data_5TM8 # _model_server_result.job_id u_wHb98eAHMdLbCrkDhAKQ _model_server_result.datetime_utc '2024-10-12 11:12:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tm8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TM8 # _exptl.entry_id 5TM8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 643.542 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '7-{4-[(1S,4S,6R)-6-[(4-bromophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenoxy}heptanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.09 _cell.angle_gamma 90 _cell.entry_id 5TM8 _cell.length_a 56.444 _cell.length_b 82.511 _cell.length_c 59.029 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TM8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C31 H31 Br O8 S' _chem_comp.formula_weight 643.542 _chem_comp.id 7K6 _chem_comp.mon_nstd_flag . _chem_comp.name '7-{4-[(1S,4S,6R)-6-[(4-bromophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenoxy}heptanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O05 C16 7K6 doub 1 n n C16 C09 7K6 sing 2 n n C16 O04 7K6 sing 3 n n C09 C08 7K6 sing 4 n n C06 C07 7K6 sing 5 n n C06 C05 7K6 sing 6 n n C08 C07 7K6 sing 7 n n C04 C05 7K6 sing 8 n n C04 O02 7K6 sing 9 n n C25 C26 7K6 doub 10 n y C25 C24 7K6 sing 11 n y O02 C29 7K6 sing 12 n n C28 C29 7K6 doub 13 n y C28 C27 7K6 sing 14 n y C26 C20 7K6 sing 15 n y O01 C24 7K6 sing 16 n n C29 C30 7K6 sing 17 n y C27 C21 7K6 doub 18 n y C24 C23 7K6 doub 19 n y C30 C31 7K6 doub 20 n y C21 C31 7K6 sing 21 n y C21 C18 7K6 sing 22 n n C20 C01 7K6 sing 23 n n C20 C22 7K6 doub 24 n y C18 C01 7K6 doub 25 n n C18 C19 7K6 sing 26 n n C01 C02 7K6 sing 27 n n C23 C22 7K6 sing 28 n y O08 C19 7K6 sing 29 n n O08 C02 7K6 sing 30 n n C19 C17 7K6 sing 31 n n C02 C03 7K6 sing 32 n n C12 C11 7K6 doub 33 n y C12 C13 7K6 sing 34 n y C11 C10 7K6 sing 35 n y C17 C03 7K6 sing 36 n n C17 S01 7K6 sing 37 n n BR1 C13 7K6 sing 38 n n C13 C14 7K6 doub 39 n y C10 O03 7K6 sing 40 n n C10 C15 7K6 doub 41 n y O03 S01 7K6 sing 42 n n O06 S01 7K6 doub 43 n n S01 O07 7K6 doub 44 n n C14 C15 7K6 sing 45 n y C02 H1 7K6 sing 46 n n C03 H2 7K6 sing 47 n n C03 H3 7K6 sing 48 n n C04 H4 7K6 sing 49 n n C04 H5 7K6 sing 50 n n C05 H6 7K6 sing 51 n n C05 H7 7K6 sing 52 n n C06 H8 7K6 sing 53 n n C06 H9 7K6 sing 54 n n C07 H10 7K6 sing 55 n n C07 H11 7K6 sing 56 n n C08 H12 7K6 sing 57 n n C08 H13 7K6 sing 