data_5TKM
#
_model_server_result.job_id            ayffPOySIVBwK1aJoGwnsw 
_model_server_result.datetime_utc      '2025-08-31 12:14:41' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          5tkm 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    5TKM 
#
_exptl.entry_id    5TKM 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            5TKM 
_cell.length_a            60.739 
_cell.length_b            60.802 
_cell.length_c            111.515 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 5TKM 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A ND1 HIS 73 A HIS 66 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
metalc ? metalc2 A SG CYS 104 A CYS 97 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc3 A SG CYS 107 A CYS 100 1_555 C ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc4 C ZN ZN . A ZN 401 1_555 E O HOH . A HOH 526 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? 
metalc ? metalc5 B ND1 HIS 73 B HIS 66 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.957 ? 
metalc ? metalc6 B SG CYS 104 B CYS 97 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.269 ? 
metalc ? metalc7 B SG CYS 107 B CYS 100 1_555 D ZN ZN . B ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? 
metalc ? metalc8 D ZN ZN . B ZN 401 1_555 F O HOH . B HOH 524 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.142 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     5TKM 
_atom_sites.fract_transf_matrix[1][1]    0.016464 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016447 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008967 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 401 401 ZN ZN . 
D 2 ZN B 1 401 401 ZN ZN . 
E 3 HOH A 1 501 227 HOH HOH . 
E 3 HOH A 2 502 218 HOH HOH . 
E 3 HOH A 3 503 177 HOH HOH . 
E 3 HOH A 4 504 94 HOH HOH . 
E 3 HOH A 5 505 57 HOH HOH . 
E 3 HOH A 6 506 65 HOH HOH . 
E 3 HOH A 7 507 117 HOH HOH . 
E 3 HOH A 8 508 220 HOH HOH . 
E 3 HOH A 9 509 80 HOH HOH . 
E 3 HOH A 10 510 58 HOH HOH . 
E 3 HOH A 11 511 155 HOH HOH . 
E 3 HOH A 12 512 75 HOH HOH . 
E 3 HOH A 13 513 90 HOH HOH . 
E 3 HOH A 14 514 85 HOH HOH . 
E 3 HOH A 15 515 222 HOH HOH . 
E 3 HOH A 16 516 136 HOH HOH . 
E 3 HOH A 17 517 19 HOH HOH . 
E 3 HOH A 18 518 10 HOH HOH . 
E 3 HOH A 19 519 24 HOH HOH . 
E 3 HOH A 20 520 12 HOH HOH . 
E 3 HOH A 21 521 89 HOH HOH . 
E 3 HOH A 22 522 25 HOH HOH . 
E 3 HOH A 23 523 28 HOH HOH . 
E 3 HOH A 24 524 74 HOH HOH . 
E 3 HOH A 25 525 71 HOH HOH . 
E 3 HOH A 26 526 1 HOH HOH . 
E 3 HOH A 27 527 36 HOH HOH . 
E 3 HOH A 28 528 107 HOH HOH . 
E 3 HOH A 29 529 151 HOH HOH . 
E 3 HOH A 30 530 166 HOH HOH . 
E 3 HOH A 31 531 38 HOH HOH . 
E 3 HOH A 32 532 146 HOH HOH . 
E 3 HOH A 33 533 5 HOH HOH . 
E 3 HOH A 34 534 158 HOH HOH . 
E 3 HOH A 35 535 133 HOH HOH . 
E 3 HOH A 36 536 135 HOH HOH . 
E 3 HOH A 37 537 215 HOH HOH . 
E 3 HOH A 38 538 194 HOH HOH . 
E 3 HOH A 39 539 6 HOH HOH . 
E 3 HOH A 40 540 54 HOH HOH . 
E 3 HOH A 41 541 18 HOH HOH . 
E 3 HOH A 42 542 8 HOH HOH . 
E 3 HOH A 43 543 140 HOH HOH . 
