16 ? C9 7AV 501 B 1 HETATM 25 C C10 7AV . . . G 2 47.592 12.128 18.535 1 32.28 ? C10 7AV 501 B 1 HETATM 26 O O11 7AV . . . G 2 47.455 12.223 17.328 1 39.2 ? O11 7AV 501 B 1 HETATM 27 S S20 7AV . . . G 2 51.816 9.661 26.456 1 34.95 ? S20 7AV 501 B 1 HETATM 28 N N22 7AV . . . G 2 49.581 10.264 25.543 1 35.35 ? N22 7AV 501 B 1 HETATM 29 N N23 7AV . . . G 2 49.51 9.998 27.8 1 30.48 ? N23 7AV 501 B 1 HETATM 30 O O25 7AV . . . G 2 44.827 11.327 18.905 1 34.69 ? O25 7AV 501 B 1 HETATM 31 C C31 7AV . . . G 2 43.544 9.544 22.395 1 32 ? C31 7AV 501 B 1 HETATM 32 C C32 7AV . . . G 2 43.954 10.051 21.159 1 31.66 ? C32 7AV 501 B 1 HETATM 33 CL CL3 7AV . . . G 2 41.676 8.748 24.22 1 53.89 ? CL3 7AV 501 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #