data_5TMR # _model_server_result.job_id U-_0l-8TxjPS3XxAMiUkTQ _model_server_result.datetime_utc '2024-10-12 11:17:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tmr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TMR # _exptl.entry_id 5TMR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 362.461 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 3-{4-[cyclohexylidene(4-hydroxyphenyl)methyl]phenyl}prop-2-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.72 _cell.angle_gamma 90 _cell.entry_id 5TMR _cell.length_a 54.866 _cell.length_b 82.287 _cell.length_c 58.662 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TMR _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C24 H26 O3' _chem_comp.formula_weight 362.461 _chem_comp.id 7FD _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 3-{4-[cyclohexylidene(4-hydroxyphenyl)methyl]phenyl}prop-2-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C05 C06 7FD doub 1 n y C05 C02 7FD sing 2 n y O01 C02 7FD sing 3 n n C06 C07 7FD sing 4 n y C13 C12 7FD sing 5 n n C20 C21 7FD doub 6 n y C20 C12 7FD sing 7 n y C02 C03 7FD doub 8 n y C21 C09 7FD sing 9 n y C12 C11 7FD doub 10 n y C07 C08 7FD sing 11 n n C07 C04 7FD doub 12 n y C09 C08 7FD sing 13 n n C09 C10 7FD doub 14 n y C11 C10 7FD sing 15 n y C03 C04 7FD sing 16 n y C08 C22 7FD doub 17 n n C26 C27 7FD sing 18 n n C26 C25 7FD sing 19 n n C22 C27 7FD sing 20 n n C22 C23 7FD sing 21 n n C24 C25 7FD sing 22 n n C24 C23 7FD sing 23 n n O01 H1 7FD sing 24 n n C03 H2 7FD sing 25 n n C04 H3 7FD sing 26 n n C05 H4 7FD sing 27 n n C06 H5 7FD sing 28 n n C10 H7 7FD sing 29 n n C11 H8 7FD sing 30 n n C13 H9 7FD sing 31 n n C20 H12 7FD sing 32 n n C21 H13 7FD sing 33 n n C23 H15 7FD sing 34 n n C23 H16 7FD sing 35 n n C24 H17 7FD sing 36 n n C24 H18 7FD sing 37 n n C25 H19 7FD sing 38 n n C25 H20 7FD sing 39 n n C26 H21 7FD sing 40 n n C26 H22 7FD sing 41 n n C27 H23 7FD sing 42 n n C27 H24 7FD sing 43 n n C13 C1 7FD doub 44 n n C1 C2 7FD sing 45 n n C2 O1 7FD doub 46 n n C2 O2 7FD sing 47 n n O2 C5 7FD sing 48 n n C5 C6 7FD sing 49 n n C1 H6 7FD sing 50 n n C5 H10 7FD sing 51 n n C5 H11 7FD sing 52 n n C6 H14 7FD sing 53 n n C6 H25 7FD sing 54 n n C6 H26 7FD sing 55 n n # _atom_sites.entry_id 5TMR _atom_sites.fract_transf_matrix[1][1] 0.018226 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006894 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012153 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018226 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7FD A 1 601 1 7FD 7FD . F 3 7FD B 1 601 2 7FD 7FD . G 4 HOH A 1 701 701 HOH HOH . G 4 HOH A 2 702 702 HOH HOH . G 4 HOH A 3 703 703 HOH HOH . G 4 HOH A 4 704 704 HOH HOH . G 4 HOH A 5 705 705 HOH HOH . G 4 HOH A 6 706 707 HOH HOH . G 4 HOH A 7 707 706 HOH HOH . G 4 HOH A 8 708 708 HOH HOH . G 4 HOH A 9 709 709 HOH HOH . G 4 HOH A 10 710 712 HOH HOH . G 4 HOH A 11 711 710 HOH HOH . G 4 HOH A 12 712 711 HOH HOH . G 4 HOH A 13 713 714 HOH HOH . G 4 HOH A 14 714 713 HOH HOH . G 4 HOH A 15 715 715 HOH HOH . G 4 HOH A 16 716 716 HOH HOH . G 4 HOH A 17 717 717 HOH HOH . G 4 HOH A 18 718 718 HOH HOH . G 4 HOH A 19 719 719 HOH HOH . G 4 HOH A 20 720 720 HOH HOH . G 4 HOH A 21 721 721 HOH