data_5TMS # _model_server_result.job_id eVoDLgVBeQ9jPsSqnq2jPQ _model_server_result.datetime_utc '2024-11-29 03:07:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tms # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TMS # _exptl.entry_id 5TMS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 402.525 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ethyl 3-(4-{[(1s,5s)-bicyclo[3.3.1]nonan-9-ylidene](4-hydroxyphenyl)methyl}phenyl)prop-2-enoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.81 _cell.angle_gamma 90 _cell.entry_id 5TMS _cell.length_a 54.646 _cell.length_b 81.853 _cell.length_c 58.421 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TMS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C27 H30 O3' _chem_comp.formula_weight 402.525 _chem_comp.id 7FG _chem_comp.mon_nstd_flag . _chem_comp.name 'ethyl 3-(4-{[(1s,5s)-bicyclo[3.3.1]nonan-9-ylidene](4-hydroxyphenyl)methyl}phenyl)prop-2-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C15 7FG sing 1 n n C14 C15 7FG doub 2 n y C14 C13 7FG sing 3 n y C15 C16 7FG sing 4 n y C13 C12 7FG doub 5 n y C16 C17 7FG doub 6 n y C12 C17 7FG sing 7 n y C12 C10 7FG sing 8 n n C22 C21 7FG doub 9 n y C22 C11 7FG sing 10 n y C10 C11 7FG sing 11 n n C10 C09 7FG doub 12 n n C21 C20 7FG sing 13 n y C11 C18 7FG doub 14 n y C20 C19 7FG doub 15 n y C18 C19 7FG sing 16 n y C09 C08 7FG sing 17 n n C09 C04 7FG sing 18 n n C08 C07 7FG sing 19 n n C08 C01 7FG sing 20 n n C07 C06 7FG sing 21 n n C05 C04 7FG sing 22 n n C05 C06 7FG sing 23 n n C04 C03 7FG sing 24 n n C01 C02 7FG sing 25 n n C03 C02 7FG sing 26 n n C01 H1 7FG sing 27 n n C01 H2 7FG sing 28 n n C02 H3 7FG sing 29 n n C03 H4 7FG sing 30 n n C04 H5 7FG sing 31 n n C05 H6 7FG sing 32 n n C05 H7 7FG sing 33 n n C06 H8 7FG sing 34 n n C06 H9 7FG sing 35 n n C07 H10 7FG sing 36 n n C07 H11 7FG sing 37 n n C08 H12 7FG sing 38 n n C13 H15 7FG sing 39 n n C14 H16 7FG sing 40 n n C16 H17 7FG sing 41 n n C17 H18 7FG sing 42 n n C18 H19 7FG sing 43 n n C19 H20 7FG sing 44 n n C21 H22 7FG sing 45 n n C22 H23 7FG sing 46 n n O01 H24 7FG sing 47 n n C20 C1 7FG sing 48 n n C1 C2 7FG doub 49 n n C2 C3 7FG sing 50 n n C3 O2 7FG sing 51 n n C3 O1 7FG doub 52 n n O2 C6 7FG sing 53 n n C6 C7 7FG sing 54 n n C02 H25 7FG sing 55 n n C03 H26 7FG sing 56 n n C1 H13 7FG sing 57 n n C2 H14 7FG sing 58 n n C6 H21 7FG sing 59 n n C6 H27 7FG sing 60 n n C7 H28 7FG sing 61 n n C7 H29 7FG sing 62 n n C7 H30 7FG sing 