data_5TN4 # _model_server_result.job_id YpzAMJlrPDgkzjvut_eEmQ _model_server_result.datetime_utc '2024-11-25 12:52:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tn4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 5TN4 # _exptl.entry_id 5TN4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.324 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S)-5-(4-hydroxy-3,5-dimethylphenyl)-2,3-dihydro-1H-inden-1-ol _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.86 _cell.angle_gamma 90 _cell.entry_id 5TN4 _cell.length_a 54.359 _cell.length_b 82.23 _cell.length_c 58.405 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TN4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C17 H18 O2' _chem_comp.formula_weight 254.324 _chem_comp.id 7FZ _chem_comp.mon_nstd_flag . _chem_comp.name (1S)-5-(4-hydroxy-3,5-dimethylphenyl)-2,3-dihydro-1H-inden-1-ol _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O13 C12 7FZ sing 1 n n C12 C11 7FZ sing 2 n n C12 C14 7FZ sing 3 n n C11 C10 7FZ sing 4 n n C14 C15 7FZ doub 5 n y C14 C09 7FZ sing 6 n y C15 C16 7FZ sing 7 n y C10 C09 7FZ sing 8 n n C09 C08 7FZ doub 9 n y C16 C07 7FZ doub 10 n y C08 C07 7FZ sing 11 n y C07 C06 7FZ sing 12 n n C05 C06 7FZ doub 13 n y C05 C03 7FZ sing 14 n y C06 C17 7FZ sing 15 n y C04 C03 7FZ sing 16 n n C03 C02 7FZ doub 17 n y C17 C18 7FZ doub 18 n y C02 C18 7FZ sing 19 n y C02 O01 7FZ sing 20 n n C18 C19 7FZ sing 21 n n O01 H1 7FZ sing 22 n n C04 H2 7FZ sing 23 n n C04 H3 7FZ sing 24 n n C04 H4 7FZ sing 25 n n C05 H5 7FZ sing 26 n n C08 H6 7FZ sing 27 n n C10 H7 7FZ sing 28 n n C10 H8 7FZ sing 29 n n C11 H9 7FZ sing 30 n n C11 H10 7FZ sing 31 n n C12 H11 7FZ sing 32 n n O13 H12 7FZ sing 33 n n C15 H13 7FZ sing 34 n n C16 H14 7FZ sing 35 n n C17 H15 7FZ sing 36 n n C19 H16 7FZ sing 37 n n C19 H17 7FZ sing 38 n n C19 H18 7FZ sing 39 n n # _atom_sites.entry_id 5TN4 _atom_sites.fract_transf_matrix[1][1] 0.018396 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00701 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012161 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018323 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7FZ A 1 601 1 7FZ UNK . F 3 7FZ B 1 601 2 7FZ UNK . G 4 HOH A 1 701 47 HOH HOH . G 4 HOH A 2 702 46 HOH HOH . G 4 HOH A 3 703 181 HOH HOH . G 4 HOH A 4 704 68 HOH HOH . G 4 HOH A 5 705 187 HOH HOH . G 4 HOH A 6 706 83 HOH HOH . G 4 HOH A 7 707 