58 n n C09 H14 7K6 sing 59 n n C09 H15 7K6 sing 60 n n C11 H16 7K6 sing 61 n n C12 H17 7K6 sing 62 n n C14 H18 7K6 sing 63 n n C15 H19 7K6 sing 64 n n O04 H20 7K6 sing 65 n n C17 H21 7K6 sing 66 n n C19 H22 7K6 sing 67 n n C22 H23 7K6 sing 68 n n C23 H24 7K6 sing 69 n n C25 H25 7K6 sing 70 n n C26 H26 7K6 sing 71 n n C27 H27 7K6 sing 72 n n C28 H28 7K6 sing 73 n n C30 H29 7K6 sing 74 n n C31 H30 7K6 sing 75 n n O01 H31 7K6 sing 76 n n # _atom_sites.entry_id 5TM8 _atom_sites.fract_transf_matrix[1][1] 0.017717 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006834 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018158 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7K6 A 1 601 601 7K6 7K6 . F 3 7K6 B 1 601 601 7K6 7K6 . G 4 HOH A 1 701 701 HOH HOH . G 4 HOH A 2 702 702 HOH HOH . G 4 HOH A 3 703 703 HOH HOH . G 4 HOH A 4 704 704 HOH HOH . G 4 HOH A 5 705 705 HOH HOH . G 4 HOH A 6 706 706 HOH HOH . G 4 HOH A 7 707 707 HOH HOH . G 4 HOH A 8 708 708 HOH HOH . G 4 HOH A 9 709 709 HOH HOH . G 4 HOH A 10 710 710 HOH HOH . G 4 HOH A 11 711 711 HOH HOH . G 4 HOH A 12 712 712 HOH HOH . G 4 HOH A 13 713 713 HOH HOH . G 4 HOH A 14 714 714 HOH HOH . G 4 HOH A 15 715 715 HOH HOH . G 4 HOH A 16 716 716 HOH HOH . G 4 HOH A 17 717 717 HOH HOH . G 4 HOH A 18 718 718 HOH HOH . G 4 HOH A 19 719 719 HOH HOH . G 4 HOH A 20 720 720 HOH HOH . G 4 HOH A 21 721 721 HOH HOH . G 4 HOH A 22 722 722 HOH HOH . G 4 HOH A 23 723 723 HOH HOH . G 4 HOH A 24 724 724 HOH HOH . G 4 HOH A 25 725 725 HOH HOH . G 4 HOH A 26 726 726 HOH HOH . G 4 HOH A 27 727 727 HOH HOH . G 4 HOH A 28 728 728 HOH HOH . G 4 HOH A 29 729 729 HOH HOH . G 4 HOH A 30 730 730 HOH HOH . G 4 HOH A 31 731 731 HOH HOH . G 4 HOH A 32 732 732 HOH HOH . G 4 HOH A 33 733 733 HOH HOH . G 4 HOH A 34 734 734 HOH HOH . G 4 HOH A 35 735 735 HOH HOH . G 4 HOH A 36 736 736 HOH HOH . G 4 HOH A 37 737 737 HOH HOH . G 4 HOH A 38 738 738 HOH HOH . G 4 HOH A 39 739 739 HOH HOH . G 4 HOH A 40 740 740 HOH HOH . G 4 HOH A 41 741 741 HOH HOH . G 4 HOH A 42 742 742 HOH HOH . G 4 HOH A 43 743 743 HOH HOH . G 4 HOH A 44 744 744 HOH HOH . G 4 HOH A 45 745 745 HOH HOH . G 4 HOH A 46 746 746 HOH HOH . G 4 HOH A 47 747 747 HOH HOH . G 4 HOH A 48 748 748 HOH HOH . G 4 HOH A 49 749 749 HOH HOH . G 4 HOH A 50 750 750 HOH HOH . G 4 HOH A 51 751 751 HOH HOH . G 4 HOH A 52 752 752 HOH HOH . G 4 HOH A 53 