data_5TIJ
#
_model_server_result.job_id            Qex6VXCsEgIomzXiOHTxWA 
_model_server_result.datetime_utc      '2024-11-21 17:24:18' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tij 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":501}' 
#
_entry.id    5TIJ 
#
_exptl.entry_id    5TIJ 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              211.11 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '((3S,5S)-1,5-dihydroxy-3-methyl-2-oxopyrrolidin-3-yl)phosphonic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TIJ 
_cell.length_a            68.25 
_cell.length_b            108.38 
_cell.length_c            117.48 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TIJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A OD1 ASP 245 A ASP 245 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.123 ? 
metalc ? metalc2 A OD2 ASP 245 A ASP 245 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.809 ? 
metalc ? metalc3 A OE2 GLU 293 A GLU 293 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? 
metalc ? metalc4 A OD1 ASP 318 A ASP 318 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc5 C O10 5TX . A 5TX 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.347 ? 
metalc ? metalc6 C O11 5TX . A 5TX 501 1_555 D MG MG . A MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? 
metalc ? metalc7 D MG MG . A MG 502 1_555 G O HOH . A HOH 622 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? 
metalc ? metalc8 B OD1 ASP 245 B ASP 245 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? 
metalc ? metalc9 B OD2 ASP 245 B ASP 245 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc10 B OE2 GLU 293 B GLU 293 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc11 B OD1 ASP 318 B ASP 318 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.155 ? 
metalc ? metalc12 E O10 5TX . B 5TX 501 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? 
metalc ? metalc13 E O11 5TX . B 5TX 501 1_555 F MG MG . B MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? 
metalc ? metalc14 F MG MG . B MG 502 1_555 H O HOH . B HOH 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.211 ? 
#
_chem_comp.formula           'C5 H10 N O6 P' 
_chem_comp.formula_weight    211.11 
_chem_comp.id                5TX 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '((3S,5S)-1,5-dihydroxy-3-methyl-2-oxopyrrolidin-3-yl)phosphonic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O11 N12 5TX sing 1 n n 
N12 C01 5TX sing 2 n n 
N12 C04 5TX sing 3 n n 
O13 C01 5TX sing 4 n n 
O10 C04 5TX doub 5 n n 
C01 C02 5TX sing 6 n n 
C04 C03 5TX sing 7 n n 
O07 P05 5TX doub 8 n n 
C02 C03 5TX sing 9 n n 
C03 P05 5TX sing 10 n n 
C03 C09 5TX sing 11 n n 
O06 P05 5TX sing 12 n n 
P05 O08 5TX sing 13 n n 
C01 H1 5TX sing 14 n n 
C02 H2 5TX sing 15 n n 
C02 H3 5TX sing 16 n n 
O06 H4 5TX sing 17 n n 
O08 H5 5TX sing 18 n n 
C09 H6 5TX sing 19 n n 
C09 H7 5TX sing 20 n n 
C09 H8 5TX sing 21 n n 
O13 H9 5TX sing 22 n n 
O11 H10 5TX sing 23 n n 
#
_atom_sites.entry_id                     5TIJ 
_atom_sites.fract_transf_matrix[1][1]    0.014652 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009227 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008512 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 5TX A 1 501 435 5TX MSF . 
D 3 MG A 1 502 436 MG MG . 
E 2 5TX B 1 501 435 5TX MSF . 
F 3 MG B 1 502 436 MG MG . 
G 4 HOH A 1 601 458 HOH HOH . 
G 4 HOH A 2 602 485 HOH HOH . 
G 4 HOH A 3 603 466 HOH HOH . 
G 4 HOH A 4 604 492 HOH HOH . 
G 4 HOH A 5 605 489 HOH HOH . 
G 4 HOH A 6 606 476 HOH HOH . 
G 4 HOH A 7 607 491 HOH HOH . 
G 4 HOH A 8 608 499 HOH HOH . 
G 4 HOH A 9 609 453 HOH HOH . 
