data_5TMQ # _model_server_result.job_id e3MOuF3BFfv5mF9AkkLZ7g _model_server_result.datetime_utc '2024-10-12 11:13:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tmq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TMQ # _exptl.entry_id 5TMQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 497.358 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4-bromophenyl 4,4''-dihydroxy-[1,1':2',1''-terphenyl]-4'-sulfonate" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.98 _cell.angle_gamma 90 _cell.entry_id 5TMQ _cell.length_a 54.63 _cell.length_b 82.01 _cell.length_c 58.09 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TMQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C24 H17 Br O5 S' _chem_comp.formula_weight 497.358 _chem_comp.id 7M7 _chem_comp.mon_nstd_flag . _chem_comp.name "4-bromophenyl 4,4''-dihydroxy-[1,1':2',1''-terphenyl]-4'-sulfonate" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O29 C28 7M7 sing 1 n n C28 C30 7M7 doub 2 n y C28 C27 7M7 sing 3 n y C30 C31 7M7 sing 4 n y C27 C26 7M7 doub 5 n y C31 C25 7M7 doub 6 n y C26 C25 7M7 sing 7 n y C25 C24 7M7 sing 8 n n O01 C02 7M7 sing 9 n n C03 C02 7M7 doub 10 n y C03 C04 7M7 sing 11 n y C02 C05 7M7 sing 12 n y C04 C07 7M7 doub 13 n y BR1 C16 7M7 sing 14 n n C24 C23 7M7 doub 15 n y C24 C08 7M7 sing 16 n y C05 C06 7M7 doub 17 n y C07 C06 7M7 sing 18 n y C07 C08 7M7 sing 19 n n C23 C22 7M7 sing 20 n y C08 C09 7M7 doub 21 n y C16 C18 7M7 doub 22 n y C16 C15 7M7 sing 23 n y C18 C19 7M7 sing 24 n y C22 C10 7M7 doub 25 n y C09 C10 7M7 sing 26 n y C15 C14 7M7 doub 27 n y C19 C13 7M7 doub 28 n y C10 S11 7M7 sing 29 n n C14 C13 7M7 sing 30 n y C13 O12 7M7 sing 31 n n O12 S11 7M7 sing 32 n n S11 O21 7M7 doub 33 n n S11 O20 7M7 doub 34 n n O01 H1 7M7 sing 35 n n C03 H2 7M7 sing 36 n n C04 H3 7M7 sing 37 n n C05 H4 7M7 sing 38 n n C06 H5 7M7 sing 39 n n C09 H6 7M7 sing 40 n n C14 H7 7M7 sing 41 n n C15 H8 7M7 sing 42 n n C18 H9 7M7 sing 43 n n C19 H10 7M7 sing 44 n n C22 H11 7M7 sing 45 n n C23 H12 7M7 sing 46 n n C26 H13 7M7 sing 47 n n C27 H14 7M7 sing 48 n n O29 H15 7M7 sing 49 n n C30 H16 7M7 sing 50 n n C31 H17 7M7 sing 51 n n # _atom_sites.entry_id 5TMQ _atom_sites.fract_transf_matrix[1][1] 0.018305 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007019 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012194 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018437 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7M7 A 1 601 1 7M7 UNK . F 3 7M7 B 1 601 2 7M7 UNK . G 4 HOH A 1 701 83 HOH HOH . G 4 HOH A 2 702 66 HOH HOH . G 4 HOH A 3 703 95 HOH HOH . G 4 HOH A 4 704 57 HOH HOH . G 4 HOH A 5 705 48 HOH HOH . G 4 HOH A 6 706 64 HOH HOH . G 4 HOH A 7 707 31 HOH HOH . G 4 HOH A 8 708 76 HOH HOH . G 4 HOH A 9 709 10 HOH HOH . G 4 HOH A 10 710 75 HOH HOH . G 4 HOH A 11 