data_5TFR # _model_server_result.job_id zJheVm_6-LtI7M5Svs085Q _model_server_result.datetime_utc '2024-10-28 02:23:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tfr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1003}' # _entry.id 5TFR # _exptl.entry_id 5TFR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TFR _cell.length_a 136.013 _cell.length_b 196.412 _cell.length_c 94.983 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TFR _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE2 GLU 443 A GLU 439 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 A NE2 HIS 447 A HIS 443 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc3 A SG CYS 452 A CYS 448 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc4 A SG CYS 455 A CYS 451 1_555 D ZN ZN . A ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.315 ? metalc ? metalc5 A NE2 HIS 718 A HIS 714 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.168 ? metalc ? metalc6 A SG CYS 734 A CYS 730 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc7 A SG CYS 853 A CYS 849 1_555 E ZN ZN . A ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc8 B OE2 GLU 443 B GLU 439 1_555 G ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? metalc ? metalc9 B NE2 HIS 447 B HIS 443 1_555 G ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc10 B SG CYS 452 B CYS 448 1_555 G ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.19 ? metalc ? metalc11 B SG CYS 455 B CYS 451 1_555 G ZN ZN . B ZN 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc12 B NE2 HIS 718 B HIS 714 1_555 H ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc13 B SG CYS 734 B CYS 730 1_555 H ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc14 B SG CYS 853 B CYS 849 1_555 H ZN ZN . B ZN 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.309 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 5TFR _atom_sites.fract_transf_matrix[1][1] 0.007352 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005091 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010528 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 1001 801 SAH SAH . D 3 ZN A 1 1002 901 ZN ZN . E 3 ZN A 1 1003 902 ZN ZN . F 2 SAH B 1 1001 802 SAH SAH . G 3 ZN B 1 1002 903 ZN ZN . H 3 ZN B 1 1003 904 ZN ZN . I 4 HOH A 1 1101 677 HOH HOH . I 4 HOH A 2 1102 333 HOH HOH . I 4 HOH A 3 1103 219 HOH HOH . I 4 HOH A 4 1104 466 HOH HOH . I 4 HOH A 5 1105 424 HOH HOH . I 4 HOH A 6 1106 47 HOH HOH . I 4 HOH A 7 1107 95 HOH HOH . I 4 HOH A 8 1108 722 HOH HOH . I 4 HOH A 9 1109 69 HOH HOH . I 4 HOH A 10 1110 386 HOH HOH . I 4 HOH A 11 1111 610 HOH HOH . I 4 HOH A 12 1112 237 HOH HOH . I 4 HOH A 13 1113 662 HOH HOH . I 4 HOH A 14 1114 347 HOH HOH . I 4 HOH A 15 1115 97 HOH HOH . I 4 HOH A 16 1116 40 HOH HOH . I 4 HOH A 17 1117 115 HOH HOH . I 4 HOH A 18 1118 597 HOH HOH . I 4 HOH A 19 1119 13 HOH HOH . I 4 HOH A 20 1120 21 HOH HOH . I 4 HOH A 21 1121 297 HOH HOH . I 4 HOH A 22 1122 454 HOH HOH . I 4 HOH A 23 1123 50 HOH HOH . I 4 HOH A 24 1124 48 HOH HOH . I 4 HOH A 25 1125 321 HOH HOH . I 4 HOH A 26 1126 306 HOH HOH . I 4 HOH A 27 1127 57 HOH HOH . I 4 HOH A 28 1128 552 HOH HOH . I 4 HOH A 29 1129 8 HOH HOH . I 4 HOH A 30 1130 133 HOH HOH . I 4 HOH A 31 1131 436 HOH HOH . I 4 HOH A 32 1132 703 HOH HOH . I 4 HOH A 33 