G 4 HOH A 10 610 497 HOH HOH . 
G 4 HOH A 11 611 448 HOH HOH . 
G 4 HOH A 12 612 494 HOH HOH . 
G 4 HOH A 13 613 465 HOH HOH . 
G 4 HOH A 14 614 498 HOH HOH . 
G 4 HOH A 15 615 455 HOH HOH . 
G 4 HOH A 16 616 460 HOH HOH . 
G 4 HOH A 17 617 445 HOH HOH . 
G 4 HOH A 18 618 496 HOH HOH . 
G 4 HOH A 19 619 439 HOH HOH . 
G 4 HOH A 20 620 459 HOH HOH . 
G 4 HOH A 21 621 480 HOH HOH . 
G 4 HOH A 22 622 481 HOH HOH . 
G 4 HOH A 23 623 449 HOH HOH . 
G 4 HOH A 24 624 473 HOH HOH . 
G 4 HOH A 25 625 469 HOH HOH . 
G 4 HOH A 26 626 444 HOH HOH . 
G 4 HOH A 27 627 477 HOH HOH . 
G 4 HOH A 28 628 441 HOH HOH . 
G 4 HOH A 29 629 468 HOH HOH . 
G 4 HOH A 30 630 475 HOH HOH . 
G 4 HOH A 31 631 456 HOH HOH . 
G 4 HOH A 32 632 478 HOH HOH . 
G 4 HOH A 33 633 488 HOH HOH . 
G 4 HOH A 34 634 451 HOH HOH . 
G 4 HOH A 35 635 450 HOH HOH . 
G 4 HOH A 36 636 471 HOH HOH . 
G 4 HOH A 37 637 454 HOH HOH . 
G 4 HOH A 38 638 464 HOH HOH . 
G 4 HOH A 39 639 482 HOH HOH . 
G 4 HOH A 40 640 437 HOH HOH . 
G 4 HOH A 41 641 467 HOH HOH . 
G 4 HOH A 42 642 462 HOH HOH . 
G 4 HOH A 43 643 452 HOH HOH . 
G 4 HOH A 44 644 438 HOH HOH . 
G 4 HOH A 45 645 484 HOH HOH . 
G 4 HOH A 46 646 463 HOH HOH . 
G 4 HOH A 47 647 447 HOH HOH . 
G 4 HOH A 48 648 490 HOH HOH . 
G 4 HOH A 49 649 442 HOH HOH . 
G 4 HOH A 50 650 483 HOH HOH . 
G 4 HOH A 51 651 457 HOH HOH . 
G 4 HOH A 52 652 472 HOH HOH . 
G 4 HOH A 53 653 440 HOH HOH . 
G 4 HOH A 54 654 495 HOH HOH . 
G 4 HOH A 55 655 486 HOH HOH . 
G 4 HOH A 56 656 493 HOH HOH . 
G 4 HOH A 57 657 446 HOH HOH . 
G 4 HOH A 58 658 461 HOH HOH . 
G 4 HOH A 59 659 470 HOH HOH . 
G 4 HOH A 60 660 474 HOH HOH . 
G 4 HOH A 61 661 487 HOH HOH . 
G 4 HOH A 62 662 443 HOH HOH . 
H 4 HOH B 1 601 473 HOH HOH . 
H 4 HOH B 2 602 445 HOH HOH . 
H 4 HOH B 3 603 477 HOH HOH . 
H 4 HOH B 4 604 460 HOH HOH . 
H 4 HOH B 5 605 461 HOH HOH . 
H 4 HOH B 6 606 451 HOH HOH . 
H 4 HOH B 7 607 481 HOH HOH . 
H 4 HOH B 8 608 446 HOH HOH . 
H 4 HOH B 9 609 452 HOH HOH . 
H 4 HOH B 10 610 443 HOH HOH . 
H 4 HOH B 11 611 472 HOH HOH . 
H 4 HOH B 12 612 470 HOH HOH . 
H 4 HOH B 13 613 437 HOH HOH . 
H 4 HOH B 14 614 444 HOH HOH . 
H 4 HOH B 15 615 471 HOH HOH . 
H 4 HOH B 16 616 475 HOH HOH . 
H 4 HOH B 17 617 455 HOH HOH . 
H 4 HOH B 18 618 463 HOH HOH . 
H 4 HOH B 19 619 468 HOH HOH . 
H 4 HOH B 20 620 483 HOH HOH . 
H 4 HOH B 21 621 474 HOH HOH . 
H 4 HOH B 22 622 482 HOH HOH . 
H 4 HOH B 23 623 462 HOH HOH . 
H 4 HOH B 24 624 448 HOH HOH . 
H 4 HOH B 25 625 438 HOH HOH . 
H 4 HOH B 26 626 459 HOH HOH . 
H 4 HOH B 27 627 464 HOH HOH . 
H 4 HOH B 28 628 453 HOH HOH . 
H 4 HOH B 29 629 441 HOH HOH . 
H 4 HOH B 30 630 465 HOH HOH . 
H 4 HOH B 31 631 440 HOH HOH . 
H 4 HOH B 32 632 454 HOH HOH . 
H 4 HOH B 33 633 439 HOH HOH . 
H 4 HOH B 34 634 466 HOH HOH . 
H 4 HOH B 35 635 478 HOH HOH . 
H 4 HOH B 36 636 457 HOH HOH . 
H 4 HOH B 37 637 469 HOH HOH . 
H 4 HOH B 38 638 479 HOH HOH . 
H 4 HOH B 39 639 447 HOH HOH . 
H 4 HOH B 40 640 449 HOH HOH . 
H 4 HOH B 41 641 456 HOH HOH . 
H 4 HOH B 42 642 442 HOH HOH . 
H 4 HOH B 43 643 450 HOH HOH . 
H 4 HOH B 44 644 467 HOH HOH . 
H 4 HOH B 45 645 480 HOH HOH . 
H 4 HOH B 46 646 458 HOH HOH . 
H 4 HOH B 47 647 479 HOH HOH . 
H 4 HOH B 48 648 476 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C01 5TX . . . C 2 -7.949 3.563 -25.285 1 23.54 ? C01 5TX 501 A 1 
HETATM 2 C C02 5TX . . . C 2 -6.539 3.253 -24.674 1 18.49 ? C02 5TX 501 A 1 
HETATM 3 C C03 5TX . . . C 2 -6.719 1.974 -23.816 1 31.76 ? C03 5TX 501 A 1 
HETATM 4 C C04 5TX . . . C 2 -8.088 1.852 -23.626 1 29.96 ? C04 5TX 501 A 1 
HETATM 5 P P05 5TX . . . C 2 -5.996 0.501 -24.825 1 33.57 ? P05 5TX 501 A 1 
HETATM 6 O O06 5TX . . . C 2 -4.51 0.809 -25.044 1 35.69 ? O06 5TX 501 A 1 
HETATM 7 O O07 5TX . . . C 2 -6.816 0.497 -26.118 1 48.69 ? O07 5TX 501 A 1 
HETATM 8 O O08 5TX . . . C 2 -6.248 -0.701 -23.912 1 27.7 ? O08 5TX 501 A 1 
HETATM 9 C C09 5TX . . . C 2 -5.926 2.086 -22.524 1 40.8 ? C09 5TX 501 A 1 
HETATM 10 O O10 5TX . . . C 2 -8.819 1.14 -22.897 1 30.26 ? O10 5TX 501 A 1 
HETATM 11 N N12 5TX . . . C 2 -8.827 2.765 -24.468 1 30.14 ? N12 5TX 501 A 1 
HETATM 12 O O13 5TX . . . C 2 -8.322 4.89 -24.947 1 33.5 ? O13 5TX 501 A 1 
HETATM 13 O O11 5TX . . . C 2 -10.222 2.924 -24.547 1 26.95 ? O11 5TX 501 A 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           287 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           13 
#