data_5TM2 # _model_server_result.job_id KV1xxPpp3zBe1Ece6QsyOQ _model_server_result.datetime_utc '2024-11-21 20:33:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tm2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TM2 # _exptl.entry_id 5TM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 353.22 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,5-bis(2-chloro-4-hydroxyphenyl)-1H-1lambda~4~-thiophen-1-one _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.92 _cell.angle_gamma 90 _cell.entry_id 5TM2 _cell.length_a 54.97 _cell.length_b 82.17 _cell.length_c 58.79 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C16 H10 Cl2 O3 S' _chem_comp.formula_weight 353.22 _chem_comp.id 7EO _chem_comp.mon_nstd_flag . _chem_comp.name 2,5-bis(2-chloro-4-hydroxyphenyl)-1H-1lambda~4~-thiophen-1-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O20 C19 7EO sing 1 n n C21 C19 7EO doub 2 n y C21 C22 7EO sing 3 n y C19 C18 7EO sing 4 n y C22 C15 7EO doub 5 n y C18 C16 7EO doub 6 n y C15 C16 7EO sing 7 n y C15 C12 7EO sing 8 n n C16 CL17 7EO sing 9 n n C12 C11 7EO doub 10 n n C12 S13 7EO sing 11 n n C11 C10 7EO sing 12 n n S13 O14 7EO doub 13 n n S13 C09 7EO sing 14 n n C10 C09 7EO doub 15 n n C09 C08 7EO sing 16 n n C07 C08 7EO doub 17 n y C07 C06 7EO sing 18 n y C08 C04 7EO sing 19 n y C06 C02 7EO doub 20 n y C04 CL05 7EO sing 21 n n C04 C03 7EO doub 22 n y C02 C03 7EO sing 23 n y C02 O01 7EO sing 24 n n O01 H1 7EO sing 25 n n C03 H2 7EO sing 26 n n C06 H3 7EO sing 27 n n C07 H4 7EO sing 28 n n C10 H5 7EO sing 29 n n C11 H6 7EO sing 30 n n C18 H7 7EO sing 31 n n O20 H8 7EO sing 32 n n C21 H9 7EO sing 33 n n C22 H10 7EO sing 34 n n # _atom_sites.entry_id 5TM2 _atom_sites.fract_transf_matrix[1][1] 0.018192 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006954 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7EO A 1 601 2 7EO UNK . F 3 7EO B 1 601 3 7EO UNK . G 4 HOH A 1 701 29 HOH HOH . G 4 HOH A 2 702 8 HOH HOH . G 4 HOH A 3 703 39 HOH HOH . G 4 HOH A 4 704 2 HOH HOH . G 4 HOH A 5 705 5 HOH HOH . G 4 HOH A 6 706 7 HOH HOH . G 4 HOH A 7 707 57 HOH HOH . G 4 HOH A 8 708 1 HOH HOH . G 4 HOH A 9 709 25 HOH HOH . G 4 HOH A 10 710 38 HOH HOH . G 4 HOH A 11 711 10 HOH HOH . G 4 HOH A 12 712 34 HOH HOH . G 4 HOH A 13 713 26 HOH HOH . G 4 HOH A 14 714 15 HOH HOH . G 4 HOH A 15 715 16 HOH HOH . G 4 HOH A 16 716 56 HOH HOH . G 4 HOH A 17 717 41 HOH HOH . G 4 HOH A 18 718 23 HOH HOH . G 4 HOH A 19 719 19 HOH HOH . G 4 HOH A 20 720 59 HOH HOH . G 4 HOH A 21 721 47 HOH HOH . G 4 HOH A 22 722 55 HOH HOH . G 4 HOH A 23 723 27 HOH HOH . G 4 HOH A 24 724 37 HOH HOH . G 4 HOH A 25 725 46 HOH HOH . G 4 HOH A 26 726 14 HOH HOH . G 4 HOH A 27 727 58 HOH HOH . G 4 HOH A 28 728 43 HOH HOH . G 4 HOH A 29 729 21 HOH HOH . H 4 HOH B 1 701 45 HOH HOH . H 4 HOH B 2 702 24 HOH HOH . H 4 HOH B 3 703 6 HOH HOH . H 4 HOH B 4 704 50 HOH HOH . H 4 HOH B 5 705 9 HOH HOH . H 4 HOH B 6 706 42 HOH HOH . H 4 HOH B 7 707 11 HOH HOH . H 4 HOH B 8 708 17 HOH HOH . H 4 HOH B 9 709 31 HOH HOH . H 4 HOH B 10 710 4 HOH HOH . H 4 HOH B 11 711 3 HOH HOH . H 4 HOH B 12 712 40 HOH HOH . H 4 HOH B 13 713 33 HOH HOH . H 4 HOH B 14 714 48 HOH HOH . H 4 HOH B 15 715 35 HOH HOH . H 4 HOH B 16 716 36 HOH HOH . H 4 HOH B 17 717 30 HOH HOH . H 4 HOH B 18 718 32 HOH HOH . H 4 HOH B 19 719 22 HOH HOH . H 4 HOH B 20 720 18 HOH HOH . H 4 HOH B 21 721 51 HOH HOH . H 4 HOH B 22 722 28 HOH HOH . H 4 HOH B 23 723 53 HOH HOH . H 4 HOH B 24 724 52 HOH HOH . H 4 HOH B 25 725 44 HOH HOH . H 4 HOH B 26 726 12 HOH HOH . I 4 HOH C 1 701 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C08 7EO . . . F 3 14.102 5.9 32.184 1 71.82 ? C08 7EO 601 B 1 HETATM 2 C C09 7EO . . . F 3 12.808 5.552 32.878 1 71.53 ? C09 7EO 601 B 1 HETATM 3 C C10 7EO . . . F 3 12.534 4.294 33.736 1 68.62 ? C10 7EO 601 B 1 HETATM 4 C C11 7EO . . . F 3 10.98 4.375 34.279 1 64.43 ? C11 7EO 601 B 1 HETATM 5 C C12 7EO . . . F 3 10.33 5.682 33.761 1 61.9 ? C12 7EO 601 B 1 HETATM 6 S S13 7EO . . . F 3 11.45 6.423 32.87 1 70.64 ? S13 7EO 601 B 1 HETATM 7 O O14 7EO . . . F 3 11.287 7.641 32.212 1 72.46 ? O14 7EO 601 B 1 HETATM 8 C C15 7EO . . . F 3 8.905 6.075 34.024 1 49.89 ? C15 7EO 601 B 1 HETATM 9 C C16 7EO . . . F 3 8.107 6.577 33.031 1 47.01 ? C16 7EO 601 B 1 HETATM 10 CL CL17 7EO . . . F 3 8.691 6.842 31.464 1 45.03 ? CL17 7EO 601 B 1 HETATM 11 C C18 7EO . . . F 3 6.814 6.894 33.284 1 42.14 ? C18 7EO 601 B 1 HETATM 12 C C19 7EO . . . F 3 6.322 6.687 34.515 1 40.1 ? C19 7EO 601 B 1 HETATM 13 O O20 7EO . . . F 3 5.022 6.978 34.803 1 40.82 ? O20 7EO 601 B 1 HETATM 14 C C21 7EO . . . F 3 7.095 6.173 35.488 1 38.71 ? C21 7EO 601 B 1 HETATM 15 C C22 7EO . . . F 3 8.386 5.876 35.254 1 39.98 ? C22 7EO 601 B 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 15 #