data_5TG6 # _model_server_result.job_id 8nCZWMQl-oW03fEfM0d-fg _model_server_result.datetime_utc '2024-11-24 16:57:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tg6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 5TG6 # _exptl.entry_id 5TG6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 249.071 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'tert-butyl (1-hydroxy-1,3-dihydro-2,1-benzoxaborol-6-yl)carbamate' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 5TG6 _cell.length_a 102.418 _cell.length_b 102.418 _cell.length_c 85.049 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TG6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 17 A ASP 47 1_555 A N ABA 18 A ABA 48 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale2 A C ABA 18 A ABA 48 1_555 A N ALA 19 A ALA 49 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 A OG SER 51 A SER 81 1_555 B B9 J4W . A J4W 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.461 ? covale ? covale4 A C PHE 53 A PHE 83 1_555 A N KCX 54 A KCX 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.341 ? covale ? covale5 A C KCX 54 A KCX 84 1_555 A N MET 55 A MET 85 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C12 H16 B N O4' _chem_comp.formula_weight 249.071 _chem_comp.id J4W _chem_comp.mon_nstd_flag . _chem_comp.name 'tert-butyl (1-hydroxy-1,3-dihydro-2,1-benzoxaborol-6-yl)carbamate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C14 C12 J4W sing 179 n n C15 C12 J4W sing 180 n n C13 C12 J4W sing 181 n n C12 O11 J4W sing 182 n n O11 C8 J4W sing 183 n n O9 C8 J4W doub 184 n n C8 N1 J4W sing 185 n n N1 C5 J4W sing 186 n n C5 C4 J4W doub 187 n y C5 C6 J4W sing 188 n y C4 C3 J4W sing 189 n y C6 C7 J4W doub 190 n y O10 B9 J4W sing 191 n n C3 B9 J4W sing 192 n n C3 C2 J4W doub 193 n y B9 O8 J4W sing 194 n n C7 C2 J4W sing 195 n y C2 C1 J4W sing 196 n n O8 C1 J4W sing 197 n n C15 H1 J4W sing 198 n n C15 H2 J4W sing 199 n n C15 H3 J4W sing 200 n n C14 H4 J4W sing 201 n n C14 H5 J4W sing 202 n n C14 H6 J4W sing 203 n n C13 H7 J4W sing 204 n n C13 H8 J4W sing 205 n n C13 H9 J4W sing 206 n n N1 H10 J4W sing 207 n n C6 H11 J4W sing 208 n n C7 H12 J4W sing 209 n n C4 H13 J4W sing 210 n n O10 H14 J4W sing 211 n n C1 H15 J4W sing 212 n n C1 H16 J4W sing 213 n n # _atom_sites.entry_id 5TG6 _atom_sites.fract_transf_matrix[1][1] 0.009764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 J4W A 1 301 1 J4W J4W . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 BCT A 1 304 1 BCT BCT . F 5 HOH A 1 401 67 HOH HOH . F 5 HOH A 2 402 73 HOH HOH . F 5 HOH A 3 403 197 HOH HOH . F 5 HOH A 4 404 102 HOH HOH . F 5 HOH A 5 405 40 HOH HOH . F 5 HOH A 6 406 33 HOH HOH . F 5 HOH A 7 407 198 HOH HOH . F 5 HOH A 8 408 129 HOH HOH . F 5 HOH A 9 409 146 HOH HOH . F 5 HOH A 10 410 140 HOH HOH . F 5 HOH A 11 411 177 HOH HOH . F 5 HOH A 12 412 42 HOH HOH . F 5 HOH A 13 413 155 HOH HOH . F 5 HOH A 14 414 87 HOH HOH . F 5 HOH A 15 415 147 HOH HOH . F 5 HOH A 16 416 150 HOH HOH . F 5 HOH A 17 417 65 HOH HOH . F 5 HOH A 18 418 9 HOH HOH . F 5 HOH A 19 419 59 HOH HOH . F 5 HOH A 20 420 61 HOH HOH . F 5 HOH A 21 421 55 HOH HOH . F 5 HOH A 22 422 181 HOH HOH . F 5 HOH A 23 423 139 HOH HOH . F 5 HOH A 24 424 18 HOH HOH . F 5 HOH A 25 425 25 HOH HOH . F 5 HOH A 26 426 158 HOH HOH . F 5 HOH A 27 427 124 HOH HOH . F 5 HOH A 28 428 20 HOH HOH . F 5 HOH A 29 429 57 HOH HOH . F 5 HOH A 30 430 50 HOH HOH . F 5 HOH A 31 431 133 HOH HOH . F 5 HOH A 32 432 81 HOH HOH . F 5 HOH A 33 433 131 HOH HOH . F 5 HOH A 34 434 157 HOH HOH . F 5 HOH A 35 435 4 HOH HOH . F 5 HOH A 36 436 175 HOH HOH . F 5 HOH A 37 437 51 HOH HOH . F 5 HOH A 38 438 96 HOH HOH . F 5 HOH A 39 439 176 HOH HOH . F 5 HOH A 40 440 21 HOH HOH . F 5 HOH A 41 441 178 HOH HOH . F 5 HOH A 42 442 35 HOH HOH . F 5 HOH A 43 443 144 HOH HOH . F 5 HOH A 44 444 156 HOH HOH . F 5 HOH A 45 445 120 HOH HOH . F 5 HOH A 46 446 32 HOH HOH . F 5 HOH A 47 447 77 HOH HOH . F 5 HOH A 48 448 36 HOH HOH . F 5 HOH A 49 449 12 HOH HOH . F 5 HOH A 50 450 159 HOH HOH . F 5 HOH A 51 451 111 HOH HOH . F 5 HOH A 52 452 95 HOH HOH . F 5 HOH A 53 453 91 HOH HOH . F 5 HOH A 54 454 184 HOH HOH . F 5 HOH A 55 455 7 HOH HOH . F 5 HOH A 56 456 56 HOH HOH . F 5 HOH A 57 457 48 HOH HOH . F 5 HOH A 58 458 89 HOH HOH . F 5 HOH A 59 459 45 HOH HOH . F 5 HOH A 60 460 30 HOH HOH . F 5 HOH A 61 461 122 HOH HOH . F 5 HOH A 62 462 189 HOH HOH . F 5 HOH A 63 463 62 HOH HOH . F 5 HOH A 64 464 43 HOH HOH . F 5 HOH A 65 465 13 HOH HOH . F 5 HOH A 66 466 180 HOH HOH . F 5 HOH A 67 467 183 HOH HOH . F 5 HOH A 68 468 196 HOH HOH . F 5 HOH A 69 469 64 HOH HOH . F 5 HOH A 70 470 143 HOH HOH . F 5 HOH A 71 471 141 HOH HOH . F 5 HOH A 72 472 80 HOH HOH . F 5 HOH A 73 473 94 HOH HOH . F 5 HOH A 74 474 92 HOH HOH . F 5 HOH A 75 475 190 HOH HOH . F 5 HOH A 76 476 23 HOH HOH . F 5 HOH A 77 477 16 HOH HOH . F 5 HOH A 78 478 172 HOH HOH . F 5 HOH A 79 479 34 HOH HOH . F 5 HOH A 80 480 142 HOH HOH . F 5 HOH A 81 481 11 HOH HOH . F 5 HOH A 82 482 179 HOH HOH . F 5 HOH A 83 483 90 HOH HOH . F 5 HOH A 84 484 151 HOH HOH . F 5 HOH A 85 485 104 HOH HOH . F 5 HOH A 86 486 5 HOH HOH . F 5 HOH A 87 487 15 HOH HOH . F 5 HOH A 88 488 60 HOH HOH . F 5 HOH A 89 489 160 HOH HOH . F 5 HOH A 90 490 39 HOH HOH . F 5 HOH A 91 491 83 HOH HOH . F 5 HOH A 92 492 148 HOH HOH . F 5 HOH A 93 493 154 HOH HOH . F 5 HOH A 94 494 49 HOH HOH . F 5 HOH A 95 495 97 HOH HOH . F 5 HOH A 96 496 188 HOH HOH . F 5 HOH A 97 497 110 HOH HOH . F 5 HOH A 98 498 24 HOH HOH . F 5 HOH A 99 499 162 HOH HOH . F 5 HOH A 100 500 3 HOH HOH . F 5 HOH A 101 501 112 HOH HOH . F 5 HOH A 102 502 10 HOH HOH . F 5 HOH A 103 503 37 HOH HOH . F 5 HOH A 104 504 194 HOH HOH . F 5 HOH A 105 505 125 HOH HOH . F 5 HOH A 106 506 53 HOH HOH . F 5 HOH A 107 507 93 HOH HOH . F 5 HOH A 108 508 26 HOH HOH . F 5 HOH A 109 509 99 HOH HOH . F 5 HOH A 110 510 130 HOH HOH . F 5 HOH A 111 511 101 HOH HOH . F 5 HOH A 112 512 72 HOH HOH . F 5 HOH A 113 513 153 HOH HOH . F 5 HOH A 114 514 19 HOH HOH . F 5 HOH A 115 515 199 HOH HOH . F 5 HOH A 116 516 28 HOH HOH . F 5 HOH A 117 517 79 HOH HOH . F 5 HOH A 118 518 44 HOH HOH . F 5 HOH A 119 519 128 HOH HOH . F 5 HOH A 120 520 54 HOH HOH . F 5 HOH A 121 521 14 HOH HOH . F 5 HOH A 122 522 22 HOH HOH . F 5 HOH A 123 523 84 HOH HOH . F 5 HOH A 124 524 115 HOH HOH . F 5 HOH A 125 525 69 HOH HOH . F 5 HOH A 126 526 17 HOH HOH . F 5 HOH A 127 527 100 HOH HOH . F 5 HOH A 128 528 195 HOH HOH . F 5 HOH A 129 529 116 HOH HOH . F 5 HOH A 130 530 52 HOH HOH . F 5 HOH A 131 531 200 HOH HOH . F 5 HOH A 132 532 41 HOH HOH . F 5 HOH A 133 533 203 HOH HOH . F 5 HOH A 134 534 86 HOH HOH . F 5 HOH A 135 535 118 HOH HOH . F 5 HOH A 136 536 103 HOH HOH . F 5 HOH A 137 537 108 HOH HOH . F 5 HOH A 138 538 152 HOH HOH . F 5 HOH A 139 539 201 HOH HOH . F 5 HOH A 140 540 46 HOH HOH . F 5 HOH A 141 541 202 HOH HOH . F 5 HOH A 142 542 88 HOH HOH . F 5 HOH A 143 543 6 HOH HOH . F 5 HOH A 144 544 145 HOH HOH . F 5 HOH A 145 545 192 HOH HOH . F 5 HOH A 146 546 169 HOH HOH . F 5 HOH A 147 547 105 HOH HOH . F 5 HOH A 148 548 74 HOH HOH . F 5 HOH A 149 549 182 HOH HOH . F 5 HOH A 150 550 38 HOH HOH . F 5 HOH A 151 551 2 HOH HOH . F 5 HOH A 152 552 164 HOH HOH . F 5 HOH A 153 553 63 HOH HOH . F 5 HOH A 154 554 109 HOH HOH . F 5 HOH A 155 555 149 HOH HOH . F 5 HOH A 156 556 70 HOH HOH . F 5 HOH A 157 557 85 HOH HOH . F 5 HOH A 158 558 171 HOH HOH . F 5 HOH A 159 559 1 HOH HOH . F 5 HOH A 160 560 98 HOH HOH . F 5 HOH A 161 561 66 HOH HOH . F 5 HOH A 162 562 8 HOH HOH . F 5 HOH A 163 563 132 HOH HOH . F 5 HOH A 164 564 78 HOH HOH . F 5 HOH A 165 565 27 HOH HOH . F 5 HOH A 166 566 127 HOH HOH . F 5 