1133 139 HOH HOH . I 4 HOH A 34 1134 673 HOH HOH . I 4 HOH A 35 1135 349 HOH HOH . I 4 HOH A 36 1136 562 HOH HOH . I 4 HOH A 37 1137 276 HOH HOH . I 4 HOH A 38 1138 520 HOH HOH . I 4 HOH A 39 1139 432 HOH HOH . I 4 HOH A 40 1140 277 HOH HOH . I 4 HOH A 41 1141 307 HOH HOH . I 4 HOH A 42 1142 279 HOH HOH . I 4 HOH A 43 1143 671 HOH HOH . I 4 HOH A 44 1144 438 HOH HOH . I 4 HOH A 45 1145 296 HOH HOH . I 4 HOH A 46 1146 491 HOH HOH . I 4 HOH A 47 1147 404 HOH HOH . I 4 HOH A 48 1148 519 HOH HOH . I 4 HOH A 49 1149 171 HOH HOH . I 4 HOH A 50 1150 113 HOH HOH . I 4 HOH A 51 1151 345 HOH HOH . I 4 HOH A 52 1152 38 HOH HOH . I 4 HOH A 53 1153 261 HOH HOH . I 4 HOH A 54 1154 360 HOH HOH . I 4 HOH A 55 1155 122 HOH HOH . I 4 HOH A 56 1156 168 HOH HOH . I 4 HOH A 57 1157 350 HOH HOH . I 4 HOH A 58 1158 16 HOH HOH . I 4 HOH A 59 1159 644 HOH HOH . I 4 HOH A 60 1160 109 HOH HOH . I 4 HOH A 61 1161 52 HOH HOH . I 4 HOH A 62 1162 34 HOH HOH . I 4 HOH A 63 1163 42 HOH HOH . I 4 HOH A 64 1164 590 HOH HOH . I 4 HOH A 65 1165 98 HOH HOH . I 4 HOH A 66 1166 271 HOH HOH . I 4 HOH A 67 1167 449 HOH HOH . I 4 HOH A 68 1168 431 HOH HOH . I 4 HOH A 69 1169 196 HOH HOH . I 4 HOH A 70 1170 169 HOH HOH . I 4 HOH A 71 1171 553 HOH HOH . I 4 HOH A 72 1172 313 HOH HOH . I 4 HOH A 73 1173 312 HOH HOH . I 4 HOH A 74 1174 55 HOH HOH . I 4 HOH A 75 1175 248 HOH HOH . I 4 HOH A 76 1176 73 HOH HOH . I 4 HOH A 77 1177 537 HOH HOH . I 4 HOH A 78 1178 295 HOH HOH . I 4 HOH A 79 1179 198 HOH HOH . I 4 HOH A 80 1180 413 HOH HOH . I 4 HOH A 81 1181 236 HOH HOH . I 4 HOH A 82 1182 221 HOH HOH . I 4 HOH A 83 1183 189 HOH HOH . I 4 HOH A 84 1184 70 HOH HOH . I 4 HOH A 85 1185 94 HOH HOH . I 4 HOH A 86 1186 67 HOH HOH . I 4 HOH A 87 1187 14 HOH HOH . I 4 HOH A 88 1188 451 HOH HOH . I 4 HOH A 89 1189 107 HOH HOH . I 4 HOH A 90 1190 554 HOH HOH . I 4 HOH A 91 1191 72 HOH HOH . I 4 HOH A 92 1192 463 HOH HOH . I 4 HOH A 93 1193 33 HOH HOH . I 4 HOH A 94 1194 308 HOH HOH . I 4 HOH A 95 1195 539 HOH HOH . I 4 HOH A 96 1196 85 HOH HOH . I 4 HOH A 97 1197 65 HOH HOH . I 4 HOH A 98 1198 86 HOH HOH . I 4 HOH A 99 1199 509 HOH HOH . I 4 HOH A 100 1200 74 HOH HOH . I 4 HOH A 101 1201 378 HOH HOH . I 4 HOH A 102 1202 165 HOH HOH . I 4 HOH A 103 1203 396 HOH HOH . I 4 HOH A 104 1204 493 HOH HOH . I 4 HOH A 105 1205 302 HOH HOH . I 4 HOH A 106 1206 560 HOH HOH . I 4 HOH A 107 1207 103 HOH HOH . I 4 HOH A 108 1208 274 HOH HOH . I 4 HOH A 109 1209 68 HOH HOH . I 4 HOH A 110 1210 75 HOH HOH . I 4 HOH A 111 1211 197 HOH HOH . I 4 HOH A 112 1212 90 HOH HOH . I 4 HOH A 113 1213 182 HOH HOH . I 4 HOH A 114 1214 310 HOH HOH . I 4 HOH A 115 1215 170 HOH HOH . I 4 HOH A 116 1216 76 HOH HOH . I 4 HOH A 117 1217 112 HOH HOH . I 4 HOH A 118 1218 134 HOH HOH . I 4 HOH A 119 1219 383 HOH HOH . I 4 HOH A 120 1220 723 HOH HOH . I 4 HOH A 121 1221 66 HOH HOH . I 4 HOH A 122 1222 31 HOH HOH . I 4 HOH A 123 1223 116 HOH HOH . I 4 HOH A 124 1224 249 HOH HOH . I 4 HOH A 125 1225 39 HOH HOH . I 4 HOH A 126 1226 250 HOH HOH . I 4 HOH A 127 1227 43 HOH HOH . I 4 HOH A 128 1228 242 HOH HOH . I 4 HOH A 129 1229 653 HOH HOH . I 4 HOH A 130 1230 540 HOH HOH . I 4 HOH A 131 1231 281 HOH HOH . I 4 HOH A 132 1232 166 HOH HOH . I 4 HOH A 133 1233 214 HOH HOH . I 4 HOH A 134 1234 679 HOH HOH . I 4 HOH A 135 