63 n n # _atom_sites.entry_id 5TMS _atom_sites.fract_transf_matrix[1][1] 0.0183 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006955 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7FG A 1 601 1 7FG UNK . F 3 7FG B 1 601 2 7FG UNK . G 4 HOH A 1 701 43 HOH HOH . G 4 HOH A 2 702 42 HOH HOH . G 4 HOH A 3 703 86 HOH HOH . G 4 HOH A 4 704 11 HOH HOH . G 4 HOH A 5 705 41 HOH HOH . G 4 HOH A 6 706 76 HOH HOH . G 4 HOH A 7 707 78 HOH HOH . G 4 HOH A 8 708 31 HOH HOH . G 4 HOH A 9 709 21 HOH HOH . G 4 HOH A 10 710 72 HOH HOH . G 4 HOH A 11 711 88 HOH HOH . G 4 HOH A 12 712 85 HOH HOH . G 4 HOH A 13 713 10 HOH HOH . G 4 HOH A 14 714 71 HOH HOH . G 4 HOH A 15 715 4 HOH HOH . G 4 HOH A 16 716 81 HOH HOH . G 4 HOH A 17 717 32 HOH HOH . G 4 HOH A 18 718 33 HOH HOH . G 4 HOH A 19 719 8 HOH HOH . G 4 HOH A 20 720 13 HOH HOH . G 4 HOH A 21 721 70 HOH HOH . G 4 HOH A 22 722 40 HOH HOH . G 4 HOH A 23 723 64 HOH HOH . G 4 HOH A 24 724 15 HOH HOH . G 4 HOH A 25 725 18 HOH HOH . G 4 HOH A 26 726 26 HOH HOH . G 4 HOH A 27 727 19 HOH HOH . G 4 HOH A 28 728 75 HOH HOH . G 4 HOH A 29 729 7 HOH HOH . G 4 HOH A 30 730 23 HOH HOH . G 4 HOH A 31 731 61 HOH HOH . G 4 HOH A 32 732 104 HOH HOH . G 4 HOH A 33 733 101 HOH HOH . G 4 HOH A 34 734 6 HOH HOH . G 4 HOH A 35 735 66 HOH HOH . G 4 HOH A 36 736 1 HOH HOH . G 4 HOH A 37 737 60 HOH HOH . G 4 HOH A 38 738 96 HOH HOH . G 4 HOH A 39 739 73 HOH HOH . G 4 HOH A 40 740 50 HOH HOH . G 4 HOH A 41 741 80 HOH HOH . G 4 HOH A 42 742 30 HOH HOH . G 4 HOH A 43 743 93 HOH HOH . G 4 HOH A 44 744 108 HOH HOH . G 4 HOH A 45 745 90 HOH HOH . G 4 HOH A 46 746 139 HOH HOH . H 4 HOH B 1 701 68 HOH HOH . H 4 HOH B 2 702 36 HOH HOH . H 4 HOH B 3 703 128 HOH HOH . H 4 HOH B 4 704 27 HOH HOH . H 4 HOH B 5 705 47 HOH HOH . H 4 HOH B 6 706 14 HOH HOH . H 4 HOH B 7 707 87 HOH HOH . H 4 HOH B 8 708 140 HOH HOH . H 4 HOH B 9 709 37 HOH HOH . H 4 HOH B 10 710 16 HOH HOH . H 4 HOH B 11 711 105 HOH HOH . H 4 HOH B 12 712 35 HOH HOH . H 4 HOH B 13 713 3 HOH HOH . H 4 HOH B 14 714 5 HOH HOH . H 4 HOH B 15 715 9 HOH HOH . H 4 HOH B 16 716 28 HOH HOH . H 4 HOH B 17 717 12 HOH HOH . H 4 HOH B 18 718 20 HOH HOH . H 4 HOH B 19 719 2 HOH HOH . H 4 HOH B 20 720 38 HOH HOH . H 4 HOH B 21 721 84 HOH HOH . H 4 HOH B 22 722 51 HOH HOH . H 4 HOH B 23 723 126 HOH HOH . H 4 HOH B 24 724 106 HOH HOH . H 4 HOH B 25 725 57 HOH HOH . H 4 HOH B 26 726 69 HOH HOH . H 4 HOH B 27 727 56 HOH HOH . H 4 HOH B 28 728 39 HOH HOH . H 