HOH . G 4 HOH A 22 722 722 HOH HOH . G 4 HOH A 23 723 723 HOH HOH . G 4 HOH A 24 724 724 HOH HOH . G 4 HOH A 25 725 725 HOH HOH . G 4 HOH A 26 726 726 HOH HOH . G 4 HOH A 27 727 727 HOH HOH . G 4 HOH A 28 728 728 HOH HOH . G 4 HOH A 29 729 729 HOH HOH . G 4 HOH A 30 730 730 HOH HOH . G 4 HOH A 31 731 731 HOH HOH . G 4 HOH A 32 732 732 HOH HOH . H 4 HOH C 1 701 701 HOH HOH . I 4 HOH B 1 701 701 HOH HOH . I 4 HOH B 2 702 702 HOH HOH . I 4 HOH B 3 703 703 HOH HOH . I 4 HOH B 4 704 704 HOH HOH . I 4 HOH B 5 705 705 HOH HOH . I 4 HOH B 6 706 707 HOH HOH . I 4 HOH B 7 707 706 HOH HOH . I 4 HOH B 8 708 708 HOH HOH . I 4 HOH B 9 709 712 HOH HOH . I 4 HOH B 10 710 710 HOH HOH . I 4 HOH B 11 711 709 HOH HOH . I 4 HOH B 12 712 711 HOH HOH . I 4 HOH B 13 713 713 HOH HOH . I 4 HOH B 14 714 715 HOH HOH . I 4 HOH B 15 715 714 HOH HOH . I 4 HOH B 16 716 716 HOH HOH . I 4 HOH B 17 717 720 HOH HOH . I 4 HOH B 18 718 718 HOH HOH . I 4 HOH B 19 719 717 HOH HOH . I 4 HOH B 20 720 719 HOH HOH . I 4 HOH B 21 721 722 HOH HOH . I 4 HOH B 22 722 723 HOH HOH . I 4 HOH B 23 723 724 HOH HOH . I 4 HOH B 24 724 725 HOH HOH . I 4 HOH B 25 725 726 HOH HOH . I 4 HOH B 26 726 727 HOH HOH . I 4 HOH B 27 727 729 HOH HOH . I 4 HOH B 28 728 728 HOH HOH . I 4 HOH B 29 729 730 HOH HOH . I 4 HOH B 30 730 731 HOH HOH . I 4 HOH B 31 731 721 HOH HOH . I 4 HOH B 32 732 732 HOH HOH . I 4 HOH B 33 733 733 HOH HOH . I 4 HOH B 34 734 734 HOH HOH . I 4 HOH B 35 735 735 HOH HOH . I 4 HOH B 36 736 736 HOH HOH . I 4 HOH B 37 737 737 HOH HOH . I 4 HOH B 38 738 738 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7FD . . . E 3 0.837 5.592 20.299 1 54.21 ? O01 7FD 601 A 1 HETATM 2 C C02 7FD . . . E 3 -0.463 5.336 20.589 1 56.41 ? C02 7FD 601 A 1 HETATM 3 C C03 7FD . . . E 3 -0.932 5.546 21.848 1 58.14 ? C03 7FD 601 A 1 HETATM 4 C C04 7FD . . . E 3 -2.235 5.286 22.136 1 59.75 ? C04 7FD 601 A 1 HETATM 5 C C05 7FD . . . E 3 -1.26 4.86 19.604 1 57.84 ? C05 7FD 601 A 1 HETATM 6 C C06 7FD . . . E 3 -2.563 4.582 19.89 1 61.53 ? C06 7FD 601 A 1 HETATM 7 C C07 7FD . . . E 3 -3.044 4.795 21.153 1 62.73 ? C07 7FD 601 A 1 HETATM 8 C C08 7FD . . . E 3 -4.493 4.495 21.482 1 66.33 ? C08 7FD 601 A 1 HETATM 9 C C09 7FD . . . E 3 -5.031 3.112 21.174 1 67.15 ? C09 7FD 601 A 1 HETATM 10 C C10 7FD . . . E 3 -4.376 1.919 21.502 1 65.21 ? C10 7FD 601 A 1 HETATM 11 C C11 7FD . . . E 3 -4.927 0.712 21.193 1 65.34 ? C11 7FD 601 A 1 HETATM 12 C C12 7FD . . . E 3 -6.099 0.632 20.568 1 65.48 ? C12 7FD 601 A 1 HETATM 13 C C13 7FD . . . E 3 -6.716 -0.713 20.214 1 63.5 ? C13 7FD 601 A 1 HETATM 14 C C20 7FD . . . E 3 -6.756 1.727 20.233 1 67.34 ? C20 7FD 601 A 1 HETATM 15 C C21 7FD . . . E 3 -6.253 2.958 20.521 1 68.48 ? C21 7FD 601 A 1 HETATM 16 C C22 7FD . . . E 3 -5.177 5.306 22.244 1 67.89 ? C22 7FD 601 A 1 HETATM 17 C C23 7FD . . . E 3 -6.273 4.746 23.142 1 69.57 ? C23 7FD 601 A 1 HETATM 18 C C24 7FD . . . E 3 -6.466 5.645 24.332 1 69.38 ? C24 7FD 601 A 1 HETATM 19 C C25 7FD . . . E 3 -6.804 7.024 23.837 1 68.66 ? C25 7FD 601 A 1 HETATM 20 C C26 7FD . . . E 3 -5.617 7.678 23.165 1 67.15 ? C26 7FD 601 A 1 HETATM 21 C C27 7FD . . . E 3 -4.702 6.742 22.392 1 67.32 ? C27 7FD 601 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 21 #