11 HOH HOH . G 4 HOH A 8 708 60 HOH HOH . G 4 HOH A 9 709 37 HOH HOH . G 4 HOH A 10 710 61 HOH HOH . G 4 HOH A 11 711 28 HOH HOH . G 4 HOH A 12 712 138 HOH HOH . G 4 HOH A 13 713 71 HOH HOH . G 4 HOH A 14 714 87 HOH HOH . G 4 HOH A 15 715 79 HOH HOH . G 4 HOH A 16 716 22 HOH HOH . G 4 HOH A 17 717 111 HOH HOH . G 4 HOH A 18 718 38 HOH HOH . G 4 HOH A 19 719 104 HOH HOH . G 4 HOH A 20 720 41 HOH HOH . G 4 HOH A 21 721 85 HOH HOH . G 4 HOH A 22 722 150 HOH HOH . G 4 HOH A 23 723 13 HOH HOH . G 4 HOH A 24 724 25 HOH HOH . G 4 HOH A 25 725 64 HOH HOH . G 4 HOH A 26 726 99 HOH HOH . G 4 HOH A 27 727 129 HOH HOH . G 4 HOH A 28 728 26 HOH HOH . G 4 HOH A 29 729 72 HOH HOH . G 4 HOH A 30 730 205 HOH HOH . G 4 HOH A 31 731 15 HOH HOH . G 4 HOH A 32 732 120 HOH HOH . G 4 HOH A 33 733 151 HOH HOH . G 4 HOH A 34 734 182 HOH HOH . G 4 HOH A 35 735 70 HOH HOH . G 4 HOH A 36 736 178 HOH HOH . G 4 HOH A 37 737 20 HOH HOH . G 4 HOH A 38 738 54 HOH HOH . G 4 HOH A 39 739 130 HOH HOH . G 4 HOH A 40 740 98 HOH HOH . G 4 HOH A 41 741 2 HOH HOH . G 4 HOH A 42 742 8 HOH HOH . G 4 HOH A 43 743 127 HOH HOH . G 4 HOH A 44 744 42 HOH HOH . G 4 HOH A 45 745 166 HOH HOH . G 4 HOH A 46 746 203 HOH HOH . G 4 HOH A 47 747 51 HOH HOH . G 4 HOH A 48 748 4 HOH HOH . G 4 HOH A 49 749 186 HOH HOH . G 4 HOH A 50 750 69 HOH HOH . G 4 HOH A 51 751 10 HOH HOH . G 4 HOH A 52 752 134 HOH HOH . G 4 HOH A 53 753 6 HOH HOH . G 4 HOH A 54 754 43 HOH HOH . G 4 HOH A 55 755 128 HOH HOH . G 4 HOH A 56 756 108 HOH HOH . G 4 HOH A 57 757 48 HOH HOH . G 4 HOH A 58 758 191 HOH HOH . G 4 HOH A 59 759 132 HOH HOH . G 4 HOH A 60 760 27 HOH HOH . G 4 HOH A 61 761 88 HOH HOH . G 4 HOH A 62 762 12 HOH HOH . G 4 HOH A 63 763 75 HOH HOH . G 4 HOH A 64 764 136 HOH HOH . G 4 HOH A 65 765 33 HOH HOH . G 4 HOH A 66 766 158 HOH HOH . G 4 HOH A 67 767 77 HOH HOH . G 4 HOH A 68 768 159 HOH HOH . G 4 HOH A 69 769 168 HOH HOH . G 4 HOH A 70 770 45 HOH HOH . G 4 HOH A 71 771 80 HOH HOH . G 4 HOH A 72 772 102 HOH HOH . G 4 HOH A 73 773 110 HOH HOH . G 4 HOH A 74 774 101 HOH HOH . G 4 HOH A 75 775 21 HOH HOH . G 4 HOH A 76 776 135 HOH HOH . G 4 HOH A 77 777 23 HOH HOH . G 4 HOH A 78 778 66 HOH HOH . G 4 HOH A 79 779 112 HOH HOH . G 4 HOH A 80 780 167 HOH HOH . G 4 HOH A 81 781 180 HOH HOH . G 4 HOH A 82 782 192 HOH HOH . G 4 HOH A 83 783 146 HOH HOH . G 4 HOH A 84 784 56 HOH HOH . G 4 HOH A 85 785 24 HOH HOH . G 4 HOH A 86 786 82 HOH HOH . G 4 HOH A 87 787 199 HOH HOH . G 4 HOH A 88 788 149 HOH HOH . G 4 HOH A 89 789 86 HOH HOH . G 4 HOH A 90 790 76 HOH HOH . G 4 HOH A 91 791 163 HOH HOH . G 4 HOH A 92 792 118 HOH HOH . G 4 HOH A 93 793 30 HOH HOH . G 4 HOH A 94 794 185 HOH HOH . G 4 HOH A 95 795 73 HOH HOH . G 4 HOH A 96 796 183 HOH HOH . G 4 HOH A 97 797 172 HOH HOH . G 4 HOH A 98 798 152 HOH HOH . G 4 HOH A 99 799 113 HOH HOH . G 4 HOH A 100 800 206 HOH HOH . G 4 HOH A 101 801 148 HOH HOH . G 4 HOH A 102 802 147 HOH HOH . G 4 HOH A 103 803 115 HOH HOH . G 4 HOH A 104 804 174 HOH HOH . G 4 HOH A 105 805 14 HOH HOH . G 4 HOH A 106 806 123 HOH HOH . G 4 HOH A 107 807 117 HOH HOH . G 4 HOH A 108 808 125 HOH HOH . H 4 HOH B 1 701 53 HOH HOH . H 4 HOH B 2 702 156 HOH HOH . H 4 HOH B 3 703 84 HOH HOH . H 4 HOH B 4 704 97 HOH HOH . H 4 HOH B 5 705 189 HOH HOH . H 4 HOH B 6 706 142 HOH HOH . H 4 HOH B 7 707 95 HOH HOH . H 4 HOH B 8 708 62 HOH HOH . H 4 HOH B 9 709 143 HOH HOH . H 4 HOH B 10 710 5 HOH HOH . H 4 HOH B 11 711 195 HOH HOH . H 4 HOH B 12 712 34 HOH HOH . H 4 HOH B 13 713 90 HOH HOH . H 4 HOH B 14 714 171 HOH HOH . H 4 HOH B 15 715 140 HOH HOH . H 4 HOH B 16 716 89 HOH HOH . H 4 HOH B 17 717 177 HOH HOH . H 4 HOH B 18 718 40 HOH HOH . H 4 HOH B 19 719 176 HOH HOH . H 4 HOH B 20 720 16 HOH HOH . H 4 HOH B 21 721 17 HOH HOH . H 4 HOH B 22 722 32 HOH HOH . H 4 HOH B 23 723 133 HOH HOH . H 4 HOH B 24 724 35 HOH HOH . H 4 HOH B 25 725 57 HOH HOH . H 4 HOH B 26 726 39 HOH HOH . H 4 HOH B 27 727 31 HOH HOH . H 4 HOH B 28 728 157 HOH HOH . H 4 HOH B 29 729 55 HOH HOH . H 4 HOH B 30 730 7 HOH HOH . H 4 HOH B 31 731 49 HOH HOH . H 4 HOH B 32 732 36 HOH HOH . H 4 HOH B 33 733 94 HOH HOH . H 4 HOH B 34 734 81 HOH HOH . H 4 HOH B 35 735 18 HOH HOH . H 4 HOH B 36 736 196 HOH HOH . H 4 HOH B 37 737 3 HOH HOH . H 4 HOH B 38 738 144 HOH HOH . H 4 HOH B 39 739 52 HOH HOH . H 4 HOH B 40 740 29 HOH HOH . H 4 HOH B 41 741 93 HOH HOH . H 4 HOH B 42 742 193 HOH HOH . H 4 HOH B 43 743 184 HOH HOH . H 4 HOH B 44 744 121 HOH HOH . H 4 HOH B 45 745 67 HOH HOH . H 4 HOH B 46 746 63 HOH HOH . H 4 HOH B 47 747 74 HOH HOH . H 4 HOH B 48 748 92 HOH HOH . H 4 HOH B 49 749 137 HOH HOH . H 4 HOH B 50 750 107 HOH HOH . H 4 HOH B 51 751 119 HOH HOH . H 4 HOH B 52 752 204 HOH HOH . H 4 HOH B 53 753 109 HOH HOH . H 4 HOH B 54 754 202 HOH HOH . H 4 HOH B 55 755 103 HOH HOH . H 4 HOH B 56 756 105 HOH