E 3 HOH A 44 544 91 HOH HOH . 
E 3 HOH A 45 545 22 HOH HOH . 
E 3 HOH A 46 546 198 HOH HOH . 
E 3 HOH A 47 547 214 HOH HOH . 
E 3 HOH A 48 548 30 HOH HOH . 
E 3 HOH A 49 549 61 HOH HOH . 
E 3 HOH A 50 550 128 HOH HOH . 
E 3 HOH A 51 551 204 HOH HOH . 
E 3 HOH A 52 552 7 HOH HOH . 
E 3 HOH A 53 553 150 HOH HOH . 
E 3 HOH A 54 554 143 HOH HOH . 
E 3 HOH A 55 555 31 HOH HOH . 
E 3 HOH A 56 556 42 HOH HOH . 
E 3 HOH A 57 557 180 HOH HOH . 
E 3 HOH A 58 558 39 HOH HOH . 
E 3 HOH A 59 559 55 HOH HOH . 
E 3 HOH A 60 560 201 HOH HOH . 
E 3 HOH A 61 561 32 HOH HOH . 
E 3 HOH A 62 562 114 HOH HOH . 
E 3 HOH A 63 563 27 HOH HOH . 
E 3 HOH A 64 564 153 HOH HOH . 
E 3 HOH A 65 565 100 HOH HOH . 
E 3 HOH A 66 566 44 HOH HOH . 
E 3 HOH A 67 567 127 HOH HOH . 
E 3 HOH A 68 568 104 HOH HOH . 
E 3 HOH A 69 569 73 HOH HOH . 
E 3 HOH A 70 570 190 HOH HOH . 
E 3 HOH A 71 571 52 HOH HOH . 
E 3 HOH A 72 572 72 HOH HOH . 
E 3 HOH A 73 573 56 HOH HOH . 
E 3 HOH A 74 574 197 HOH HOH . 
E 3 HOH A 75 575 84 HOH HOH . 
E 3 HOH A 76 576 188 HOH HOH . 
E 3 HOH A 77 577 76 HOH HOH . 
E 3 HOH A 78 578 129 HOH HOH . 
E 3 HOH A 79 579 156 HOH HOH . 
E 3 HOH A 80 580 159 HOH HOH . 
E 3 HOH A 81 581 51 HOH HOH . 
E 3 HOH A 82 582 63 HOH HOH . 
E 3 HOH A 83 583 224 HOH HOH . 
E 3 HOH A 84 584 111 HOH HOH . 
E 3 HOH A 85 585 179 HOH HOH . 
E 3 HOH A 86 586 178 HOH HOH . 
E 3 HOH A 87 587 184 HOH HOH . 
E 3 HOH A 88 588 88 HOH HOH . 
E 3 HOH A 89 589 193 HOH HOH . 
E 3 HOH A 90 590 199 HOH HOH . 
E 3 HOH A 91 591 223 HOH HOH . 
E 3 HOH A 92 592 181 HOH HOH . 
E 3 HOH A 93 593 162 HOH HOH . 
E 3 HOH A 94 594 225 HOH HOH . 
E 3 HOH A 95 595 152 HOH HOH . 
E 3 HOH A 96 596 131 HOH HOH . 
E 3 HOH A 97 597 216 HOH HOH . 
E 3 HOH A 98 598 208 HOH HOH . 
E 3 HOH A 99 599 83 HOH HOH . 
E 3 HOH A 100 600 191 HOH HOH . 
E 3 HOH A 101 601 119 HOH HOH . 
E 3 HOH A 102 602 81 HOH HOH . 
E 3 HOH A 103 603 163 HOH HOH . 
E 3 HOH A 104 604 192 HOH HOH . 
E 3 HOH A 105 605 169 HOH HOH . 
E 3 HOH A 106 606 210 HOH HOH . 
E 3 HOH A 107 607 226 HOH HOH . 
