data_5TML # _model_server_result.job_id uuCpNsD9fGHvM8CUgYnuVA _model_server_result.datetime_utc '2024-10-12 11:18:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tml # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TML # _exptl.entry_id 5TML _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 567.049 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.33 _cell.angle_gamma 90 _cell.entry_id 5TML _cell.length_a 56.152 _cell.length_b 82.246 _cell.length_c 58.882 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TML _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C30 H27 Cl O7 S' _chem_comp.formula_weight 567.049 _chem_comp.id 7E1 _chem_comp.mon_nstd_flag . _chem_comp.name '6-{4-[(1S,4S,6R)-6-[(3-chlorophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '(E)-6-(4-((1R,4S,6R)-6-((3-chlorophenoxy)sulfonyl)-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl)phenyl)hex-5-enoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C03 7E1 sing 1 n n C03 C04 7E1 doub 2 n y C03 C02 7E1 sing 3 n y C04 C05 7E1 sing 4 n y C02 C01 7E1 doub 5 n y C05 C29 7E1 doub 6 n y C01 C29 7E1 sing 7 n y C29 C23 7E1 sing 8 n n C23 C27 7E1 doub 9 n n C23 C24 7E1 sing 10 n n C27 C30 7E1 sing 11 n n C27 C28 7E1 sing 12 n n C10 C30 7E1 doub 13 n y C10 C09 7E1 sing 14 n y C30 C06 7E1 sing 15 n y C24 O07 7E1 sing 16 n n C24 C25 7E1 sing 17 n n C09 C08 7E1 doub 18 n y C06 C07 7E1 doub 19 n y C08 C07 7E1 sing 20 n y C08 C11 7E1 sing 21 n n O07 C28 7E1 sing 22 n n C28 C26 7E1 sing 23 n n C25 C26 7E1 sing 24 n n C26 S01 7E1 sing 25 n n O05 S01 7E1 doub 26 n n S01 O02 7E1 sing 27 n n S01 O06 7E1 doub 28 n n O02 C13 7E1 sing 29 n n C13 C14 7E1 doub 30 n y C13 C18 7E1 sing 31 n y C14 C15 7E1 sing 32 n y C18 C17 7E1 doub 33 n y C15 CL1 7E1 sing 34 n n C15 C16 7E1 doub 35 n y C17 C16 7E1 sing 36 n y C01 H1 7E1 sing 37 n n C02 H2 7E1 sing 38 n n C04 H3 7E1 sing 39 n n C05 H4 7E1 sing 40 n n C07 H5 7E1 sing 41 n n C09 H6 7E1 sing 42 n n O01 H7 7E1 sing 43 n n C11 H8 7E1 sing 44 n n C14 H11 7E1 sing 45 n n C16 H12 7E1 sing 46 n n C17 H13 7E1 sing 47 n n C18 H14 7E1 sing 48 n n C24 H16 7E1 sing 49 n n C25 H17 7E1 sing 50 n n C25 H18 7E1 sing 51 n n C26 H19 7E1 sing 52 n n C28 H21 7E1 sing 53 n n C06 H22 7E1 sing 54 n n C10 H23 7E1 sing 55 n n C11 C1 7E1 doub 56 n n C1 C2 7E1 sing 57 n n C2 C3 7E1 sing 58 n n C3 C4 7E1 sing 59 n n C4 C5 7E1 sing 60 n n C5 O1 7E1 sing 61 n n C5 O2 7E1 doub 62 n n C1 H9 7E1 sing 63 n n C2 H10 7E1 sing 64 n n C2 H24 7E1 sing 65 n n C3 H25 7E1 sing 66 n n C3 H26 7E1 sing 67 n n C4 H27 7E1 sing 68 n n C4 H28 7E1 sing 69 n n O1 H29 7E1 sing 70 n n # _atom_sites.entry_id 5TML _atom_sites.fract_transf_matrix[1][1] 0.017809 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006954 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012159 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018232 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7E1 A 1 601 1 7E1 UNK . F 3 7E1 B 1 601 2 7E1 UNK . G 4 HOH A 1 701 59 HOH HOH . G 4 HOH A 2 702 24 HOH HOH . G 4 HOH A 3 703 23 HOH HOH . G 4 HOH A 4 704 7 HOH HOH . G 4 HOH A 5 705 43 HOH HOH . G 4 HOH A 6 706 13 HOH HOH . G 4 HOH A 7 707 57 HOH HOH . G 4 HOH A 8 708 1 HOH HOH . G 4 HOH A 9 709 14 HOH HOH . G 4 HOH A 10 710 20 HOH HOH . G 4 HOH A 11 711 47 HOH HOH . G 4 HOH A 12 712 37 HOH HOH . G 4 HOH A 13 713 56 HOH HOH . G 4 HOH A 14 714 42 HOH HOH . G 4 HOH A 15 715 22 HOH HOH . G 4 HOH A 16 716 15 HOH HOH . G 4 HOH A 17 717 50 HOH HOH . G 4 HOH A 18 718 52 HOH HOH . G 4 HOH A 19 719 39 HOH HOH . G 4 HOH A 20 720 35 HOH HOH . G 4 HOH A 21 721 3 HOH HOH . G 4 HOH A 22 722 8 HOH HOH . G 4 HOH A 23 723 19 HOH HOH . G 4 HOH A 24 724 68 HOH HOH . G 4 HOH A 25 725 40 HOH HOH . G 4 HOH A 26 726 18 HOH HOH . G 4 HOH A 27 727 41 HOH HOH . G 4 HOH A 28 728 29 HOH HOH . G 4 HOH A 29 729 61 HOH HOH . G 4 HOH A 30 730 45 HOH HOH . G 4 HOH A 31 731 66 HOH HOH . G 4 HOH A 32 732 64 HOH HOH . G 4 HOH A 33 733 38 HOH HOH . H 4 HOH B 1 701 28 HOH HOH . H 4 HOH B 2 702 44 HOH HOH . H 4 HOH B 3 703 25 HOH HOH . H 4 HOH B 4 704 49 HOH HOH . H 4 HOH B 5 705 63 HOH HOH . H 4 HOH B 6 706 4 HOH HOH . H 4 HOH B 7 707 30 HOH HOH . H 4 HOH B 8 708 9 HOH HOH . H 4 HOH B 9 709 60 HOH HOH . H 4 HOH B 10 710 6 HOH HOH . H 4 HOH B 11 711 2 HOH HOH . H 4 HOH B 12 712 62 HOH HOH . H 4 HOH B 13 713 27 HOH HOH . H 4 HOH B 14 714 16 HOH HOH . H 4 HOH B 15 715 33 HOH HOH . H 4 HOH B 16 716 26 HOH HOH . H 4 HOH B 17 717 36 HOH HOH . H 4 HOH B 18 718 10 HOH HOH . H 4 HOH B 19 719 5 HOH HOH . H 4 HOH B 20 720 65 HOH HOH . H 4 HOH B 21 721 21 HOH HOH . H 4 HOH B 22 722 53 HOH HOH . H 4 HOH B 23 723 46 HOH HOH . H 4 HOH B 24 724 69 HOH HOH . H 4 HOH B 25 725 17 HOH HOH . H 4 HOH B 26 726 31 HOH HOH . H 4 HOH B 27 727 54 HOH HOH . H 4 HOH B 28 728 12 HOH HOH . H 4 HOH B 29 729 32 HOH HOH . H 4 HOH B 30 730 11 HOH HOH . H 4 HOH B 31 731 34 HOH HOH . H 4 HOH B 32 732 67 HOH HOH . H 4 HOH B 33 733 51 HOH HOH . H 4 HOH B 34 734 48 HOH HOH . H 4 HOH B 35 735 55 HOH HOH . I 4 HOH D 1 701 58 