data_5TLD # _model_server_result.job_id 46Tyu0mKy9opN8WyXcFTGQ _model_server_result.datetime_utc '2024-11-25 11:33:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tld # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TLD # _exptl.entry_id 5TLD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 347.493 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-17-phenylazanyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.77 _cell.angle_gamma 90 _cell.entry_id 5TLD _cell.length_a 54.65 _cell.length_b 82.14 _cell.length_c 58.35 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TLD _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C24 H29 N O' _chem_comp.formula_weight 347.493 _chem_comp.id 6WV _chem_comp.mon_nstd_flag . _chem_comp.name (8~{R},9~{S},13~{S},14~{S},17~{S})-13-methyl-17-phenylazanyl-6,7,8,9,11,12,14,15,16,17-decahydrocyclopenta[a]phenanthren-3-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C09 6WV sing 1 n n C08 C09 6WV doub 2 n y C08 C07 6WV sing 3 n y C09 C10 6WV sing 4 n y C07 C06 6WV doub 5 n y C10 C11 6WV doub 6 n y C06 C11 6WV sing 7 n y C06 C05 6WV sing 8 n n C11 C12 6WV sing 9 n n C12 C13 6WV sing 10 n n C05 C04 6WV sing 11 n n C05 C14 6WV sing 12 n n C04 C03 6WV sing 13 n n C13 C14 6WV sing 14 n n C03 C02 6WV sing 15 n n C14 C15 6WV sing 16 n n C15 C02 6WV sing 17 n n C15 C16 6WV sing 18 n n C02 C01 6WV sing 19 n n C02 C18 6WV sing 20 n n C18 N01 6WV sing 21 n n C18 C17 6WV sing 22 n n C16 C17 6WV sing 23 n n N01 C19 6WV sing 24 n n C19 C20 6WV doub 25 n y C19 C24 6WV sing 26 n y C20 C21 6WV sing 27 n y C24 C23 6WV doub 28 n y C21 C22 6WV doub 29 n y C23 C22 6WV sing 30 n y C01 H01 6WV sing 31 n n C01 H03 6WV sing 32 n n C01 H02 6WV sing 33 n n C03 H05 6WV sing 34 n n C03 H04 6WV sing 35 n n C04 H06 6WV sing 36 n n C04 H07 6WV sing 37 n n C05 H08 6WV sing 38 n n C07 H09 6WV sing 39 n n C08 H10 6WV sing 40 n n O01 H11 6WV sing 41 n n C10 H12 6WV sing 42 n n C12 H14 6WV sing 43 n n C12 H13 6WV sing 44 n n C13 H15 6WV sing 45 n n C13 H16 6WV sing 46 n n C14 H17 6WV sing 47 n n C15 H18 6WV sing 48 n n C16 H20 6WV sing 49 n n C16 H19 6WV sing 50 n n C17 H21 6WV sing 51 n n C17 H22 6WV sing 52 n n C18 H23 6WV sing 53 n n N01 H24 6WV sing 54 n n C20 H25 6WV sing 55 n n C21 H26 6WV sing 56 n n C22 H27 6WV sing 57 n n C23 H28 6WV sing 58 n n C24 H29 6WV sing 59 n n # _atom_sites.entry_id 5TLD _atom_sites.fract_transf_matrix[1][1] 0.018298 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00694 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012174 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018329 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 6WV A 1 601 1 6WV 6WV . F 