711 69 HOH HOH . G 4 HOH A 12 712 41 HOH HOH . G 4 HOH A 13 713 4 HOH HOH . G 4 HOH A 14 714 74 HOH HOH . G 4 HOH A 15 715 84 HOH HOH . G 4 HOH A 16 716 40 HOH HOH . G 4 HOH A 17 717 67 HOH HOH . G 4 HOH A 18 718 93 HOH HOH . G 4 HOH A 19 719 106 HOH HOH . G 4 HOH A 20 720 98 HOH HOH . G 4 HOH A 21 721 99 HOH HOH . G 4 HOH A 22 722 13 HOH HOH . G 4 HOH A 23 723 90 HOH HOH . G 4 HOH A 24 724 20 HOH HOH . G 4 HOH A 25 725 19 HOH HOH . G 4 HOH A 26 726 59 HOH HOH . G 4 HOH A 27 727 2 HOH HOH . G 4 HOH A 28 728 109 HOH HOH . G 4 HOH A 29 729 82 HOH HOH . G 4 HOH A 30 730 62 HOH HOH . G 4 HOH A 31 731 100 HOH HOH . G 4 HOH A 32 732 16 HOH HOH . G 4 HOH A 33 733 8 HOH HOH . G 4 HOH A 34 734 73 HOH HOH . G 4 HOH A 35 735 52 HOH HOH . G 4 HOH A 36 736 11 HOH HOH . G 4 HOH A 37 737 78 HOH HOH . G 4 HOH A 38 738 36 HOH HOH . G 4 HOH A 39 739 72 HOH HOH . G 4 HOH A 40 740 42 HOH HOH . G 4 HOH A 41 741 26 HOH HOH . G 4 HOH A 42 742 3 HOH HOH . G 4 HOH A 43 743 94 HOH HOH . G 4 HOH A 44 744 18 HOH HOH . G 4 HOH A 45 745 70 HOH HOH . G 4 HOH A 46 746 44 HOH HOH . G 4 HOH A 47 747 12 HOH HOH . G 4 HOH A 48 748 45 HOH HOH . G 4 HOH A 49 749 17 HOH HOH . G 4 HOH A 50 750 39 HOH HOH . G 4 HOH A 51 751 77 HOH HOH . G 4 HOH A 52 752 87 HOH HOH . G 4 HOH A 53 753 1 HOH HOH . G 4 HOH A 54 754 60 HOH HOH . G 4 HOH A 55 755 91 HOH HOH . G 4 HOH A 56 756 71 HOH HOH . G 4 HOH A 57 757 92 HOH HOH . G 4 HOH A 58 758 79 HOH HOH . G 4 HOH A 59 759 103 HOH HOH . G 4 HOH A 60 760 85 HOH HOH . G 4 HOH A 61 761 14 HOH HOH . H 4 HOH B 1 701 23 HOH HOH . H 4 HOH B 2 702 54 HOH HOH . H 4 HOH B 3 703 56 HOH HOH . H 4 HOH B 4 704 102 HOH HOH . H 4 HOH B 5 705 49 HOH HOH . H 4 HOH B 6 706 21 HOH HOH . H 4 HOH B 7 707 61 HOH HOH . H 4 HOH B 8 708 7 HOH HOH . H 4 HOH B 9 709 30 HOH HOH . H 4 HOH B 10 710 28 HOH HOH . H 4 HOH B 11 711 15 HOH HOH . H 4 HOH B 12 712 86 HOH HOH . H 4 HOH B 13 713 27 HOH HOH . H 4 HOH B 14 714 104 HOH HOH . H 4 HOH B 15 715 110 HOH HOH . H 4 HOH B 16 716 5 HOH HOH . H 4 HOH B 17 717 89 HOH HOH . H 4 HOH B 18 718 46 HOH HOH . H 4 HOH B 19 719 63 HOH HOH . H 4 HOH B 20 720 32 HOH HOH . H 4 HOH B 21 721 47 HOH HOH . H 4 HOH B 22 722 22 HOH HOH . H 4 HOH B 23 723 9 HOH HOH . H 4 HOH B 24 724 55 HOH HOH . H 4 HOH B 25 725 96 HOH HOH . H 4 HOH B 26 726 6 HOH HOH . H 4 HOH B 27 727 25 HOH HOH . H 4 HOH B 28 728 51 HOH HOH . H 4 HOH B 29 729 101 HOH HOH . H 4 HOH B 30 730 29 HOH HOH . H 4 HOH B 31 731 88 HOH HOH . H 4 HOH B 32 732 112 HOH HOH . H 4 HOH B 33 733 80 HOH HOH . H 4 HOH B 34 734 35 HOH HOH . H 4 HOH B 35 735 38 HOH HOH . H 4 HOH B 36 736 43 HOH HOH . H 4 HOH B 37 737 81 HOH HOH . H 4 HOH B 38 738 58 HOH HOH . H 4 HOH B 39 739 34 HOH HOH . H 4 HOH B 40 740 65 HOH HOH . H 4 HOH B 41 741 50 HOH HOH . H 4 HOH B 42 742 107 HOH HOH . H 4 HOH B 43 743 37 HOH HOH . H 4 