data_5TMU # _model_server_result.job_id S9kI0pTTbJJQzUt2l_QhmQ _model_server_result.datetime_utc '2024-11-25 11:16:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tmu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TMU # _exptl.entry_id 5TMU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 294.387 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "4,4'-(cycloheptylidenemethylene)diphenol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.8 _cell.angle_gamma 90 _cell.entry_id 5TMU _cell.length_a 54.182 _cell.length_b 81.9 _cell.length_c 58.182 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TMU _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C20 H22 O2' _chem_comp.formula_weight 294.387 _chem_comp.id 7FL _chem_comp.mon_nstd_flag . _chem_comp.name "4,4'-(cycloheptylidenemethylene)diphenol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 7FL sing 1 n n C03 C02 7FL doub 2 n y C03 C04 7FL sing 3 n y C02 C22 7FL sing 4 n y C12 C13 7FL doub 5 n y C12 C10 7FL sing 6 n y C13 C07 7FL sing 7 n y C04 C05 7FL doub 8 n y O11 C10 7FL sing 9 n n C22 C21 7FL doub 10 n y C10 C09 7FL doub 11 n y C05 C21 7FL sing 12 n y C05 C06 7FL sing 13 n n C07 C06 7FL sing 14 n n C07 C08 7FL doub 15 n y C06 C14 7FL doub 16 n n C09 C08 7FL sing 17 n y C14 C15 7FL sing 18 n n C14 C20 7FL sing 19 n n C16 C15 7FL sing 20 n n C16 C17 7FL sing 21 n n C20 C19 7FL sing 22 n n C17 C18 7FL sing 23 n n C18 C19 7FL sing 24 n n O01 H1 7FL sing 25 n n C03 H2 7FL sing 26 n n C04 H3 7FL sing 27 n n C08 H5 7FL sing 28 n n C09 H6 7FL sing 29 n n O11 H7 7FL sing 30 n n C12 H8 7FL sing 31 n n C13 H9 7FL sing 32 n n C15 H11 7FL sing 33 n n C15 H12 7FL sing 34 n n C16 H13 7FL sing 35 n n C16 H14 7FL sing 36 n n C17 H15 7FL sing 37 n n C17 H16 7FL sing 38 n n C18 H17 7FL sing 39 n n C18 H18 7FL sing 40 n n C19 H19 7FL sing 41 n n C19 H20 7FL sing 42 n n C20 H21 7FL sing 43 n n C20 H22 7FL sing 44 n n C21 H23 7FL sing 45 n n C22 H24 7FL sing 46 n n # _atom_sites.entry_id 5TMU _atom_sites.fract_transf_matrix[1][1] 0.018456 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007011 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7FL A 1 601 1 7FL UNK . F 3 7FL B 1 601 2 7FL UNK . G 4 HOH A 1 701 37 HOH HOH . G 4 HOH A 2 702 4 HOH HOH . G 4 HOH A 3 703 27 HOH HOH . G 4 HOH A 4 704 8 HOH HOH . G 4 HOH A 5 705 24 HOH HOH . G 4 HOH A 6 706 23 HOH HOH . G 4 HOH A 7 707 45 HOH HOH . G 4 HOH A 8 708 1 HOH HOH . G 4 HOH A 9 709 5 HOH HOH . G 4 HOH A 10 710 20 HOH HOH . G 4 HOH A 11 711 2 HOH HOH . G 4 HOH A 12 712 28 HOH HOH . G 4 HOH A 13 713 49 HOH HOH . G 4 HOH A 14 714 22 HOH HOH . G 4 HOH A 15 715 50 HOH HOH . G 4 HOH A 16 716 46 HOH HOH . G 4 HOH A 17 717 34 HOH HOH . G 4 HOH A 18 718 42 HOH HOH . H 4 HOH B 1 701 19 HOH HOH . H 4 HOH B 2 702 54 HOH