3 6WV B 1 601 1 6WV 6WV . G 4 HOH A 1 701 15 HOH HOH . G 4 HOH A 2 702 84 HOH HOH . G 4 HOH A 3 703 43 HOH HOH . G 4 HOH A 4 704 8 HOH HOH . G 4 HOH A 5 705 20 HOH HOH . G 4 HOH A 6 706 37 HOH HOH . G 4 HOH A 7 707 47 HOH HOH . G 4 HOH A 8 708 25 HOH HOH . G 4 HOH A 9 709 21 HOH HOH . G 4 HOH A 10 710 4 HOH HOH . G 4 HOH A 11 711 12 HOH HOH . G 4 HOH A 12 712 10 HOH HOH . G 4 HOH A 13 713 62 HOH HOH . G 4 HOH A 14 714 7 HOH HOH . G 4 HOH A 15 715 89 HOH HOH . G 4 HOH A 16 716 106 HOH HOH . G 4 HOH A 17 717 40 HOH HOH . G 4 HOH A 18 718 73 HOH HOH . G 4 HOH A 19 719 11 HOH HOH . G 4 HOH A 20 720 48 HOH HOH . G 4 HOH A 21 721 5 HOH HOH . G 4 HOH A 22 722 56 HOH HOH . G 4 HOH A 23 723 36 HOH HOH . G 4 HOH A 24 724 44 HOH HOH . G 4 HOH A 25 725 60 HOH HOH . G 4 HOH A 26 726 78 HOH HOH . G 4 HOH A 27 727 98 HOH HOH . G 4 HOH A 28 728 22 HOH HOH . G 4 HOH A 29 729 19 HOH HOH . G 4 HOH A 30 730 13 HOH HOH . G 4 HOH A 31 731 55 HOH HOH . G 4 HOH A 32 732 108 HOH HOH . G 4 HOH A 33 733 86 HOH HOH . G 4 HOH A 34 734 70 HOH HOH . G 4 HOH A 35 735 42 HOH HOH . G 4 HOH A 36 736 75 HOH HOH . G 4 HOH A 37 737 72 HOH HOH . G 4 HOH A 38 738 85 HOH HOH . G 4 HOH A 39 739 110 HOH HOH . G 4 HOH A 40 740 96 HOH HOH . G 4 HOH A 41 741 107 HOH HOH . G 4 HOH A 42 742 50 HOH HOH . G 4 HOH A 43 743 17 HOH HOH . G 4 HOH A 44 744 105 HOH HOH . G 4 HOH A 45 745 65 HOH HOH . H 4 HOH B 1 701 100 HOH HOH . H 4 HOH B 2 702 41 HOH HOH . H 4 HOH B 3 703 83 HOH HOH . H 4 HOH B 4 704 16 HOH HOH . H 4 HOH B 5 705 31 HOH HOH . H 4 HOH B 6 706 54 HOH HOH . H 4 HOH B 7 707 3 HOH HOH . H 4 HOH B 8 708 97 HOH HOH . H 4 HOH B 9 709 14 HOH HOH . H 4 HOH B 10 710 9 HOH HOH . H 4 HOH B 11 711 24 HOH HOH . H 4 HOH B 12 712 103 HOH HOH . H 4 HOH B 13 713 29 HOH HOH . H 4 HOH B 14 714 58 HOH HOH . H 4 HOH B 15 715 38 HOH HOH . H 4 HOH B 16 716 27 HOH HOH . H 4 HOH B 17 717 77 HOH HOH . H 4 HOH B 18 718 94 HOH HOH . H 4 HOH B 19 719 93 HOH HOH . H 4 HOH B 20 720 64 HOH HOH . H 4 HOH B 21 721 30 HOH HOH . H 4 HOH B 22 722 1 HOH HOH . H 4 HOH B 23 723 6 HOH HOH . H 4 HOH B 24 724 32 HOH HOH . H 4 HOH B 25 725 90 HOH HOH . H 4 HOH B 26 726 92 HOH HOH . H 4 HOH B 27 727 79 HOH HOH . H 4 HOH B 28 728 2 HOH HOH . H 4 HOH B 29 729 67 HOH HOH . H 4 HOH B 30 730 99 HOH HOH . H 4 HOH B 31 731 39 HOH HOH . H 4 HOH B 32 732 68 HOH HOH . H 4 HOH B 33 733 26 HOH HOH . H 4 HOH B 34 734 46 HOH HOH . H 4 HOH B 35 735 18 HOH HOH . H 4 HOH B 36 736 35 HOH HOH . H 4 HOH B 37 737 87 HOH HOH . H 4 HOH B 38 738 74 HOH HOH . H 4 HOH B 39 739 52 HOH HOH . H 4 HOH B 40 740 28 HOH HOH . H 4 HOH B 41 741 57 HOH HOH . H 4 HOH B 42 742 71 HOH HOH . H 4 HOH B 43 743 102 HOH HOH . H 4 HOH B 44 744 82 HOH HOH . H 4 HOH B 45 745 61 HOH HOH . H 4 HOH B 46 746 91 HOH HOH . H 4 HOH B 47 747 109 HOH HOH . H 4 HOH B 48 748 51 HOH HOH . H 4 HOH B 49 749 63 HOH HOH . H 4 HOH B 50 750 69 HOH HOH . H 4 HOH B 51 751 33 HOH HOH . H 4 HOH B 52 752 88 HOH HOH . H 4 HOH B 53 753 66 HOH HOH . H 4 HOH B 54 754 45 HOH HOH . H 4 HOH B 55 755 95 HOH HOH . H 4 HOH B 56 756 80 HOH HOH . H 4 HOH B 57 757 53 HOH HOH . H 4 HOH B 58 758 49 HOH HOH . H 4 HOH B 59 759 59 HOH HOH . I 4 HOH C 1 701 34 HOH HOH . I 4 HOH C 2 702 81 HOH HOH . I 4 HOH C 3 703 104 HOH HOH . I 4 HOH C 4 704 101 HOH HOH . J 4 HOH D 1 701 76 HOH HOH . J 4 HOH D 2 702 23 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 6WV . . . E 3 20.438 -1.631 7.443 1 39.76 ? C01 6WV 601 A 1 HETATM 2 C C02 6WV . . . E 3 19.929 -2.959 6.869 1 39.86 ? C02 6WV 601 A 1 HETATM 3 C C03 6WV . . . E 3 20.595 -3.207 5.511 1 39.12 ? C03 6WV 601 A 1 HETATM 4 C C04 6WV . . . E 3 20.052 -2.202 4.497 1 36.58 ? C04 6WV 601 A 1 HETATM 5 C C05 6WV . . . E 3 18.566 -2.524 4.273 1 35.04 ? C05 6WV 601 A 1 HETATM 6 C C06 6WV . . . E 3 17.928 -1.996 3.136 1 32.93 ? C06 6WV 601 A 1 HETATM 7 C C07 6WV . . . E 3 18.677 -1.74 2.001 1 30.88 ? C07 6WV 601 A 1 HETATM 8 C C08 6WV . . . E 3 18.059 -1.225 0.88 1 28.43 ? C08 6WV 601 A 1 HETATM 9 C C09 6WV . . . E 3 16.706 -0.958 0.871 1 28.28 ? C09 6WV 601 A 1 HETATM 10 O O01 6WV . . . E 3 16.171 -0.465 -0.235 1 28.14 ? O01 6WV 601 A 1 HETATM 11 C C10 6WV . . . E 3 15.933 -1.196 1.969 1 29.75 ? C10 6WV 601 A 1 HETATM 12 C C11 6WV . . . E 3 16.544 -1.722 3.118 1 32.17 ? C11 6WV 601 A 1 HETATM 13 C C12 6WV . . . E 3 15.719 -1.953 4.226 1 33.57 ? C12 6WV 601 A 1 HETATM 14 C C13 6WV . . . E 3 16.357 -2.718 5.396 1 34.23 ? C13 6WV 601 A 1 HETATM 15 C C14 6WV . . . E 3 17.804 -2.321 5.581 1 35.77 ? C14 6WV 601 A 1 HETATM 16 C C15 6WV . . . E 3 18.445 -3.191 6.637 1 38.43 ? C15 6WV 601 A 1 HETATM 17 C C16 6WV . . . E 3 17.916 -2.966 8.007 1 40.41 ? C16 6WV 601 A 1 HETATM 18 C C17 6WV . . . E 3 18.759 -3.994 8.695 1 41.24 ? C17 6WV 601 A 1 HETATM 19 C C18 6WV . . . E 3 20.066 -4.04 7.914 1 41.4 ? C18 6WV 601 A 1 HETATM 20 N N01 6WV . . . E 3 21.346 -4.156 8.634 1 42.34 ? N01 6WV 601 A 1 HETATM 21 C C19 6WV . . . E 3 21.771 -5.139 9.444 1 44.78 ? C19 6WV 601 A 1 HETATM 22 C C20 6WV . . . E 3 23.099 -5.025 9.895 1 45.84 ? C20 6WV 601 A 1 HETATM 23 C C21 6WV . . . E 3 23.626 -6.005 10.741 1 46.33 ? C21 6WV 601 A 1 HETATM 24 C C22 6WV . . . E 3 22.832 -7.101 11.142 1 46.13 ? C22 6WV 601 A 1 HETATM 25 C C23 6WV . . . E 3 21.521 -7.237 10.714 1 46.05 ? C23 6WV 601 A 1 HETATM 26 C C24 6WV . . . E 3 21.009 -6.256 9.87 1 45.81 ? C24 6WV 601 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #