data_5TML # _model_server_result.job_id LWmiO_pXgHTJrqQwWsnCvg _model_server_result.datetime_utc '2024-10-12 11:19:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TML # _exptl.entry_id 5TML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 567.049 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.33 _cell.angle_gamma 90 _cell.entry_id 5TML _cell.length_a 56.152 _cell.length_b 82.246 _cell.length_c 58.882 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TML _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C30 H27 Cl O7 S' _chem_comp.formula_weight 567.049 _chem_comp.id 7E1 _chem_comp.mon_nstd_flag . _chem_comp.name '6-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(E)-6-(4-((1R,4S,6R)-6-((3-chlorophenoxy)sulfonyl)-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl)phenyl)hex-5-enoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C03 7E1 sing 1 n n C03 C04 7E1 doub 2 n y C03 C02 7E1 sing 3 n y C04 C05 7E1 sing 4 n y C02 C01 7E1 doub 5 n y C05 C29 7E1 doub 6 n y C01 C29 7E1 sing 7 n y C29 C23 7E1 sing 8 n n C23 C27 7E1 doub 9 n n C23 C24 7E1 sing 10 n n C27 C30 7E1 sing 11 n n C27 C28 7E1 sing 12 n n C10 C30 7E1 doub 13 n y C10 C09 7E1 sing 14 n y C30 C06 7E1 sing 15 n y C24 O07 7E1 sing 16 n n C24 C25 7E1 sing 17 n n C09 C08 7E1 doub 18 n y C06 C07 7E1 doub 19 n y C08 C07 7E1 sing 20 n y C08 C11 7E1 sing 21 n n O07 C28 7E1 sing 22 n n C28 C26 7E1 sing 23 n n C25 C26 7E1 sing 24 n n C26 S01 7E1 sing 25 n n O05 S01 7E1 doub 26 n n S01 O02 7E1 sing 27 n n S01 O06 7E1 doub 28 n n O02 C13 7E1 sing 29 n n C13 C14 7E1 doub 30 n y C13 C18 7E1 sing 31 n y C14 C15 7E1 sing 32 n y C18 C17 7E1 doub 33 n y C15 CL1 7E1 sing 34 n n C15 C16 7E1 doub 35 n y C17 C16 7E1 sing 36 n y C01 H1 7E1 sing 37 n n C02 H2 7E1 sing 38 n n C04 H3 7E1 sing 39 n n C05 H4 7E1 sing 40 n n C07 H5 7E1 sing 41 n n C09 H6 7E1 sing 42 n n O01 H7 7E1 sing 43 n n C11 H8 7E1 sing 44 n n C14 H11 7E1 sing 45 n n C16 H12 7E1 sing 46 n n C17 H13 7E1 sing 47 n n C18 H14 7E1 sing 48 n n C24 H16 7E1 sing 49 n n C25 H17 7E1 sing 50 n n C25 H18 7E1 sing 51 n n C26 H19 7E1 sing 52 n n C28 H21 7E1 sing 53 n n C06 H22 7E1 sing 54 n n C10 H23 7E1 sing 55 n n C11 C1 7E1 doub 56 n n C1 C2 7E1 sing 57 n n C2 C3 7E1 sing 58 n n C3 C4 7E1 sing 59 n n C4 C5 7E1 sing 60 n n C5 O1 7E1 sing 61 n n C5 O2 7E1 doub 62 n n C1 H9 7E1 sing 63 n n C2 H10 7E1 sing 64 n n C2 H24 7E1 sing 65 n n C3 H25 7E1 sing 66 n n C3 H26 7E1 sing 67 n n C4 H27 7E1 sing 68 n n C4 H28 7E1 sing 69 n n O1 H29 7E1 sing 70 n n # _atom_sites.entry_id 5TML _atom_sites.fract_transf_matrix[1][1] 0.017809 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006954 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012159 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7E1 A 1 601 1 7E1 UNK . F 3 7E1 B 1 601 2 7E1 UNK . G 4 HOH A 1 701 59 HOH HOH . G 4 HOH A 2 702 24 HOH HOH . G 4 HOH A 3 703 23 HOH HOH . G 4 HOH A 4 704 7 HOH HOH . G 4 HOH A 5 705 43 HOH HOH . G 4 HOH A 6 706 13 HOH HOH . G 4 HOH A 7 707 57 HOH HOH . G 4 HOH A 8 708 1 HOH HOH . G 4 HOH A 9 709 14 HOH HOH . G 4 HOH A 10 710 20 HOH HOH . G 4 HOH A 11 711 47 HOH HOH . G 4 HOH A 12 712 37 HOH HOH . G 4 HOH A 13 713 56 HOH HOH . G 4 HOH A 14 714 42 HOH HOH . G 4 HOH A 15 715 22 HOH HOH . G 4 HOH A 16 716 15 HOH HOH . G 4 HOH A 17 717 50 HOH HOH . G 4 HOH A 18 718 52 HOH HOH . G 4 HOH A 19 719 39 HOH HOH . G 4 HOH A 20 720 35 HOH HOH . G 4 HOH A 21 721 3 HOH HOH . G 4 HOH A 22 722 8 HOH HOH . G 4 HOH A 23 723 19 HOH HOH . G 4 HOH A 24 724 68 HOH HOH . G 4 HOH A 25 725 40 HOH HOH . G 4 HOH A 26 726 18 HOH HOH . G 4 HOH A 27 727 41 HOH HOH . G 4 HOH A 28 728 29 HOH HOH . G 4 HOH A 29 729 61 HOH HOH . G 4 HOH A 30 730 45 HOH HOH . G 4 HOH A 31 731 66 HOH HOH . G 4 HOH A 32 732 64 HOH HOH . G 4 HOH A 33 733 38 HOH HOH . H 4 HOH B 1 701 28 HOH HOH . H 4 HOH B 2 702 44 HOH HOH . H 4 HOH B 3 703 25 HOH HOH . H 4 HOH B 4 704 49 HOH HOH . H 4 HOH B 5 705 63 HOH HOH . H 4 HOH B 6 706 4 HOH HOH . H 4 HOH B 7 707 30 HOH HOH . H 4 HOH B 8 708 9 HOH HOH . H 4 HOH B 9 709 60 HOH HOH . H 4 HOH B 10 710 6 HOH HOH . H 4 HOH B 11 711 2 HOH HOH . H 4 HOH B 12 712 62 HOH HOH . H 4 HOH B 13 713 27 HOH HOH . H 4 HOH B 14 714 16 HOH HOH . H 4 HOH B 15 715 33 HOH HOH . H 4 HOH B 16 716 26 HOH HOH . H 4 HOH B 17 717 36 HOH HOH . H 4 HOH B 18 718 10 HOH HOH . H 4 HOH B 19 719 5 HOH HOH . H 4 HOH B 20 720 65 HOH HOH . H 4 HOH B 21 721 21 HOH HOH . H 4 HOH B 22 722 53 HOH HOH . H 4 HOH B 23 723 46 HOH HOH . H 4 HOH B 24 724 69 HOH HOH . H 4 HOH B 25 725 17 HOH HOH . H 4 HOH B 26 726 31 HOH HOH . H 4 HOH B 27 727 54 HOH HOH . H 4 HOH B 28 728 12 HOH HOH . H 4 HOH B 29 729 32 HOH HOH . H 4 HOH B 30 730 11 HOH HOH . H 4 HOH B 31 731 34 HOH HOH . H 4 HOH B 32 732 67 HOH HOH . H 4 HOH B 33 733 51 HOH HOH . H 4 HOH B 34 734 48 HOH HOH . H 4 HOH B 35 735 55 HOH HOH . I 4 HOH D 1 701 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7E1 . . . E 3 16.864 -2.075 3.228 1 34.84 ? C01 7E1 601 A 1 HETATM 2 C C02 7E1 . . . E 3 16.405 -1.402 2.164 1 33.32 ? C02 7E1 601 A 1 HETATM 3 C C03 7E1 . . . E 3 17.243 -0.91 1.232 1 33.11 ? C03 7E1 601 A 1 HETATM 4 C C04 7E1 . . . E 3 18.562 -1.118 1.408 1 33.99 ? C04 7E1 601 A 1 HETATM 5 C C05 7E1 . . . E 3 19.011 -1.808 2.484 1 40.39 ? C05 7E1 601 A 1 HETATM 6 C C07 7E1 . . . E 3 23.19 -2.304 5.686 1 45.31 ? C07 7E1 601 A 1 HETATM 7 C C08 7E1 . . . E 3 23.203 -0.958 5.592 1 48.45 ? C08 7E1 601 A 1 HETATM 8 C C09 7E1 . . . E 3 22.009 -0.371 5.34 1 44.82 ? C09 7E1 601 A 1 HETATM 9 O O01 7E1 . . . E 3 16.751 -0.219 0.172 1 36.29 ? O01 7E1 601 A 1 HETATM 10 C C11 7E1 . . . E 3 24.385 -0.304 5.749 1 51.85 ? C11 7E1 601 A 1 HETATM 11 C C13 7E1 . . . E 3 20.558 -5.537 10.218 1 72.82 ? C13 7E1 601 A 1 HETATM 12 C C14 7E1 . . . E 3 21.89 -5.728 10.334 1 80.22 ? C14 7E1 601 A 1 HETATM 13 C C15 7E1 . . . E 3 22.421 -6.701 11.095 1 83.71 ? C15 7E1 601 A 1 HETATM 14 C C16 7E1 . . . E 3 21.623 -7.533 11.778 1 80.25 ? C16 7E1 601 A 1 HETATM 15 C C17 7E1 . . . E 3 20.298 -7.367 11.689 1 77.75 ? C17 7E1 601 A 1 HETATM 16 C C18 7E1 . . . E 3 19.781 -6.388 10.931 1 75.99 ? C18 7E1 601 A 1 HETATM 17 CL CL1 7E1 . . . E 3 24.138 -6.884 11.19 1 89.12 ? CL1 7E1 601 A 1 HETATM 18 S S01 7E1 . . . E 3 18.5 -4.384 8.87 1 54.8 ? S01 7E1 601 A 1 HETATM 19 O O05 7E1 . . . E 3 18.199 -5.799 8.613 1 50.26 ? O05 7E1 601 A 1 HETATM 20 O O06 7E1 . . . E 3 17.843 -3.626 9.933 1 53.4 ? O06 7E1 601 A 1 HETATM 21 C C23 7E1 . . . E 3 18.559 -3.021 4.532 1 43.63 ? C23 7E1 601 A 1 HETATM 22 C C24 7E1 . . . E 3 17.592 -3.94 5.319 1 46.38 ? C24 7E1 601 A 1 HETATM 23 C C25 7E1 . . . E 3 17.264 -3.249 6.641 1 46.45 ? C25 7E1 601 A 1 HETATM 24 C C26 7E1 . . . E 3 18.617 -3.441 7.371 1 48.16 ? C26 7E1 601 A 1 HETATM 25 C C27 7E1 . . . E 3 19.746 -3.194 5.168 1 43.97 ? C27 7E1 601 A 1 HETATM 26 C C28 7E1 . . . E 3 19.415 -4.199 6.294 1 44.28 ? C28 7E1 601 A 1 HETATM 27 O O07 7E1 . . . E 3 18.392 -5.011 5.778 1 45.06 ? O07 7E1 601 A 1 HETATM 28 C C29 7E1 . . . E 3 18.171 -2.311 3.44 1 40.22 ? C29 7E1 601 A 1 HETATM 29 C C30 7E1 . . . E 3 20.858 -2.423 5.277 1 42.29 ? C30 7E1 601 A 1 HETATM 30 O O02 7E1 . . . E 3 20.088 -4.502 9.436 1 60.24 ? O02 7E1 601 A 1 HETATM 31 C C06 7E1 . . . E 3 22.054 -2.996 5.535 1 42.88 ? C06 7E1 601 A 1 HETATM 32 C C10 7E1 . . . E 3 20.872 -1.082 5.195 1 41.35 ? C10 7E1 601 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 24 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 32 #