753 753 HOH HOH . G 4 HOH A 54 754 754 HOH HOH . G 4 HOH A 55 755 755 HOH HOH . G 4 HOH A 56 756 756 HOH HOH . G 4 HOH A 57 757 757 HOH HOH . G 4 HOH A 58 758 758 HOH HOH . G 4 HOH A 59 759 759 HOH HOH . G 4 HOH A 60 760 760 HOH HOH . G 4 HOH A 61 761 761 HOH HOH . G 4 HOH A 62 762 762 HOH HOH . G 4 HOH A 63 763 763 HOH HOH . G 4 HOH A 64 764 764 HOH HOH . G 4 HOH A 65 765 765 HOH HOH . G 4 HOH A 66 766 766 HOH HOH . G 4 HOH A 67 767 767 HOH HOH . G 4 HOH A 68 768 768 HOH HOH . G 4 HOH A 69 769 769 HOH HOH . G 4 HOH A 70 770 770 HOH HOH . G 4 HOH A 71 771 771 HOH HOH . G 4 HOH A 72 772 772 HOH HOH . G 4 HOH A 73 773 773 HOH HOH . G 4 HOH A 74 774 774 HOH HOH . G 4 HOH A 75 775 775 HOH HOH . G 4 HOH A 76 776 776 HOH HOH . G 4 HOH A 77 777 777 HOH HOH . G 4 HOH A 78 778 778 HOH HOH . G 4 HOH A 79 779 779 HOH HOH . G 4 HOH A 80 780 780 HOH HOH . G 4 HOH A 81 781 781 HOH HOH . G 4 HOH A 82 782 782 HOH HOH . G 4 HOH A 83 783 783 HOH HOH . G 4 HOH A 84 784 784 HOH HOH . G 4 HOH A 85 785 785 HOH HOH . G 4 HOH A 86 786 786 HOH HOH . G 4 HOH A 87 787 787 HOH HOH . H 4 HOH B 1 701 701 HOH HOH . H 4 HOH B 2 702 702 HOH HOH . H 4 HOH B 3 703 703 HOH HOH . H 4 HOH B 4 704 704 HOH HOH . H 4 HOH B 5 705 705 HOH HOH . H 4 HOH B 6 706 706 HOH HOH . H 4 HOH B 7 707 707 HOH HOH . H 4 HOH B 8 708 708 HOH HOH . H 4 HOH B 9 709 709 HOH HOH . H 4 HOH B 10 710 710 HOH HOH . H 4 HOH B 11 711 711 HOH HOH . H 4 HOH B 12 712 712 HOH HOH . H 4 HOH B 13 713 713 HOH HOH . H 4 HOH B 14 714 714 HOH HOH . H 4 HOH B 15 715 715 HOH HOH . H 4 HOH B 16 716 716 HOH HOH . H 4 HOH B 17 717 717 HOH HOH . H 4 HOH B 18 718 718 HOH HOH . H 4 HOH B 19 719 719 HOH HOH . H 4 HOH B 20 720 720 HOH HOH . H 4 HOH B 21 721 721 HOH HOH . H 4 HOH B 22 722 722 HOH HOH . H 4 HOH B 23 723 723 HOH HOH . H 4 HOH B 24 724 724 HOH HOH . H 4 HOH B 25 725 725 HOH HOH . H 4 HOH B 26 726 726 HOH HOH . H 4 HOH B 27 727 727 HOH HOH . H 4 HOH B 28 728 728 HOH HOH . H 4 HOH B 29 729 729 HOH HOH . H 4 HOH B 30 730 730 HOH HOH . H 4 HOH B 31 731 731 HOH HOH . H 4 HOH B 32 732 732 HOH HOH . H 4 HOH B 33 733 733 HOH HOH . H 4 HOH B 34 734 734 HOH HOH . H 4 HOH B 35 735 735 HOH HOH . H 4 HOH B 36 736 736 HOH HOH . H 4 HOH B 37 737 737 HOH HOH . H 4 HOH B 38 738 738 HOH HOH . H 4 HOH B 39 739 739 HOH HOH . H 4 HOH B 40 740 740 HOH HOH . H 4 HOH B 41 741 741 HOH HOH . H 4 HOH B 42 742 742 HOH HOH . H 4 HOH B 43 743 743 HOH HOH . H 4 HOH B 44 744 744 HOH HOH . H 4 HOH B 45 745 745 HOH HOH . H 4 HOH B 46 746 746 HOH HOH . H 4 HOH B 47 747 747 HOH HOH . H 4 HOH B 48 748 748 HOH HOH . H 4 HOH B 49 749 749 HOH HOH . H 4 HOH B 50 750 750 HOH HOH . H 4 HOH B 51 751 751 HOH HOH . H 4 HOH B 52 752 752 HOH HOH . H 4 HOH B 53 753 753 HOH HOH . H 4 HOH B 54 754 754 HOH HOH . H 4 HOH B 55 755 755 HOH HOH . H 4 HOH B 56 756 756 HOH HOH . H 4 HOH B 57 757 757 HOH HOH . H 4 HOH B 58 758 758 HOH HOH . H 4 HOH B 59 759 759 HOH HOH . H 4 HOH B 60 760 760 HOH HOH . H 4 HOH B 61 761 761 HOH HOH . H 4 HOH B 62 762 762 HOH HOH . H 4 HOH B 63 763 763 HOH HOH . H 4 HOH B 64 764 764 HOH HOH . H 4 HOH B 65 765 765 HOH HOH . H 4 HOH B 66 766 766 HOH HOH . H 4 HOH B 67 767 767 HOH HOH . H 4 HOH B 68 768 768 HOH HOH . H 4 HOH B 69 769 769 HOH HOH . H 4 HOH B 70 770 770 HOH HOH . H 4 HOH B 71 771 771 HOH HOH . H 4 HOH B 72 772 772 HOH HOH . H 4 HOH B 73 773 773 HOH HOH . H 4 HOH B 74 774 774 HOH HOH . H 4 HOH B 75 775 775 HOH HOH . H 4 HOH B 76 776 776 HOH HOH . H 4 HOH B 77 777 777 HOH HOH . H 4 HOH B 78 778 778 HOH HOH . H 4 HOH B 79 779 779 HOH HOH . H 4 HOH B 80 780 780 HOH HOH . H 4 HOH B 81 781 781 HOH HOH . H 4 HOH B 82 782 782 HOH HOH . H 4 HOH B 83 783 783 HOH HOH . H 4 HOH B 84 784 784 HOH HOH . H 4 HOH B 85 785 785 HOH HOH . H 4 HOH B 86 786 786 HOH HOH . H 4 HOH B 87 787 787 HOH HOH . H 4 HOH B 88 788 788 HOH HOH . H 4 HOH B 89 789 789 HOH HOH . H 4 HOH B 90 790 790 HOH HOH . I 4 HOH C 1 701 701 HOH HOH . I 4 HOH C 2 702 702 HOH HOH . J 4 HOH D 1 701 701 HOH HOH . J 4 HOH D 2 702 702 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7K6 . . . F 3 -21.999 -4.254 78.405 0.81 32.68 ? C01 7K6 601 B 1 HETATM 2 C C02 7K6 . . . F 3 -21.09 -5.302 77.744 0.81 34.03 ? C02 7K6 601 B 1 HETATM 3 C C03 7K6 . . . F 3 -20.57 -4.677 76.439 0.81 35.76 ? C03 7K6 601 B 1 HETATM 4 C C04 7K6 . . . F 3 -28.875 -2.192 76.336 0.81 51.38 ? C04 7K6 601 B 1 HETATM 5 C C05 7K6 . . . F 3 -29.866 -1.159 75.793 0.81 56.51 ? C05 7K6 601 B 1 HETATM 6 C C06 7K6 . . . F 3 -31.006 -1.846 75.022 0.81 60.6 ? C06 7K6 601 B 1 HETATM 7 C C07 7K6 . . . F 3 -31.721 -0.897 74.043 0.81 62.59 ? C07 7K6 601 B 1 HETATM 8 C C08 7K6 . . . F 3 -33.109 -1.422 73.64 0.81 62.43 ? C08 7K6 601 B 1 HETATM 9 C C10 7K6 . . . F 3 -24.085 -6.412 72.842 0.81 53.2 ? C10 7K6 601 B 1 HETATM 