HOH B 44 744 68 HOH HOH . H 4 HOH B 45 745 111 HOH HOH . H 4 HOH B 46 746 113 HOH HOH . H 4 HOH B 47 747 105 HOH HOH . H 4 HOH B 48 748 53 HOH HOH . H 4 HOH B 49 749 114 HOH HOH . H 4 HOH B 50 750 97 HOH HOH . H 4 HOH B 51 751 33 HOH HOH . I 4 HOH C 1 701 24 HOH HOH . I 4 HOH C 2 702 108 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7M7 . . . F 3 12.216 1.269 35.261 0.69 54.1 ? O01 7M7 601 B 1 HETATM 2 C C02 7M7 . . . F 3 12.192 2.424 34.462 0.69 46.3 ? C02 7M7 601 B 1 HETATM 3 C C03 7M7 . . . F 3 11.305 2.518 33.4 0.69 41.25 ? C03 7M7 601 B 1 HETATM 4 C C04 7M7 . . . F 3 11.283 3.657 32.612 0.69 38.97 ? C04 7M7 601 B 1 HETATM 5 C C05 7M7 . . . F 3 13.06 3.464 34.742 0.69 43.45 ? C05 7M7 601 B 1 HETATM 6 C C06 7M7 . . . F 3 13.039 4.601 33.957 0.69 41.25 ? C06 7M7 601 B 1 HETATM 7 C C07 7M7 . . . F 3 12.144 4.701 32.905 0.69 40.4 ? C07 7M7 601 B 1 HETATM 8 C C08 7M7 . . . F 3 12.174 5.954 32.066 0.69 39.08 ? C08 7M7 601 B 1 HETATM 9 C C09 7M7 . . . F 3 13.359 6.166 31.386 0.69 45.13 ? C09 7M7 601 B 1 HETATM 10 C C10 7M7 . . . F 3 13.523 7.276 30.586 0.69 53.54 ? C10 7M7 601 B 1 HETATM 11 S S11 7M7 . . . F 3 15.061 7.494 29.736 0.69 72.78 ? S11 7M7 601 B 1 HETATM 12 O O12 7M7 . . . F 3 16.166 7.901 30.679 0.69 78.52 ? O12 7M7 601 B 1 HETATM 13 C C13 7M7 . . . F 3 15.93 8.997 31.533 0.69 83.41 ? C13 7M7 601 B 1 HETATM 14 C C14 7M7 . . . F 3 16.302 8.904 32.862 0.69 87.67 ? C14 7M7 601 B 1 HETATM 15 C C15 7M7 . . . F 3 16.089 9.968 33.722 0.69 92.65 ? C15 7M7 601 B 1 HETATM 16 C C16 7M7 . . . F 3 15.5 11.131 33.252 0.69 96.4 ? C16 7M7 601 B 1 HETATM 17 BR BR1 7M7 . . . F 3 15.209 12.591 34.45 0.69 104.62 ? BR1 7M7 601 B 1 HETATM 18 C C18 7M7 . . . F 3 15.127 11.23 31.921 0.69 90.88 ? C18 7M7 601 B 1 HETATM 19 C C19 7M7 . . . F 3 15.343 10.164 31.062 0.69 86.42 ? C19 7M7 601 B 1 HETATM 20 O O20 7M7 . . . F 3 14.894 8.487 28.622 0.69 75.14 ? O20 7M7 601 B 1 HETATM 21 O O21 7M7 . . . F 3 15.436 6.252 28.963 0.69 76.83 ? O21 7M7 601 B 1 HETATM 22 C C22 7M7 . . . F 3 12.495 8.193 30.451 0.69 43.94 ? C22 7M7 601 B 1 HETATM 23 C C23 7M7 . . . F 3 11.304 7.985 31.132 0.69 38.56 ? C23 7M7 601 B 1 HETATM 24 C C24 7M7 . . . F 3 11.131 6.873 31.946 0.69 33.39 ? C24 7M7 601 B 1 HETATM 25 C C25 7M7 . . . F 3 9.788 6.729 32.646 0.69 27.52 ? C25 7M7 601 B 1 HETATM 26 C C26 7M7 . . . F 3 8.634 6.916 31.899 0.69 22.14 ? C26 7M7 601 B 1 HETATM 27 C C27 7M7 . . . F 3 7.387 6.802 32.494 0.69 19.66 ? C27 7M7 601 B 1 HETATM 28 C C28 7M7 . . . F 3 7.294 6.505 33.845 0.69 22.44 ? C28 7M7 601 B 1 HETATM 29 O O29 7M7 . . . F 3 6.029 6.389 34.449 0.69 26.81 ? O29 7M7 601 B 1 HETATM 30 C C30 7M7 . . . F 3 8.444 6.323 34.598 0.69 25.85 ? C30 7M7 601 B 1 HETATM 31 C C31 7M7 . . . F 3 9.692 6.44 34 0.69 27.82 ? C31 7M7 601 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 31 #