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7E1 . . . F 3 8.801 7.082 33.03 1 42.67 ? C01 7E1 601 B 1 HETATM 2 C C02 7E1 . . . F 3 7.515 7.153 33.43 1 39.89 ? C02 7E1 601 B 1 HETATM 3 C C03 7E1 . . . F 3 7.088 6.578 34.575 1 36.84 ? C03 7E1 601 B 1 HETATM 4 C C04 7E1 . . . F 3 8.007 5.928 35.314 1 38.77 ? C04 7E1 601 B 1 HETATM 5 C C05 7E1 . . . F 3 9.298 5.861 34.912 1 44.58 ? C05 7E1 601 B 1 HETATM 6 C C07 7E1 . . . F 3 13.871 2.955 35.112 1 45.51 ? C07 7E1 601 B 1 HETATM 7 C C08 7E1 . . . F 3 13.069 1.906 34.818 1 46.63 ? C08 7E1 601 B 1 HETATM 8 C C09 7E1 . . . F 3 11.937 2.199 34.125 1 42.86 ? C09 7E1 601 B 1 HETATM 9 O O01 7E1 . . . F 3 5.779 6.65 34.941 1 36.79 ? O01 7E1 601 B 1 HETATM 10 C C11 7E1 . . . F 3 13.439 0.663 35.224 1 45.46 ? C11 7E1 601 B 1 HETATM 11 C C13 7E1 . . . F 3 16.936 5.529 30.694 1 80.54 ? C13 7E1 601 B 1 HETATM 12 C C14 7E1 . . . F 3 17.805 4.989 31.568 1 84.33 ? C14 7E1 601 B 1 HETATM 13 C C15 7E1 . . . F 3 19.123 5.226 31.501 1 88 ? C15 7E1 601 B 1 HETATM 14 C C16 7E1 . . . F 3 19.637 6.018 30.549 1 85.89 ? C16 7E1 601 B 1 HETATM 15 C C17 7E1 . . . F 3 18.798 6.566 29.659 1 85.7 ? C17 7E1 601 B 1 HETATM 16 C C18 7E1 . . . F 3 17.481 6.311 29.735 1 84.31 ? C18 7E1 601 B 1 HETATM 17 CL CL1 7E1 . . . F 3 20.158 4.49 32.666 1 94.16 ? CL1 7E1 601 B 1 HETATM 18 S S01 7E1 . . . F 3 14.397 6.35 30.346 1 64.39 ? S01 7E1 601 B 1 HETATM 19 O O05 7E1 . . . F 3 15.096 7.612 30.627 1 60.53 ? O05 7E1 601 B 1 HETATM 20 O O06 7E1 . . . F 3 14.156 5.912 28.978 1 67.61 ? O06 7E1 601 B 1 HETATM 21 C C23 7E1 . . . F 3 11.021 6.437 33.316 1 46.11 ? C23 7E1 601 B 1 HETATM 22 C C24 7E1 . . . F 3 11.496 7.541 32.36 1 48.86 ? C24 7E1 601 B 1 HETATM 23 C C25 7E1 . . . F 3 11.761 6.86 31.014 1 49.53 ? C25 7E1 601 B 1 HETATM 24 C C26 7E1 . . . F 3 13.018 6.051 31.413 1 53.59 ? C26 7E1 601 B 1 HETATM 25 C C27 7E1 . . . F 3 12.168 5.8 33.683 1 47.23 ? C27 7E1 601 B 1 HETATM 26 C C28 7E1 . . . F 3 13.24 6.537 32.864 1 48.6 ? C28 7E1 601 B 1 HETATM 27 O O07 7E1 . . . F 3 12.797 7.859 32.783 1 47.41 ? O07 7E1 601 B 1 HETATM 28 C C29 7E1 . . . F 3 9.739 6.432 33.75 1 45.25 ? C29 7E1 601 B 1 HETATM 29 C C30 7E1 . . . F 3 12.421 4.514 34.054 1 45.15 ? C30 7E1 601 B 1 HETATM 30 O O02 7E1 . . . F 3 15.59 5.242 30.794 1 71.55 ? O02 7E1 601 B 1 HETATM 31 C C06 7E1 . . . F 3 13.554 4.208 34.736 1 45.69 ? C06 7E1 601 B 1 HETATM 32 C C10 7E1 . . . F 3 11.628 3.461 33.749 1 41.08 ? C10 7E1 601 B 1 # _model_server_stats.io_time_ms 52 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 32 #