HOH A 167 567 193 HOH HOH . F 5 HOH A 168 568 114 HOH HOH . F 5 HOH A 169 569 121 HOH HOH . F 5 HOH A 170 570 187 HOH HOH . F 5 HOH A 171 571 126 HOH HOH . F 5 HOH A 172 572 170 HOH HOH . F 5 HOH A 173 573 186 HOH HOH . F 5 HOH A 174 574 134 HOH HOH . F 5 HOH A 175 575 106 HOH HOH . F 5 HOH A 176 576 138 HOH HOH . F 5 HOH A 177 577 185 HOH HOH . F 5 HOH A 178 578 68 HOH HOH . F 5 HOH A 179 579 165 HOH HOH . F 5 HOH A 180 580 173 HOH HOH . F 5 HOH A 181 581 107 HOH HOH . F 5 HOH A 182 582 76 HOH HOH . F 5 HOH A 183 583 166 HOH HOH . F 5 HOH A 184 584 71 HOH HOH . F 5 HOH A 185 585 113 HOH HOH . F 5 HOH A 186 586 119 HOH HOH . F 5 HOH A 187 587 174 HOH HOH . F 5 HOH A 188 588 123 HOH HOH . F 5 HOH A 189 589 117 HOH HOH . F 5 HOH A 190 590 58 HOH HOH . F 5 HOH A 191 591 191 HOH HOH . F 5 HOH A 192 592 163 HOH HOH . F 5 HOH A 193 593 47 HOH HOH . F 5 HOH A 194 594 167 HOH HOH . F 5 HOH A 195 595 82 HOH HOH . F 5 HOH A 196 596 136 HOH HOH . F 5 HOH A 197 597 161 HOH HOH . F 5 HOH A 198 598 168 HOH HOH . F 5 HOH A 199 599 137 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O9 J4W . . . B 2 2.671 30.891 -17.898 1 36.29 ? O9 J4W 301 A 1 HETATM 2 C C8 J4W . . . B 2 3.788 31.005 -17.383 1 37.03 ? C8 J4W 301 A 1 HETATM 3 O O11 J4W . . . B 2 5.006 31.082 -18.192 1 36.32 ? O11 J4W 301 A 1 HETATM 4 C C12 J4W . . . B 2 5.04 31.421 -19.592 1 41.79 ? C12 J4W 301 A 1 HETATM 5 C C15 J4W . . . B 2 6.518 31.504 -19.991 1 40.76 ? C15 J4W 301 A 1 HETATM 6 C C14 J4W . . . B 2 4.374 30.328 -20.417 1 42.04 ? C14 J4W 301 A 1 HETATM 7 C C13 J4W . . . B 2 4.351 32.772 -19.846 1 40.38 ? C13 J4W 301 A 1 HETATM 8 N N1 J4W . . . B 2 4.017 31.21 -16.092 1 27.75 ? N1 J4W 301 A 1 HETATM 9 C C5 J4W . . . B 2 3.036 31.363 -15.064 1 23.71 ? C5 J4W 301 A 1 HETATM 10 C C6 J4W . . . B 2 3.263 32.45 -14.248 1 22.22 ? C6 J4W 301 A 1 HETATM 11 C C7 J4W . . . B 2 2.493 32.622 -13.12 1 22.53 ? C7 J4W 301 A 1 HETATM 12 C C2 J4W . . . B 2 1.467 31.697 -12.856 1 21.04 ? C2 J4W 301 A 1 HETATM 13 C C4 J4W . . . B 2 2.023 30.402 -14.784 1 21.22 ? C4 J4W 301 A 1 HETATM 14 C C3 J4W . . . B 2 1.299 30.551 -13.587 1 20.03 ? C3 J4W 301 A 1 HETATM 15 B B9 J4W . . . B 2 0.027 29.801 -13.046 1 20.48 ? B9 J4W 301 A 1 HETATM 16 O O10 J4W . . . B 2 -1.146 29.948 -14.021 1 17.97 ? O10 J4W 301 A 1 HETATM 17 O O8 J4W . . . B 2 -0.275 30.574 -11.851 1 19.64 ? O8 J4W 301 A 1 HETATM 18 C C1 J4W . . . B 2 0.493 31.795 -11.74 1 19.76 ? C1 J4W 301 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 344 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #