data_5TM9 # _model_server_result.job_id ju2z6taZKhTMulxJru7kXQ _model_server_result.datetime_utc '2024-10-12 11:17:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tm9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TM9 # _exptl.entry_id 5TM9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 524.969 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '3-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}prop-2-enoic acid' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.17 _cell.angle_gamma 90 _cell.entry_id 5TM9 _cell.length_a 58.879 _cell.length_b 81.985 _cell.length_c 61.799 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TM9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C27 H21 Cl O7 S' _chem_comp.formula_weight 524.969 _chem_comp.id 7KL _chem_comp.mon_nstd_flag . _chem_comp.name '3-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}prop-2-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C21 O03 7KL sing 1 n n O03 S01 7KL sing 2 n n C17 C18 7KL doub 3 n y C17 C16 7KL sing 4 n y C18 C08 7KL sing 5 n y C19 C16 7KL sing 6 n n O06 S01 7KL doub 7 n n C16 C15 7KL doub 8 n y S01 O07 7KL doub 9 n n S01 C04 7KL sing 10 n n C06 O01 7KL sing 11 n n C06 C05 7KL sing 12 n n C06 C04 7KL sing 13 n n O01 C02 7KL sing 14 n n C08 C05 7KL sing 15 n n C08 C14 7KL doub 16 n y C05 C01 7KL doub 17 n n C04 C03 7KL sing 18 n n C15 C14 7KL sing 19 n y C02 C01 7KL sing 20 n n C02 C03 7KL sing 21 n n C01 C07 7KL sing 22 n n C13 C07 7KL doub 23 n y C13 C12 7KL sing 24 n y C07 C09 7KL sing 25 n y C12 C11 7KL doub 26 n y C09 C10 7KL doub 27 n y C11 C10 7KL sing 28 n y C11 O02 7KL sing 29 n n C19 H1 7KL sing 30 n n C17 H4 7KL sing 31 n n C18 H5 7KL sing 32 n n C15 H6 7KL sing 33 n n C14 H7 7KL sing 34 n n O02 H10 7KL sing 35 n n C12 H11 7KL sing 36 n n C13 H12 7KL sing 37 n n C02 H13 7KL sing 38 n n C03 H14 7KL sing 39 n n C03 H15 7KL sing 40 n n C06 H16 7KL sing 41 n n C04 H17 7KL sing 42 n n C19 C1 7KL doub 43 n n C1 C2 7KL sing 44 n n C2 O1 7KL doub 45 n n C2 O2 7KL sing 46 n n C1 H2 7KL sing 47 n n O2 H22 7KL sing 48 n n C21 C3 7KL sing 49 n y C3 C4 7KL doub 50 n y C4 C5 7KL sing 51 n y C5 C6 7KL doub 52 n y C6 C7 7KL sing 53 n y C7 C21 7KL doub 54 n y C6 CL1 7KL sing 55 n n C09 H8 7KL sing 56 n n C10 H9 7KL sing 57 n n C3 H3 7KL sing 58 n n C4 H18 7KL sing 59 n n C5 H19 7KL sing 60 n n C7 H20 7KL sing 61 n n # _atom_sites.entry_id 5TM9 _atom_sites.fract_transf_matrix[1][1] 0.016984 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008346 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012197 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01803 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7KL A 1 601 1 7KL UNK . F 3 7KL A 1 602 1 7KL UNK . G 3 7KL A 1 603 1 7KL UNK . H 3 7KL A 1 604 1 7KL UNK . I 3 7KL B 1 601 1 7KL UNK . J 4 HOH A 1 701 74 HOH HOH . J 4 HOH A 2 702 76 HOH HOH . J 4 HOH A 3 703 23 HOH HOH . J 4 HOH A 4 704 39 HOH HOH . J 4 HOH A 5 705 65 HOH HOH . J 4 HOH A 6 706 13 HOH HOH . J 4 HOH A 7 707 84 HOH HOH . J 4 HOH A 8 708 80 HOH HOH . J 4 HOH A 9 709 21 HOH HOH . J 4 HOH A 10 710 42 HOH HOH . J 4 HOH A 11 711 37 HOH HOH . J 4 HOH A 12 712 15 HOH HOH . J 4 HOH A 13 713 5 HOH HOH . J 4 HOH A 14 714 33 HOH HOH . J 4 HOH A 15 715 43 HOH HOH . J 4 HOH A 16 716 12 HOH HOH . J 4 HOH A 17 717 78 HOH HOH . J 4 HOH A 18 718 20 HOH HOH . J 4 HOH A 19 719 1 HOH HOH . J 4 HOH A 20 720 61 HOH HOH . J 4 HOH A 21 721 16 HOH HOH . J 4 HOH A 22 722 11 HOH HOH . J 4 HOH A 23 723 71 HOH HOH . J 4 HOH A 24 724 17 HOH HOH . J 4 HOH A 25 725 9 HOH HOH . J 4 HOH A 26 726 119 HOH HOH . J 4 HOH A 27 727 8 HOH HOH . J 4 HOH A 28 728 60 HOH HOH . J 4 HOH A 29 729 103 HOH HOH . J 4 HOH A 30 730 50 HOH HOH . J 4 HOH A 31 731 35 HOH HOH . J 4 HOH A 32 732 54 HOH HOH . J 4 HOH A 33 733 115 HOH HOH . J 4 HOH A 34 734 77 HOH HOH . J 4 HOH A 35 735 56 HOH HOH . J 4 HOH A 36 736 40 HOH HOH . J 4 HOH A 37 737 30 HOH HOH . J 4 HOH A 38 738 112 HOH HOH . J 4 HOH A 39 739 122 HOH HOH . J 4 HOH A 40 740 45 HOH HOH . J 4 HOH A 41 741 106 HOH HOH . J 4 HOH A 42 742 64 HOH HOH . J 4 HOH A 43 743 49 HOH HOH . J 4 HOH A 44 744 96 HOH HOH . J 4 HOH A 45 745 108 HOH HOH . J 4 HOH A 46 746 120 HOH HOH . J 4 HOH A 47 747 59 HOH HOH . J 4 HOH A 48 748 124 HOH HOH . J 4 HOH A 49 749 95 HOH HOH . J 4 HOH A 50 750 58 HOH HOH . J 4 HOH A 51 751 121 HOH HOH . J 4 HOH A 52 752 26 HOH HOH . J 4 HOH A 53 753 79 HOH HOH . J 4 HOH A 54 754 53 HOH HOH . J 4 HOH A 55 755 46 HOH HOH . J 4 HOH A 56 756 48 HOH HOH . J 4 HOH A 57 757 92 HOH HOH . J 4 HOH A 58 758 90 HOH HOH . J 4 HOH A 59 759 51 HOH HOH . K 4 HOH B 1 701 10 HOH HOH . K 4 HOH B 2 702 111 HOH HOH . K 4 HOH B 3 703 36 HOH HOH . K 4 HOH B 4 704 70 HOH HOH . K 4 HOH B 5 705 113 HOH HOH . K 4 HOH B 6 706 6 HOH HOH . K 4 HOH B 7 707 32 HOH HOH . K 4 HOH B 8 708 69 HOH HOH . K 4 HOH B 9 709 19 HOH HOH . K 4 HOH B 10 710 114 HOH HOH . K 4 HOH B 11 711 2 HOH HOH . K 4 HOH B 12 712 86 HOH HOH . K 4 HOH B 13 713 67 HOH HOH . K 4 HOH B 14 714 47 HOH HOH . K 4 HOH B 15 715 62 HOH HOH . K 4 HOH B 16 716 89 HOH HOH . K 4 HOH B 17 717 4 HOH HOH . K 4 HOH B 18 718 28 HOH HOH . K 4 HOH B 19 719 7 HOH HOH . K 4 HOH B 20 720 25 HOH HOH . K 4 HOH B 21 721 55 HOH HOH . K 4 HOH B 22 722 29 HOH HOH . K 4 HOH B 23 723 34 HOH HOH . K 4 HOH B 24 724 22 HOH HOH . K 4 HOH B 25 725 63 HOH HOH . K 4 HOH B 26 726 27 HOH HOH . K 4 HOH B 27 727 38 HOH HOH . K 4 HOH B 28 728 44 HOH HOH . K 4 HOH B 29 729 18 HOH HOH . K 4 HOH B 30 730 66 HOH HOH . K 4 HOH B 31 731 3 HOH HOH . K 4 HOH B 32 732 126 HOH HOH . K 4 HOH B 33 733 83 HOH HOH . K 4 HOH B 34 734 82 HOH HOH . K 4 HOH B 35 735 81 HOH HOH . K 4 HOH B 36 736 116 HOH HOH . K 4 HOH B 37 737 99 HOH HOH . K 4 HOH B 38 738 14 HOH HOH . K 4 HOH B 39 739 24 HOH HOH . K 4 HOH B 40 740 31 HOH HOH . K 4 HOH B 41 741 72 HOH HOH . K 4 HOH B 42 742 102 HOH HOH . K 4 HOH B 43 743 107 HOH HOH . K 4 HOH B 44 744 97 HOH HOH . K 4 HOH B 45 745 52 HOH HOH . K 4 HOH B 46 746 68 HOH HOH . K 4 HOH B 47 747 125 HOH HOH . K 4 HOH B 48 748 104 HOH HOH . K 4 HOH B 49 749 101 HOH HOH . K 4 HOH B 50 750 87 HOH HOH . K 4 HOH B 51 751 118 HOH HOH . K 4 HOH B 52 752 91 HOH HOH . K 4 HOH B 53 753 110 HOH HOH . K 4 HOH B 54 754 93 HOH HOH . K 4 HOH B 55 755 85 HOH HOH . K 4 HOH B 56 756 41 HOH HOH . K 4 HOH B 57 757 100 HOH HOH . K 4 HOH B 58 758 57 HOH HOH . K 4 HOH B 59 759 123 HOH HOH . K 4 HOH B 60 760 73 HOH HOH . K 4 HOH B 61 761 98 HOH HOH . K 4 HOH B 62 762 105 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C19 7KL . . . E 3 16.848 1.069 2.756 0.89 39.66 ? C19 7KL 601 A 1 HETATM 2 C C16 7KL . . . E 3 17.255 -0.2 3.113 0.89 40.25 ? C16 7KL 601 A 1 HETATM 3 C C17 7KL . . . E 3 17.209 -1.227 2.202 0.89 40.73 ? C17 7KL 601 A 1 HETATM 4 C C18 7KL . . . E 3 17.629 -2.471 2.608 0.89 41.23 ? C18 7KL 601 A 1 HETATM 5 C C15 7KL . . . E 3 17.705 -0.425 4.386 0.89 36.68 ? C15 7KL 601 A 1 HETATM 6 C C14 7KL . . . E 3 18.117 -1.67 4.775 0.89 37.76 ? C14 7KL 601 A 1 HETATM 7 C C08 7KL . . . E 3 18.053 -2.709 3.888 0.89 40.7 ? C08 7KL 601 A 1 HETATM 8 C C05 7KL . . . E 3 18.489 -3.914 4.222 0.89 44.43 ? C05 7KL 601 A 1 HETATM 9 C C01 7KL . . . E 3 18.189 -4.769 5.215 0.89 43.09 ? C01 7KL 601 A 1 HETATM 10 C C07 7KL . . . E 3 17.31 -4.688 6.198 0.89 37.28 ? C07 7KL 601 A 1 HETATM 11 C C09 7KL . . . E 3 17.649 -5.252 7.397 0.89 36.52 ? C09 7KL 601 A 1 HETATM 12 C C10 7KL . . . E 3 16.804 -5.228 8.467 0.89 36.32 ? C10 7KL 601 A 1 HETATM 13 C C11 7KL . . . E 3 15.609 -4.623 8.345 0.89 32.52 ? C11 7KL 601 A 1 HETATM 14 O O02 7KL . . . E 3 14.838 -4.612 9.414 0.89 32.95 ? O02 7KL 601 A 1 HETATM 15 C C12 7KL . . . E 3 15.247 -4.047 7.153 0.89 29.33 ? C12 7KL 601 A 1 HETATM 16 C C13 7KL . . . E 3 16.09 -4.075 6.072 0.89 34.08 ? C13 7KL 601 A 1 HETATM 17 C C02 7KL . . . E 3 19.099 -5.83 5.02 0.89 45.35 ? C02 7KL 601 A 1 HETATM 18 C C03 7KL . . . E 3 20.561 -5.501 5.324 0.89 47.15 ? C03 7KL 601 A 1 HETATM 19 O O01 7KL . . . E 3 19.261 -5.822 3.659 0.89 45.3 ? O01 7KL 601 A 1 HETATM 20 C C06 7KL . . . E 3 19.533 -4.481 3.514 0.89 47.42 ? C06 7KL 601 A 1 HETATM 21 C C04 7KL . . . E 3 20.809 -4.365 4.311 0.89 52.28 ? C04 7KL 601 A 1 HETATM 22 S S01 7KL . . . E 3 22.265 -4.64 3.125 0.89 62.36 ? S01 7KL 601 A 1 HETATM 23 O O06 7KL . . . E 3 22.308 -6.067 2.772 0.89 62.99 ? O06 7KL 601 A 1 HETATM 24 O O07 7KL . . . E 3 23.487 -4.266 3.86 0.89 63.71 ? O07 7KL 601 A 1 HETATM 25 O O03 7KL . . . E 3 22.078 -3.759 1.935 0.89 62.96 ? O03 7KL 601 A 1 HETATM 26 C C21 7KL . . . E 3 22.634 -4.253 0.8 0.89 61.55 ? C21 7KL 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 32 _model_server_stats.element_count 26 #