1235 377 HOH HOH . I 4 HOH A 136 1236 10 HOH HOH . I 4 HOH A 137 1237 152 HOH HOH . I 4 HOH A 138 1238 88 HOH HOH . I 4 HOH A 139 1239 388 HOH HOH . I 4 HOH A 140 1240 572 HOH HOH . J 4 HOH B 1 1101 636 HOH HOH . J 4 HOH B 2 1102 28 HOH HOH . J 4 HOH B 3 1103 440 HOH HOH . J 4 HOH B 4 1104 588 HOH HOH . J 4 HOH B 5 1105 15 HOH HOH . J 4 HOH B 6 1106 78 HOH HOH . J 4 HOH B 7 1107 143 HOH HOH . J 4 HOH B 8 1108 247 HOH HOH . J 4 HOH B 9 1109 459 HOH HOH . J 4 HOH B 10 1110 270 HOH HOH . J 4 HOH B 11 1111 83 HOH HOH . J 4 HOH B 12 1112 186 HOH HOH . J 4 HOH B 13 1113 162 HOH HOH . J 4 HOH B 14 1114 71 HOH HOH . J 4 HOH B 15 1115 121 HOH HOH . J 4 HOH B 16 1116 301 HOH HOH . J 4 HOH B 17 1117 445 HOH HOH . J 4 HOH B 18 1118 294 HOH HOH . J 4 HOH B 19 1119 127 HOH HOH . J 4 HOH B 20 1120 19 HOH HOH . J 4 HOH B 21 1121 534 HOH HOH . J 4 HOH B 22 1122 184 HOH HOH . J 4 HOH B 23 1123 398 HOH HOH . J 4 HOH B 24 1124 193 HOH HOH . J 4 HOH B 25 1125 504 HOH HOH . J 4 HOH B 26 1126 559 HOH HOH . J 4 HOH B 27 1127 611 HOH HOH . J 4 HOH B 28 1128 489 HOH HOH . J 4 HOH B 29 1129 53 HOH HOH . J 4 HOH B 30 1130 155 HOH HOH . J 4 HOH B 31 1131 697 HOH HOH . J 4 HOH B 32 1132 367 HOH HOH . J 4 HOH B 33 1133 608 HOH HOH . J 4 HOH B 34 1134 59 HOH HOH . J 4 HOH B 35 1135 27 HOH HOH . J 4 HOH B 36 1136 496 HOH HOH . J 4 HOH B 37 1137 452 HOH HOH . J 4 HOH B 38 1138 300 HOH HOH . J 4 HOH B 39 1139 9 HOH HOH . J 4 HOH B 40 1140 60 HOH HOH . J 4 HOH B 41 1141 46 HOH HOH . J 4 HOH B 42 1142 314 HOH HOH . J 4 HOH B 43 1143 327 HOH HOH . J 4 HOH B 44 1144 23 HOH HOH . J 4 HOH B 45 1145 100 HOH HOH . J 4 HOH B 46 1146 206 HOH HOH . J 4 HOH B 47 1147 635 HOH HOH . J 4 HOH B 48 1148 603 HOH HOH . J 4 HOH B 49 1149 24 HOH HOH . J 4 HOH B 50 1150 710 HOH HOH . J 4 HOH B 51 1151 119 HOH HOH . J 4 HOH B 52 1152 354 HOH HOH . J 4 HOH B 53 1153 305 HOH HOH . J 4 HOH B 54 1154 516 HOH HOH . J 4 HOH B 55 1155 426 HOH HOH . J 4 HOH B 56 1156 41 HOH HOH . J 4 HOH B 57 1157 144 HOH HOH . J 4 HOH B 58 1158 26 HOH HOH . J 4 HOH B 59 1159 265 HOH HOH . J 4 HOH B 60 1160 174 HOH HOH . J 4 HOH B 61 1161 138 HOH HOH . J 4 HOH B 62 1162 685 HOH HOH . J 4 HOH B 63 1163 62 HOH HOH . J 4 HOH B 64 1164 485 HOH HOH . J 4 HOH B 65 1165 12 HOH HOH . J 4 HOH B 66 1166 130 HOH HOH . J 4 HOH B 67 1167 190 HOH HOH . J 4 HOH B 68 1168 502 HOH HOH . J 4 HOH B 69 1169 637 HOH HOH . J 4 HOH B 70 1170 460 HOH HOH . J 4 HOH B 71 1171 111 HOH HOH . J 4 HOH B 72 1172 124 HOH HOH . J 4 HOH B 73 1173 108 HOH HOH . J 4 HOH B 74 1174 455 HOH HOH . J 4 HOH B 75 1175 79 HOH HOH . J 4 HOH B 76 1176 207 HOH HOH . J 4 HOH B 77 1177 621 HOH HOH . J 4 HOH B 78 1178 104 HOH HOH . J 4 HOH B 79 1179 392 HOH HOH . J 4 HOH B 80 1180 524 HOH HOH . J 4 HOH B 81 1181 691 HOH HOH . J 4 HOH B 82 1182 547 HOH HOH . J 4 HOH B 83 1183 260 HOH HOH . J 4 HOH B 84 1184 389 HOH HOH . J 4 HOH B 85 1185 148 HOH HOH . J 4 HOH B 86 1186 462 HOH HOH . J 4 HOH B 87 1187 316 HOH HOH . J 4 HOH B 88 1188 643 HOH HOH . J 4 HOH B 89 1189 342 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 6.312 _atom_site.Cartn_y -52.677 _atom_site.Cartn_z -6.774 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 85.03 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 1003 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #