data_5TMM # _model_server_result.job_id IiZHgaUxM_sdGDnroJrOPw _model_server_result.datetime_utc '2024-11-25 11:17:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tmm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TMM # _exptl.entry_id 5TMM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 611.5 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '6-{4-[(1S,4S,6S)-6-[(4-bromophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 111.14 _cell.angle_gamma 90 _cell.entry_id 5TMM _cell.length_a 55.09 _cell.length_b 82.52 _cell.length_c 58.74 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TMM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C30 H27 Br O7 S' _chem_comp.formula_weight 611.5 _chem_comp.id 7M4 _chem_comp.mon_nstd_flag . _chem_comp.name '6-{4-[(1S,4S,6S)-6-[(4-bromophenoxy)sulfonyl]-3-(4-hydroxyphenyl)-7-oxabicyclo[2.2.1]hept-2-en-2-yl]phenyl}hex-5-enoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag BR1 C28 7M4 sing 1 n n C27 C28 7M4 doub 2 n y C27 C26 7M4 sing 3 n y C28 C29 7M4 sing 4 n y C26 C25 7M4 doub 5 n y C29 C30 7M4 doub 6 n y C25 C30 7M4 sing 7 n y C25 O04 7M4 sing 8 n n O07 S01 7M4 doub 9 n n O04 S01 7M4 sing 10 n n S01 O06 7M4 doub 11 n n S01 C03 7M4 sing 12 n n C03 C04 7M4 sing 13 n n C03 C02 7M4 sing 14 n n C04 C06 7M4 sing 15 n n C02 C01 7M4 sing 16 n n C02 O05 7M4 sing 17 n n C19 C11 7M4 sing 18 n n C11 C10 7M4 doub 19 n y C11 C12 7M4 sing 20 n y C10 C09 7M4 sing 21 n y C12 C13 7M4 doub 22 n y C09 C07 7M4 doub 23 n y C13 C07 7M4 sing 24 n y C07 C01 7M4 sing 25 n n C01 C05 7M4 doub 26 n n C06 O05 7M4 sing 27 n n C06 C05 7M4 sing 28 n n C05 C08 7M4 sing 29 n n C08 C18 7M4 doub 30 n y C08 C14 7M4 sing 31 n y C18 C17 7M4 sing 32 n y C14 C15 7M4 doub 33 n y C17 C16 7M4 doub 34 n y C15 C16 7M4 sing 35 n y C16 O01 7M4 sing 36 n n C02 H2 7M4 sing 37 n n C03 H3 7M4 sing 38 n n C04 H4 7M4 sing 39 n n C04 H5 7M4 sing 40 n n C06 H7 7M4 sing 41 n n C09 H8 7M4 sing 42 n n C10 H9 7M4 sing 43 n n C12 H10 7M4 sing 44 n n C13 H11 7M4 sing 45 n n C14 H12 7M4 sing 46 n n C15 H13 7M4 sing 47 n n C17 H14 7M4 sing 48 n n C18 H15 7M4 sing 49 n n O01 H16 7M4 sing 50 n n C19 H17 7M4 sing 51 n n C26 H20 7M4 sing 52 n n C27 H21 7M4 sing 53 n n C29 H22 7M4 sing 54 n n C30 H23 7M4 sing 55 n n C19 C1 7M4 doub 56 n n C1 C2 7M4 sing 57 n n C2 C3 7M4 sing 58 n n C3 C4 7M4 sing 59 n n C4 C5 7M4 sing 60 n n C5 O1 7M4 doub 61 n n C5 O2 7M4 sing 62 n n C1 H18 7M4 sing 63 n n C2 H19 7M4 sing 64 n n C2 H24 7M4 sing 65 n n C3 H25 7M4 sing 66 n n C3 H26 7M4 sing 67 n n C4 H27 7M4 sing 68 n n C4 H28 7M4 sing 69 n n O2 H29 7M4 sing 70 n n # _atom_sites.entry_id 5TMM _atom_sites.fract_transf_matrix[1][1] 0.018152 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007019 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018253 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7M4 A 1 601 601 7M4 7M4 . F 3 7M4 B 1 601 601 7M4 7M4 . G 4 HOH A 1 701 701 HOH HOH . G 4 HOH A 2 702 702 HOH HOH . G 4 HOH A 3 703 703 HOH HOH . G 4 HOH A 4 704 704 HOH HOH . G 4 HOH A 5 705 705 HOH HOH . G 4 HOH A 6 706 706 HOH HOH . G 4 HOH A 7 707 707 HOH HOH . G 4 HOH A 8 708 708 HOH HOH . G 4 HOH A 9 709 709 HOH HOH . G 4 HOH A 10 710 710 HOH HOH . G 4 HOH A 11 711 711 HOH HOH . G 4 HOH A 12 712 712 HOH HOH . G 4 HOH A 13 713 713 HOH HOH . G 4 HOH A 14 714 714 HOH HOH . G 4 HOH A 15 715 715 HOH HOH . G 4 HOH A 16 716 716 HOH HOH . G 4 HOH A 17 717 717 HOH HOH . G 4 HOH A 18 718 718 HOH HOH . G 4 HOH A 19 719 719 HOH HOH . G 4 HOH A 20 720 720 HOH HOH . G 4 HOH A 21 721 721 HOH HOH . G 4 HOH A 22 722 722 HOH HOH . G 4 HOH A 23 723 723 HOH HOH . G 4 HOH A 24 724 724 HOH HOH . G 4 HOH A 25 725 725 HOH HOH . G 4 HOH A 26 726 726 HOH HOH . G 4 HOH A 27 727 727 HOH HOH . G 4 HOH A 28 728 728 HOH HOH . G 4 HOH A 29 729 729 HOH HOH . G 4 HOH A 30 730 730 HOH HOH . G 4 HOH A 31 731 731 HOH HOH . G 4 HOH A 32 732 732 HOH HOH . G 4 HOH A 33 733 733 HOH HOH . G 4 HOH A 34 734 734 HOH HOH . G 4 HOH A 35 735 735 HOH HOH . G 4 HOH A 36 736 736 HOH HOH . G 4 HOH A 37 737 737 HOH HOH . G 4 HOH A 38 738 738 HOH HOH . G 4 HOH A 39 739 739 HOH HOH . G 4 HOH A 40 740 740 HOH HOH . G 4 HOH A 41 741 741 HOH HOH . G 4 HOH A 42 742 742 HOH HOH . G 4 HOH A 43 743 743 HOH HOH . G 4 HOH A 44 744 744 HOH HOH . G 4 HOH A 45 745 745 HOH HOH . G 4 HOH A 46 746 746 HOH HOH . G 4 HOH A 47 747 747 HOH HOH . G 4 HOH A 48 748 748 HOH HOH . G 4 HOH A 49 749 749 HOH HOH . G 4 HOH A 50 750 750 HOH HOH . G 4 HOH A 51 751 751 HOH HOH . G 4 HOH A 52 752 752 HOH HOH . G 4 HOH A 53 753 753 HOH HOH . G 4 HOH A 54 754 754 HOH HOH . G 4 HOH A 55 755 755 HOH HOH . G 4 HOH A 56 756 756 HOH HOH . G 4 HOH A 57 757 757 HOH HOH . G 4 HOH A 58 758 758 HOH HOH . G 4 HOH A 59 759 759 HOH HOH . G 4 HOH A 60 760 760 HOH HOH . G 4 HOH A 61 761 761 HOH HOH . G 4 HOH A 62 762 762 HOH HOH . G 4 HOH A 63 763 763 HOH HOH . G 4 HOH A 64 764 764 HOH HOH . G 4 HOH A 65 765 765 HOH HOH . G 4 HOH A 66 766 766 HOH HOH . G 4 HOH A 67 767 767 HOH HOH . G 4 HOH A 68 768 768 HOH HOH . G 4 HOH A 69 769 769 HOH HOH . G 4 HOH A 70 770 770 HOH HOH . G 4 HOH A 71 771 771 HOH HOH . G 4 HOH A 72 772 772 HOH HOH . G 4 HOH A 73 773 773 HOH HOH . G 4 HOH A 74 774 774 HOH HOH . G 4 HOH A 75 775 775 HOH HOH . G 4 HOH A 76 776 776 HOH HOH . G 4 HOH A 77 777 777 HOH HOH . G 4 HOH A 78 778 778 HOH HOH . G 4 HOH A 79 779 779 HOH HOH . G 4 HOH A 80 780 780 HOH HOH . G 4 HOH A 81 781 781 HOH HOH . G 4 HOH A 82 782 782 HOH HOH . G 4 HOH A 83 783 783 HOH HOH . H 4 HOH B 1 701 701 HOH HOH . H 4 HOH B 2 702 702 HOH HOH . H 4 HOH B 3 703 703 HOH HOH . H 4 HOH B 4 704 704 HOH HOH . H 4 HOH B 5 705 