data_5TM1 # _model_server_result.job_id LYUWq7oh9xjSBpqzw6Kw7g _model_server_result.datetime_utc '2024-11-25 12:21:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tm1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TM1 # _exptl.entry_id 5TM1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 320.311 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,5-bis(2-fluoro-4-hydroxyphenyl)-1H-1lambda~4~-thiophen-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.84 _cell.angle_gamma 90 _cell.entry_id 5TM1 _cell.length_a 55.98 _cell.length_b 83.04 _cell.length_c 59 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TM1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C16 H10 F2 O3 S' _chem_comp.formula_weight 320.311 _chem_comp.id 7EQ _chem_comp.mon_nstd_flag . _chem_comp.name 2,5-bis(2-fluoro-4-hydroxyphenyl)-1H-1lambda~4~-thiophen-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 7EQ sing 1 n n C02 C06 7EQ doub 2 n y C02 C03 7EQ sing 3 n y C06 C07 7EQ sing 4 n y C03 C04 7EQ doub 5 n y C07 C08 7EQ doub 6 n y C04 C08 7EQ sing 7 n y C04 F05 7EQ sing 8 n n C08 C09 7EQ sing 9 n n C09 S13 7EQ sing 10 n n C09 C10 7EQ doub 11 n n O14 S13 7EQ doub 12 n n S13 C12 7EQ sing 13 n n C10 C11 7EQ sing 14 n n C12 C11 7EQ doub 15 n n C12 C15 7EQ sing 16 n n C22 C15 7EQ doub 17 n y C22 C21 7EQ sing 18 n y C15 C16 7EQ sing 19 n y C21 C19 7EQ doub 20 n y C16 F17 7EQ sing 21 n n C16 C18 7EQ doub 22 n y C19 C18 7EQ sing 23 n y C19 O20 7EQ sing 24 n n O01 H1 7EQ sing 25 n n C03 H2 7EQ sing 26 n n C06 H3 7EQ sing 27 n n C07 H4 7EQ sing 28 n n C10 H5 7EQ sing 29 n n C11 H6 7EQ sing 30 n n C18 H7 7EQ sing 31 n n O20 H8 7EQ sing 32 n n C21 H9 7EQ sing 33 n n C22 H10 7EQ sing 34 n n # _atom_sites.entry_id 5TM1 _atom_sites.fract_transf_matrix[1][1] 0.017864 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0068 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012042 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018136 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7EQ A 1 601 1 7EQ UNK . F 3 7EQ B 1 601 2 7EQ UNK . G 4 HOH A 1 701 87 HOH HOH . G 4 HOH A 2 702 111 HOH HOH . G 4 HOH A 3 703 78 HOH HOH . G 4 HOH A 4 704 88 HOH HOH . G 4 HOH A 5 705 97 HOH HOH . G 4 HOH A 6 706 89 HOH HOH . G 4 HOH A 7 707 15 HOH HOH . G 4 HOH A 8 708 53 HOH HOH . G 4 HOH A 9 709 67 HOH HOH . G 4 HOH A 10 710 29 HOH HOH . G 4 HOH A 11 711 124 HOH HOH . G 4 HOH A 12 712 27 HOH HOH . G 4 HOH A 13 713 24 HOH HOH . G 4 HOH A 14 714 112 HOH