4 HOH B 29 729 109 HOH HOH . H 4 HOH B 30 730 102 HOH HOH . H 4 HOH B 31 731 67 HOH HOH . H 4 HOH B 32 732 89 HOH HOH . H 4 HOH B 33 733 83 HOH HOH . H 4 HOH B 34 734 45 HOH HOH . H 4 HOH B 35 735 34 HOH HOH . H 4 HOH B 36 736 17 HOH HOH . H 4 HOH B 37 737 65 HOH HOH . H 4 HOH B 38 738 24 HOH HOH . H 4 HOH B 39 739 138 HOH HOH . H 4 HOH B 40 740 22 HOH HOH . H 4 HOH B 41 741 137 HOH HOH . H 4 HOH B 42 742 95 HOH HOH . H 4 HOH B 43 743 49 HOH HOH . H 4 HOH B 44 744 44 HOH HOH . H 4 HOH B 45 745 62 HOH HOH . H 4 HOH B 46 746 25 HOH HOH . H 4 HOH B 47 747 59 HOH HOH . I 4 HOH C 1 701 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 7FG . . . F 3 14.328 6.129 32.603 1 73.32 ? C01 7FG 601 B 1 HETATM 2 C C02 7FG . . . F 3 14.453 5.633 31.158 1 72.24 ? C02 7FG 601 B 1 HETATM 3 C C03 7FG . . . F 3 13.107 5.273 30.522 1 74.81 ? C03 7FG 601 B 1 HETATM 4 C C04 7FG . . . F 3 11.935 6.183 30.938 1 77.85 ? C04 7FG 601 B 1 HETATM 5 C C05 7FG . . . F 3 11.971 7.592 30.296 1 79.75 ? C05 7FG 601 B 1 HETATM 6 C C06 7FG . . . F 3 12.116 8.75 31.286 1 79.36 ? C06 7FG 601 B 1 HETATM 7 C C07 7FG . . . F 3 13.205 8.453 32.321 1 77.74 ? C07 7FG 601 B 1 HETATM 8 C C08 7FG . . . F 3 13.113 7.034 32.911 1 75.1 ? C08 7FG 601 B 1 HETATM 9 C C09 7FG . . . F 3 11.846 6.316 32.457 1 74.39 ? C09 7FG 601 B 1 HETATM 10 C C10 7FG . . . F 3 11.061 5.541 33.257 1 68.52 ? C10 7FG 601 B 1 HETATM 11 C C11 7FG . . . F 3 11.372 4.238 33.495 1 65.62 ? C11 7FG 601 B 1 HETATM 12 C C12 7FG . . . F 3 9.793 5.91 33.58 1 64.76 ? C12 7FG 601 B 1 HETATM 13 C C13 7FG . . . F 3 9.325 5.789 34.844 1 61.68 ? C13 7FG 601 B 1 HETATM 14 C C14 7FG . . . F 3 8.077 6.144 35.192 1 56.75 ? C14 7FG 601 B 1 HETATM 15 C C15 7FG . . . F 3 7.22 6.644 34.288 1 56.93 ? C15 7FG 601 B 1 HETATM 16 C C16 7FG . . . F 3 7.667 6.772 33.028 1 62.66 ? C16 7FG 601 B 1 HETATM 17 C C17 7FG . . . F 3 8.916 6.415 32.688 1 64.09 ? C17 7FG 601 B 1 HETATM 18 C C18 7FG . . . F 3 12.374 3.895 34.336 1 63.16 ? C18 7FG 601 B 1 HETATM 19 C C19 7FG . . . F 3 12.705 2.62 34.588 1 65.65 ? C19 7FG 601 B 1 HETATM 20 C C20 7FG . . . F 3 12.052 1.59 34.015 1 67.64 ? C20 7FG 601 B 1 HETATM 21 C C21 7FG . . . F 3 11.052 1.917 33.175 1 68.43 ? C21 7FG 601 B 1 HETATM 22 C C22 7FG . . . F 3 10.73 3.198 32.928 1 67.85 ? C22 7FG 601 B 1 HETATM 23 O O01 7FG . . . F 3 5.956 7.008 34.625 1 58.18 ? O01 7FG 601 B 1 # _model_server_stats.io_time_ms 78 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 23 #