10 C C11 7K6 . . . F 3 -25.301 -6.851 73.219 0.81 55.59 ? C11 7K6 601 B 1 HETATM 11 C C12 7K6 . . . F 3 -25.94 -7.838 72.577 0.81 55.85 ? C12 7K6 601 B 1 HETATM 12 C C13 7K6 . . . F 3 -25.36 -8.408 71.513 0.81 58.4 ? C13 7K6 601 B 1 HETATM 13 C C14 7K6 . . . F 3 -24.151 -7.996 71.107 0.81 55.42 ? C14 7K6 601 B 1 HETATM 14 C C15 7K6 . . . F 3 -23.533 -6.999 71.759 0.81 56.01 ? C15 7K6 601 B 1 HETATM 15 BR BR1 7K6 . . . F 3 -26.248 -9.798 70.59 0.81 63.64 ? BR1 7K6 601 B 1 HETATM 16 S S01 7K6 . . . F 3 -21.899 -5.475 74.062 0.81 44.8 ? S01 7K6 601 B 1 HETATM 17 O O06 7K6 . . . F 3 -21.827 -6.93 74.194 0.81 44.08 ? O06 7K6 601 B 1 HETATM 18 O O07 7K6 . . . F 3 -21.259 -4.762 72.967 0.81 47.91 ? O07 7K6 601 B 1 HETATM 19 C C17 7K6 . . . F 3 -21.885 -4.627 75.619 0.81 37.95 ? C17 7K6 601 B 1 HETATM 20 C C18 7K6 . . . F 3 -23.13 -4.289 77.677 0.81 35.97 ? C18 7K6 601 B 1 HETATM 21 C C19 7K6 . . . F 3 -22.832 -5.335 76.597 0.81 35.55 ? C19 7K6 601 B 1 HETATM 22 O O08 7K6 . . . F 3 -21.963 -6.259 77.202 0.81 37.4 ? O08 7K6 601 B 1 HETATM 23 C C20 7K6 . . . F 3 -21.598 -3.535 79.474 0.81 33.86 ? C20 7K6 601 B 1 HETATM 24 C C21 7K6 . . . F 3 -24.29 -3.597 77.607 0.81 36.77 ? C21 7K6 601 B 1 HETATM 25 C C22 7K6 . . . F 3 -20.319 -3.12 79.543 0.81 32.99 ? C22 7K6 601 B 1 HETATM 26 C C23 7K6 . . . F 3 -19.861 -2.408 80.575 0.81 32.37 ? C23 7K6 601 B 1 HETATM 27 C C24 7K6 . . . F 3 -20.665 -2.089 81.61 0.81 34.25 ? C24 7K6 601 B 1 HETATM 28 C C25 7K6 . . . F 3 -21.943 -2.5 81.562 0.81 34.8 ? C25 7K6 601 B 1 HETATM 29 C C26 7K6 . . . F 3 -22.395 -3.214 80.514 0.81 32.08 ? C26 7K6 601 B 1 HETATM 30 C C27 7K6 . . . F 3 -25.462 -4.203 77.317 0.81 38.19 ? C27 7K6 601 B 1 HETATM 31 C C28 7K6 . . . F 3 -26.601 -3.514 77.176 0.81 36.65 ? C28 7K6 601 B 1 HETATM 32 C C29 7K6 . . . F 3 -26.658 -2.174 77.268 0.81 37.27 ? C29 7K6 601 B 1 HETATM 33 C C30 7K6 . . . F 3 -25.482 -1.563 77.519 0.81 32.47 ? C30 7K6 601 B 1 HETATM 34 C C31 7K6 . . . F 3 -24.341 -2.254 77.667 0.81 31.16 ? C31 7K6 601 B 1 HETATM 35 O O03 7K6 . . . F 3 -23.49 -5.384 73.526 0.81 47.37 ? O03 7K6 601 B 1 HETATM 36 O O01 7K6 . . . F 3 -20.194 -1.375 82.658 0.81 35.04 ? O01 7K6 601 B 1 HETATM 37 O O02 7K6 . . . F 3 -27.876 -1.554 77.091 0.81 44.84 ? O02 7K6 601 B 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 316 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 37 #