HOH . G 4 HOH A 15 715 19 HOH HOH . G 4 HOH A 16 716 17 HOH HOH . G 4 HOH A 17 717 28 HOH HOH . G 4 HOH A 18 718 104 HOH HOH . G 4 HOH A 19 719 38 HOH HOH . G 4 HOH A 20 720 69 HOH HOH . G 4 HOH A 21 721 36 HOH HOH . G 4 HOH A 22 722 30 HOH HOH . G 4 HOH A 23 723 11 HOH HOH . G 4 HOH A 24 724 61 HOH HOH . G 4 HOH A 25 725 50 HOH HOH . G 4 HOH A 26 726 117 HOH HOH . G 4 HOH A 27 727 68 HOH HOH . G 4 HOH A 28 728 79 HOH HOH . G 4 HOH A 29 729 7 HOH HOH . G 4 HOH A 30 730 14 HOH HOH . G 4 HOH A 31 731 35 HOH HOH . G 4 HOH A 32 732 6 HOH HOH . G 4 HOH A 33 733 66 HOH HOH . G 4 HOH A 34 734 71 HOH HOH . G 4 HOH A 35 735 33 HOH HOH . G 4 HOH A 36 736 21 HOH HOH . G 4 HOH A 37 737 16 HOH HOH . G 4 HOH A 38 738 63 HOH HOH . G 4 HOH A 39 739 55 HOH HOH . G 4 HOH A 40 740 51 HOH HOH . G 4 HOH A 41 741 60 HOH HOH . G 4 HOH A 42 742 107 HOH HOH . G 4 HOH A 43 743 1 HOH HOH . G 4 HOH A 44 744 9 HOH HOH . G 4 HOH A 45 745 83 HOH HOH . G 4 HOH A 46 746 120 HOH HOH . G 4 HOH A 47 747 95 HOH HOH . G 4 HOH A 48 748 39 HOH HOH . G 4 HOH A 49 749 123 HOH HOH . G 4 HOH A 50 750 100 HOH HOH . G 4 HOH A 51 751 118 HOH HOH . G 4 HOH A 52 752 96 HOH HOH . G 4 HOH A 53 753 74 HOH HOH . G 4 HOH A 54 754 44 HOH HOH . G 4 HOH A 55 755 109 HOH HOH . G 4 HOH A 56 756 114 HOH HOH . G 4 HOH A 57 757 22 HOH HOH . G 4 HOH A 58 758 108 HOH HOH . H 4 HOH B 1 701 126 HOH HOH . H 4 HOH B 2 702 62 HOH HOH . H 4 HOH B 3 703 76 HOH HOH . H 4 HOH B 4 704 42 HOH HOH . H 4 HOH B 5 705 34 HOH HOH . H 4 HOH B 6 706 57 HOH HOH . H 4 HOH B 7 707 45 HOH HOH . H 4 HOH B 8 708 56 HOH HOH . H 4 HOH B 9 709 8 HOH HOH . H 4 HOH B 10 710 127 HOH HOH . H 4 HOH B 11 711 5 HOH HOH . H 4 HOH B 12 712 103 HOH HOH . H 4 HOH B 13 713 115 HOH HOH . H 4 HOH B 14 714 32 HOH HOH . H 4 HOH B 15 715 2 HOH HOH . H 4 HOH B 16 716 58 HOH HOH . H 4 HOH B 17 717 26 HOH HOH . H 4 HOH B 18 718 122 HOH HOH . H 4 HOH B 19 719 3 HOH HOH . H 4 HOH B 20 720 10 HOH HOH . H 4 HOH B 21 721 70 HOH HOH . H 4 HOH B 22 722 37 HOH HOH . H 4 HOH B 23 723 25 HOH HOH . H 4 HOH B 24 724 23 HOH HOH . H 4 HOH B 25 725 12 HOH HOH . H 4 HOH B 26 726 13 HOH HOH . H 4 HOH B 27 727 31 HOH HOH . H 4 HOH B 28 728 125 HOH HOH . H 4 HOH B 29 729 105 HOH HOH . H 4 HOH B 30 730 73 HOH HOH . H 4 HOH B 31 731 41 HOH HOH . H 4 HOH B 32 732 106 HOH HOH . H 4 HOH B 33 733 49 HOH HOH . H 4 HOH B 34 734 47 HOH HOH . H 4 HOH B 35 735 64 HOH HOH . H 4 HOH B 36 736 82 HOH HOH . H 4 HOH B 37 737 54 HOH HOH . H 4 HOH B 38 738 77 HOH HOH . H 4 HOH B 39 739 65 HOH HOH . H 4 HOH B 40 740 116 HOH HOH . H 4 HOH B 41 741 48 HOH HOH . H 4 HOH B 42 742 4 HOH HOH . H 4 HOH B 43 743 90 HOH HOH . H 4 HOH B 44 744 99 HOH HOH . H 4 HOH B 45 745 59 HOH HOH . H 4 HOH B 46 746 75 HOH HOH . H 4 HOH B 47 747 72 HOH HOH . H 4 HOH B 48 748 86 HOH HOH . H 4 HOH B 49 749 93 HOH HOH . H 4 HOH B 50 750 43 HOH HOH . H 4 HOH B 51 751 92 HOH HOH . H 4 HOH B 52 752 113 HOH HOH . H 4 HOH B 53 753 52 HOH HOH . H 4 HOH B 54 754 80 HOH HOH . H 4 HOH B 55 755 40 HOH HOH . H 4 HOH B 56 756 81 HOH HOH . H 4 HOH B 57 757 121 HOH HOH . H 4 HOH B 58 758 18 HOH HOH . I 4 HOH C 1 701 102 HOH HOH . I 4 HOH C 2 702 84 HOH HOH . I 4 HOH C 3 703 85 HOH HOH . J 4 HOH D 1 701 101 HOH HOH . J 4 HOH D 2 702 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7EQ . . . F 3 17.495 3.507 32.537 1 72.74 ? O01 7EQ 601 B 1 HETATM 2 C C02 7EQ . . . F 3 16.247 4.102 32.507 1 70.5 ? C02 7EQ 601 B 1 HETATM 3 C C03 7EQ . . . F 3 15.734 4.512 31.309 1 68.2 ? C03 7EQ 601 B 1 HETATM 4 C C04 7EQ . . . F 3 14.517 5.104 31.276 1 65.74 ? C04 7EQ 601 B 1 HETATM 5 F F05 7EQ . . . F 3 13.999 5.511 30.163 1 64.56 ? F05 7EQ 601 B 1 HETATM 6 C C06 7EQ . . . F 3 15.556 4.281 33.665 1 69.79 ? C06 7EQ 601 B 1 HETATM 7 C C07 7EQ . . . F 3 14.33 4.878 33.614 1 69.68 ? C07 7EQ 601 B 1 HETATM 8 C C08 7EQ . . . F 3 13.834 5.309 32.413 1 66.83 ? C08 7EQ 601 B 1 HETATM 9 C C09 7EQ . . . F 3 12.495 5.932 32.313 1 63.34 ? C09 7EQ 601 B 1 HETATM 10 C C10 7EQ . . . F 3 11.925 6.822 31.203 1 31.4 ? C10 7EQ 601 B 1 HETATM 11 C C11 7EQ . . . F 3 10.367 7.154 31.62 1 38.38 ? C11 7EQ 601 B 1 HETATM 12 C C12 7EQ . . . F 3 10.039 6.484 32.963 1 46.25 ? C12 7EQ 601 B 1 HETATM 13 S S13 7EQ . . . F 3 11.368 5.691 33.404 1 70.68 ? S13 7EQ 601 B 1 HETATM 14 O O14 7EQ . . . F 3 11.552 4.934 34.547 1 76.23 ? O14 7EQ 601 B 1 HETATM 15 C C15 7EQ . . . F 3 8.747 6.502 33.698 1 38.6 ? C15 7EQ 601 B 1 HETATM 16 C C16 7EQ . . . F 3 7.658 6.99 33.079 1 41.54 ? C16 7EQ 601 B 1 HETATM 17 F F17 7EQ . . . F 3 7.748 7.487 31.889 1 55.06 ? F17 7EQ 601 B 1 HETATM 18 C C18 7EQ . . . F 3 6.453 7.02 33.674 1 39.06 ? C18 7EQ 601 B 1 HETATM 19 C C19 7EQ . . . F 3 6.334 6.511 34.91 1 41.11 ? C19 7EQ 601 B 1 HETATM 20 O O20 7EQ . . . F 3 5.094 6.534 35.504 1 50.54 ? O20 7EQ 601 B 1 HETATM 21 C C21 7EQ . . . F 3 7.417 5.984 35.552 1 32.8 ? C21 7EQ 601 B 1 HETATM 22 C C22 7EQ . . . F 3 8.626 5.969 34.939 1 33.72 ? C22 7EQ 601 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 22 #