E 3 HOH A 108 608 137 HOH HOH . 
E 3 HOH A 109 609 138 HOH HOH . 
E 3 HOH A 110 610 160 HOH HOH . 
E 3 HOH A 111 611 219 HOH HOH . 
E 3 HOH A 112 612 200 HOH HOH . 
E 3 HOH A 113 613 68 HOH HOH . 
E 3 HOH A 114 614 139 HOH HOH . 
E 3 HOH A 115 615 230 HOH HOH . 
E 3 HOH A 116 616 185 HOH HOH . 
F 3 HOH B 1 501 233 HOH HOH . 
F 3 HOH B 2 502 202 HOH HOH . 
F 3 HOH B 3 503 234 HOH HOH . 
F 3 HOH B 4 504 217 HOH HOH . 
F 3 HOH B 5 505 228 HOH HOH . 
F 3 HOH B 6 506 231 HOH HOH . 
F 3 HOH B 7 507 123 HOH HOH . 
F 3 HOH B 8 508 141 HOH HOH . 
F 3 HOH B 9 509 45 HOH HOH . 
F 3 HOH B 10 510 62 HOH HOH . 
F 3 HOH B 11 511 154 HOH HOH . 
F 3 HOH B 12 512 59 HOH HOH . 
F 3 HOH B 13 513 108 HOH HOH . 
F 3 HOH B 14 514 60 HOH HOH . 
F 3 HOH B 15 515 122 HOH HOH . 
F 3 HOH B 16 516 96 HOH HOH . 
F 3 HOH B 17 517 86 HOH HOH . 
F 3 HOH B 18 518 207 HOH HOH . 
F 3 HOH B 19 519 113 HOH HOH . 
F 3 HOH B 20 520 14 HOH HOH . 
F 3 HOH B 21 521 9 HOH HOH . 
F 3 HOH B 22 522 213 HOH HOH . 
F 3 HOH B 23 523 13 HOH HOH . 
F 3 HOH B 24 524 2 HOH HOH . 
F 3 HOH B 25 525 183 HOH HOH . 
F 3 HOH B 26 526 23 HOH HOH . 
F 3 HOH B 27 527 15 HOH HOH . 
F 3 HOH B 28 528 121 HOH HOH . 
F 3 HOH B 29 529 33 HOH HOH . 
F 3 HOH B 30 530 67 HOH HOH . 
F 3 HOH B 31 531 21 HOH HOH . 
F 3 HOH B 32 532 102 HOH HOH . 
F 3 HOH B 33 533 116 HOH HOH . 
F 3 HOH B 34 534 20 HOH HOH . 
F 3 HOH B 35 535 147 HOH HOH . 
F 3 HOH B 36 536 4 HOH HOH . 
F 3 HOH B 37 537 16 HOH HOH . 
F 3 HOH B 38 538 3 HOH HOH . 
F 3 HOH B 39 539 37 HOH HOH . 
F 3 HOH B 40 540 97 HOH HOH . 
F 3 HOH B 41 541 17 HOH HOH . 
F 3 HOH B 42 542 43 HOH HOH . 
F 3 HOH B 43 543 157 HOH HOH . 
F 3 HOH B 44 544 149 HOH HOH . 
F 3 HOH B 45 545 49 HOH HOH . 
F 3 HOH B 46 546 35 HOH HOH . 
F 3 HOH B 47 547 148 HOH HOH . 
F 3 HOH B 48 548 167 HOH HOH . 
F 3 HOH B 49 549 26 HOH HOH . 
F 3 HOH B 50 550 41 HOH HOH . 
F 3 HOH B 51 551 98 HOH HOH . 
F 3 HOH B 52 552 95 HOH HOH . 
F 3 HOH B 53 553 11 HOH HOH . 
F 3 HOH B 54 554 195 HOH HOH . 
F 3 HOH B 55 555 110 HOH HOH . 
F 3 HOH B 56 556 196 HOH HOH . 