HOH . H 4 HOH B 3 703 33 HOH HOH . H 4 HOH B 4 704 25 HOH HOH . H 4 HOH B 5 705 35 HOH HOH . H 4 HOH B 6 706 41 HOH HOH . H 4 HOH B 7 707 30 HOH HOH . H 4 HOH B 8 708 53 HOH HOH . H 4 HOH B 9 709 17 HOH HOH . H 4 HOH B 10 710 15 HOH HOH . H 4 HOH B 11 711 40 HOH HOH . H 4 HOH B 12 712 12 HOH HOH . H 4 HOH B 13 713 29 HOH HOH . H 4 HOH B 14 714 38 HOH HOH . H 4 HOH B 15 715 11 HOH HOH . H 4 HOH B 16 716 10 HOH HOH . H 4 HOH B 17 717 3 HOH HOH . H 4 HOH B 18 718 26 HOH HOH . H 4 HOH B 19 719 13 HOH HOH . H 4 HOH B 20 720 43 HOH HOH . H 4 HOH B 21 721 52 HOH HOH . H 4 HOH B 22 722 18 HOH HOH . H 4 HOH B 23 723 14 HOH HOH . H 4 HOH B 24 724 39 HOH HOH . H 4 HOH B 25 725 7 HOH HOH . H 4 HOH B 26 726 9 HOH HOH . H 4 HOH B 27 727 36 HOH HOH . H 4 HOH B 28 728 32 HOH HOH . H 4 HOH B 29 729 48 HOH HOH . H 4 HOH B 30 730 47 HOH HOH . H 4 HOH B 31 731 6 HOH HOH . H 4 HOH B 32 732 44 HOH HOH . H 4 HOH B 33 733 21 HOH HOH . H 4 HOH B 34 734 31 HOH HOH . H 4 HOH B 35 735 55 HOH HOH . H 4 HOH B 36 736 51 HOH HOH . H 4 HOH B 37 737 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7FL . . . E 3 -6.959 -0.153 19.004 1 48.71 ? O01 7FL 601 A 1 HETATM 2 C C02 7FL . . . E 3 -6.395 0.949 19.671 1 45.39 ? C02 7FL 601 A 1 HETATM 3 C C03 7FL . . . E 3 -6.873 2.225 19.425 1 47.97 ? C03 7FL 601 A 1 HETATM 4 C C04 7FL . . . E 3 -6.315 3.311 20.082 1 47.6 ? C04 7FL 601 A 1 HETATM 5 C C05 7FL . . . E 3 -5.284 3.121 20.991 1 42.98 ? C05 7FL 601 A 1 HETATM 6 C C06 7FL . . . E 3 -4.667 4.303 21.707 1 41.16 ? C06 7FL 601 A 1 HETATM 7 C C07 7FL . . . E 3 -3.232 4.663 21.374 1 40.68 ? C07 7FL 601 A 1 HETATM 8 C C08 7FL . . . E 3 -2.3 4.889 22.376 1 38.07 ? C08 7FL 601 A 1 HETATM 9 C C09 7FL . . . E 3 -0.994 5.214 22.044 1 43.65 ? C09 7FL 601 A 1 HETATM 10 C C10 7FL . . . E 3 -0.612 5.3 20.715 1 44.73 ? C10 7FL 601 A 1 HETATM 11 O O11 7FL . . . E 3 0.716 5.625 20.383 1 44.76 ? O11 7FL 601 A 1 HETATM 12 C C12 7FL . . . E 3 -1.538 5.065 19.711 1 43.77 ? C12 7FL 601 A 1 HETATM 13 C C13 7FL . . . E 3 -2.845 4.745 20.044 1 45.75 ? C13 7FL 601 A 1 HETATM 14 C C14 7FL . . . E 3 -5.366 4.972 22.652 1 42.07 ? C14 7FL 601 A 1 HETATM 15 C C15 7FL . . . E 3 -5.245 6.479 22.763 1 47.01 ? C15 7FL 601 A 1 HETATM 16 C C16 7FL . . . E 3 -6.59 7.172 22.76 1 50.02 ? C16 7FL 601 A 1 HETATM 17 C C17 7FL . . . E 3 -7.187 7.305 24.142 1 47.64 ? C17 7FL 601 A 1 HETATM 18 C C18 7FL . . . E 3 -7.818 6.019 24.623 1 50.45 ? C18 7FL 601 A 1 HETATM 19 C C19 7FL . . . E 3 -6.822 4.886 24.707 1 52.17 ? C19 7FL 601 A 1 HETATM 20 C C20 7FL . . . E 3 -6.505 4.271 23.364 1 46.55 ? C20 7FL 601 A 1 HETATM 21 C C21 7FL . . . E 3 -4.804 1.844 21.231 1 38.99 ? C21 7FL 601 A 1 HETATM 22 C C22 7FL . . . E 3 -5.36 0.758 20.573 1 40.5 ? C22 7FL 601 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 22 #