705 HOH HOH . H 4 HOH B 6 706 706 HOH HOH . H 4 HOH B 7 707 707 HOH HOH . H 4 HOH B 8 708 708 HOH HOH . H 4 HOH B 9 709 709 HOH HOH . H 4 HOH B 10 710 710 HOH HOH . H 4 HOH B 11 711 711 HOH HOH . H 4 HOH B 12 712 712 HOH HOH . H 4 HOH B 13 713 713 HOH HOH . H 4 HOH B 14 714 714 HOH HOH . H 4 HOH B 15 715 715 HOH HOH . H 4 HOH B 16 716 716 HOH HOH . H 4 HOH B 17 717 717 HOH HOH . H 4 HOH B 18 718 718 HOH HOH . H 4 HOH B 19 719 719 HOH HOH . H 4 HOH B 20 720 720 HOH HOH . H 4 HOH B 21 721 721 HOH HOH . H 4 HOH B 22 722 722 HOH HOH . H 4 HOH B 23 723 723 HOH HOH . H 4 HOH B 24 724 724 HOH HOH . H 4 HOH B 25 725 725 HOH HOH . H 4 HOH B 26 726 726 HOH HOH . H 4 HOH B 27 727 727 HOH HOH . H 4 HOH B 28 728 728 HOH HOH . H 4 HOH B 29 729 729 HOH HOH . H 4 HOH B 30 730 730 HOH HOH . H 4 HOH B 31 731 731 HOH HOH . H 4 HOH B 32 732 732 HOH HOH . H 4 HOH B 33 733 733 HOH HOH . H 4 HOH B 34 734 734 HOH HOH . H 4 HOH B 35 735 735 HOH HOH . H 4 HOH B 36 736 736 HOH HOH . H 4 HOH B 37 737 737 HOH HOH . H 4 HOH B 38 738 738 HOH HOH . H 4 HOH B 39 739 739 HOH HOH . H 4 HOH B 40 740 740 HOH HOH . H 4 HOH B 41 741 741 HOH HOH . H 4 HOH B 42 742 742 HOH HOH . H 4 HOH B 43 743 743 HOH HOH . H 4 HOH B 44 744 744 HOH HOH . H 4 HOH B 45 745 745 HOH HOH . H 4 HOH B 46 746 746 HOH HOH . H 4 HOH B 47 747 747 HOH HOH . H 4 HOH B 48 748 748 HOH HOH . H 4 HOH B 49 749 749 HOH HOH . H 4 HOH B 50 750 750 HOH HOH . H 4 HOH B 51 751 751 HOH HOH . H 4 HOH B 52 752 752 HOH HOH . H 4 HOH B 53 753 753 HOH HOH . H 4 HOH B 54 754 754 HOH HOH . H 4 HOH B 55 755 755 HOH HOH . H 4 HOH B 56 756 756 HOH HOH . H 4 HOH B 57 757 757 HOH HOH . H 4 HOH B 58 758 758 HOH HOH . H 4 HOH B 59 759 759 HOH HOH . H 4 HOH B 60 760 760 HOH HOH . H 4 HOH B 61 761 761 HOH HOH . H 4 HOH B 62 762 762 HOH HOH . H 4 HOH B 63 763 763 HOH HOH . H 4 HOH B 64 764 764 HOH HOH . H 4 HOH B 65 765 765 HOH HOH . H 4 HOH B 66 766 766 HOH HOH . H 4 HOH B 67 767 767 HOH HOH . H 4 HOH B 68 768 768 HOH HOH . H 4 HOH B 69 769 769 HOH HOH . H 4 HOH B 70 770 770 HOH HOH . H 4 HOH B 71 771 771 HOH HOH . H 4 HOH B 72 772 772 HOH HOH . H 4 HOH B 73 773 773 HOH HOH . H 4 HOH B 74 774 774 HOH HOH . H 4 HOH B 75 775 775 HOH HOH . H 4 HOH B 76 776 776 HOH HOH . H 4 HOH B 77 777 777 HOH HOH . H 4 HOH B 78 778 778 HOH HOH . H 4 HOH B 79 779 779 HOH HOH . H 4 HOH B 80 780 780 HOH HOH . H 4 HOH B 81 781 781 HOH HOH . H 4 HOH B 82 782 782 HOH HOH . H 4 HOH B 83 783 783 HOH HOH . H 4 HOH B 84 784 784 HOH HOH . H 4 HOH B 85 785 785 HOH HOH . H 4 HOH B 86 786 786 HOH HOH . H 4 HOH B 87 787 787 HOH HOH . H 4 HOH B 88 788 788 HOH HOH . H 4 HOH B 89 789 789 HOH HOH . H 4 HOH B 90 790 790 HOH HOH . H 4 HOH B 91 791 791 HOH HOH . H 4 HOH B 92 792 792 HOH HOH . H 4 HOH B 93 793 793 HOH HOH . H 4 HOH B 94 794 794 HOH HOH . H 4 HOH B 95 795 795 HOH HOH . I 4 HOH C 1 701 701 HOH HOH . I 4 HOH C 2 702 702 HOH HOH . J 4 HOH D 1 701 701 HOH HOH . J 4 HOH D 2 702 702 HOH HOH . J 4 HOH D 3 703 703 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7M4 . . . F 3 -12.604 -4.348 49.442 0.89 39.6 ? C01 7M4 601 B 1 HETATM 2 C C02 7M4 . . . F 3 -12.509 -5.816 49.049 0.89 42.58 ? C02 7M4 601 B 1 HETATM 3 C C03 7M4 . . . F 3 -11.672 -6.226 47.817 0.89 46.69 ? C03 7M4 601 B 1 HETATM 4 C C04 7M4 . . . F 3 -10.246 -5.963 48.379 0.89 45.5 ? C04 7M4 601 B 1 HETATM 5 C C05 7M4 . . . F 3 -11.483 -4.178 50.194 0.89 40.18 ? C05 7M4 601 B 1 HETATM 6 C C06 7M4 . . . F 3 -10.509 -5.331 49.805 0.89 43.7 ? C06 7M4 601 B 1 HETATM 7 C C07 7M4 . . . F 3 -13.789 -3.697 49.432 0.89 34.92 ? C07 7M4 601 B 1 HETATM 8 C C08 7M4 . . . F 3 -11.248 -3.565 51.377 0.89 35.7 ? C08 7M4 601 B 1 HETATM 9 C C09 7M4 . . . F 3 -14.953 -4.376 49.426 0.89 35.03 ? C09 7M4 601 B 1 HETATM 10 C C10 7M4 . . . F 3 -16.143 -3.757 49.416 0.89 33.92 ? C10 7M4 601 B 1 HETATM 11 C C11 7M4 . . . F 3 -16.241 -2.415 49.413 0.89 33.04 ? C11 7M4 601 B 1 HETATM 12 C C12 7M4 . . . F 3 -15.083 -1.727 49.419 0.89 28.78 ? C12 7M4 601 B 1 HETATM 13 C C13 7M4 . . . F 3 -13.892 -2.354 49.429 0.89 29.38 ? C13 7M4 601 B 1 HETATM 14 C C14 7M4 . . . F 3 -12.178 -3.249 52.302 0.89 33.57 ? C14 7M4 601 B 1 HETATM 15 C C15 7M4 . . . F 3 -11.851 -2.648 53.459 0.89 29.76 ? C15 7M4 601 B 1 HETATM 16 C C16 7M4 . . . F 3 -10.577 -2.339 53.752 0.89 29.96 ? C16 7M4 601 B 1 HETATM 17 C C17 7M4 . . . F 3 -9.643 -2.654 52.842 0.89 29.85 ? C17 7M4 601 B 1 HETATM 18 C C18 7M4 . . . F 3 -9.973 -3.253 51.69 0.89 31.35 ? C18 7M4 601 B 1 HETATM 19 O O01 7M4 . . . F 3 -10.228 -1.732 54.916 0.89 34.04 ? O01 7M4 601 B 1 HETATM 20 C C19 7M4 . . . F 3 -17.468 -1.857 49.402 0.89 35.18 ? C19 7M4 601 B 1 HETATM 21 C C25 7M4 . . . F 3 -14.03 -6.777 45.226 0.89 56.39 ? C25 7M4 601 B 1 HETATM 22 C C26 7M4 . . . F 3 -13.4 -7.048 44.065 0.89 57.06 ? C26 7M4 601 B 1 HETATM 23 C C27 7M4 . . . F 3 -13.857 -7.958 43.193 0.89 59.2 ? C27 7M4 601 B 1 HETATM 24 C C28 7M4 . . . F 3 -14.992 -8.621 43.458 0.89 62.55 ? C28 7M4 601 B 1 HETATM 25 C C29 7M4 . . . F 3 -15.651 -8.373 44.599 0.89 58.31 ? C29 7M4 601 B 1 HETATM 26 C C30 7M4 . . . F 3 -15.168 -7.463 45.457 0.89 55.77 ? C30 7M4 601 B 1 HETATM 27 BR BR1 7M4 . . . F 3 -15.655 -9.899 42.232 0.89 66.8 ? BR1 7M4 601 B 1 HETATM 28 O O05 7M4 . . . F 3 -11.599 -6.236 50.031 0.89 44.57 ? O05 7M4 601 B 1 HETATM 29 S S01 7M4 . . . F 3 -11.935 -5.461 46.13 0.89 52.06 ? S01 7M4 601 B 1 HETATM 30 O O06 7M4 . . . F 3 -11.601 -4.079 46.455 0.89 58.2 ? O06 7M4 601 B 1 HETATM 31 O O07 7M4 . . . F 3 -10.989 -6.292 45.397 0.89 48.22 ? O07 7M4 601 B 1 HETATM 32 O O04 7M4 . . . F 3 -13.561 -5.845 46.122 0.89 56.13 ? O04 7M4 601 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 32 #