F 3 HOH B 57 557 99 HOH HOH . 
F 3 HOH B 58 558 124 HOH HOH . 
F 3 HOH B 59 559 118 HOH HOH . 
F 3 HOH B 60 560 87 HOH HOH . 
F 3 HOH B 61 561 109 HOH HOH . 
F 3 HOH B 62 562 29 HOH HOH . 
F 3 HOH B 63 563 186 HOH HOH . 
F 3 HOH B 64 564 126 HOH HOH . 
F 3 HOH B 65 565 69 HOH HOH . 
F 3 HOH B 66 566 34 HOH HOH . 
F 3 HOH B 67 567 53 HOH HOH . 
F 3 HOH B 68 568 46 HOH HOH . 
F 3 HOH B 69 569 70 HOH HOH . 
F 3 HOH B 70 570 106 HOH HOH . 
F 3 HOH B 71 571 50 HOH HOH . 
F 3 HOH B 72 572 92 HOH HOH . 
F 3 HOH B 73 573 101 HOH HOH . 
F 3 HOH B 74 574 120 HOH HOH . 
F 3 HOH B 75 575 48 HOH HOH . 
F 3 HOH B 76 576 112 HOH HOH . 
F 3 HOH B 77 577 64 HOH HOH . 
F 3 HOH B 78 578 47 HOH HOH . 
F 3 HOH B 79 579 142 HOH HOH . 
F 3 HOH B 80 580 82 HOH HOH . 
F 3 HOH B 81 581 145 HOH HOH . 
F 3 HOH B 82 582 78 HOH HOH . 
F 3 HOH B 83 583 130 HOH HOH . 
F 3 HOH B 84 584 40 HOH HOH . 
F 3 HOH B 85 585 175 HOH HOH . 
F 3 HOH B 86 586 105 HOH HOH . 
F 3 HOH B 87 587 176 HOH HOH . 
F 3 HOH B 88 588 93 HOH HOH . 
F 3 HOH B 89 589 161 HOH HOH . 
F 3 HOH B 90 590 187 HOH HOH . 
F 3 HOH B 91 591 171 HOH HOH . 
F 3 HOH B 92 592 164 HOH HOH . 
F 3 HOH B 93 593 103 HOH HOH . 
F 3 HOH B 94 594 79 HOH HOH . 
F 3 HOH B 95 595 125 HOH HOH . 
F 3 HOH B 96 596 172 HOH HOH . 
F 3 HOH B 97 597 211 HOH HOH . 
F 3 HOH B 98 598 221 HOH HOH . 
F 3 HOH B 99 599 115 HOH HOH . 
F 3 HOH B 100 600 209 HOH HOH . 
F 3 HOH B 101 601 173 HOH HOH . 
F 3 HOH B 102 602 66 HOH HOH . 
F 3 HOH B 103 603 232 HOH HOH . 
F 3 HOH B 104 604 170 HOH HOH . 
F 3 HOH B 105 605 168 HOH HOH . 
F 3 HOH B 106 606 182 HOH HOH . 
F 3 HOH B 107 607 144 HOH HOH . 
F 3 HOH B 108 608 212 HOH HOH . 
F 3 HOH B 109 609 132 HOH HOH . 
F 3 HOH B 110 610 206 HOH HOH . 
F 3 HOH B 111 611 165 HOH HOH . 
F 3 HOH B 112 612 205 HOH HOH . 
F 3 HOH B 113 613 203 HOH HOH . 
F 3 HOH B 114 614 77 HOH HOH . 
F 3 HOH B 115 615 229 HOH HOH . 
F 3 HOH B 116 616 134 HOH HOH . 
F 3 HOH B 117 617 174 HOH HOH . 
F 3 HOH B 118 618 189 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -32.855 
_atom_site.Cartn_y               45.818 
_atom_site.Cartn_z               1.912 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        24.43 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           373 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#