HOH . H 4 HOH B 57 757 9 HOH HOH . H 4 HOH B 58 758 207 HOH HOH . H 4 HOH B 59 759 141 HOH HOH . H 4 HOH B 60 760 100 HOH HOH . H 4 HOH B 61 761 188 HOH HOH . H 4 HOH B 62 762 173 HOH HOH . H 4 HOH B 63 763 50 HOH HOH . H 4 HOH B 64 764 59 HOH HOH . H 4 HOH B 65 765 58 HOH HOH . H 4 HOH B 66 766 44 HOH HOH . H 4 HOH B 67 767 162 HOH HOH . H 4 HOH B 68 768 106 HOH HOH . H 4 HOH B 69 769 116 HOH HOH . H 4 HOH B 70 770 170 HOH HOH . H 4 HOH B 71 771 164 HOH HOH . H 4 HOH B 72 772 124 HOH HOH . H 4 HOH B 73 773 114 HOH HOH . H 4 HOH B 74 774 190 HOH HOH . H 4 HOH B 75 775 65 HOH HOH . H 4 HOH B 76 776 201 HOH HOH . H 4 HOH B 77 777 1 HOH HOH . H 4 HOH B 78 778 131 HOH HOH . H 4 HOH B 79 779 161 HOH HOH . H 4 HOH B 80 780 154 HOH HOH . H 4 HOH B 81 781 165 HOH HOH . H 4 HOH B 82 782 126 HOH HOH . H 4 HOH B 83 783 153 HOH HOH . H 4 HOH B 84 784 175 HOH HOH . H 4 HOH B 85 785 78 HOH HOH . H 4 HOH B 86 786 145 HOH HOH . H 4 HOH B 87 787 122 HOH HOH . H 4 HOH B 88 788 96 HOH HOH . H 4 HOH B 89 789 160 HOH HOH . H 4 HOH B 90 790 91 HOH HOH . H 4 HOH B 91 791 179 HOH HOH . H 4 HOH B 92 792 19 HOH HOH . I 4 HOH C 1 701 139 HOH HOH . I 4 HOH C 2 702 197 HOH HOH . I 4 HOH C 3 703 169 HOH HOH . J 4 HOH D 1 701 155 HOH HOH . J 4 HOH D 2 702 194 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7FZ . . . E 3 21.603 -4.102 8.8 1 61.32 ? O01 7FZ 601 A 1 HETATM 2 C C02 7FZ . . . E 3 20.832 -3.664 7.708 1 64.44 ? C02 7FZ 601 A 1 HETATM 3 C C03 7FZ . . . E 3 21.46 -3.5 6.493 1 72.02 ? C03 7FZ 601 A 1 HETATM 4 C C04 7FZ . . . E 3 22.936 -3.791 6.358 1 75.43 ? C04 7FZ 601 A 1 HETATM 5 C C05 7FZ . . . E 3 20.731 -3.069 5.403 1 68.43 ? C05 7FZ 601 A 1 HETATM 6 C C06 7FZ . . . E 3 19.377 -2.8 5.518 1 62.47 ? C06 7FZ 601 A 1 HETATM 7 C C07 7FZ . . . E 3 18.701 -2.341 4.253 1 55.78 ? C07 7FZ 601 A 1 HETATM 8 C C08 7FZ . . . E 3 17.366 -1.955 4.147 1 52.29 ? C08 7FZ 601 A 1 HETATM 9 C C09 7FZ . . . E 3 16.904 -1.555 2.871 1 56.23 ? C09 7FZ 601 A 1 HETATM 10 C C10 7FZ . . . E 3 15.545 -1.086 2.385 1 60.39 ? C10 7FZ 601 A 1 HETATM 11 C C11 7FZ . . . E 3 15.597 -1.075 0.872 1 58.61 ? C11 7FZ 601 A 1 HETATM 12 C C12 7FZ . . . E 3 17.053 -1.085 0.535 1 58.18 ? C12 7FZ 601 A 1 HETATM 13 O O13 7FZ . . . E 3 17.36 -1.958 -0.49 1 60.93 ? O13 7FZ 601 A 1 HETATM 14 C C14 7FZ . . . E 3 17.766 -1.553 1.793 1 55.36 ? C14 7FZ 601 A 1 HETATM 15 C C15 7FZ . . . E 3 19.094 -1.939 1.915 1 55.99 ? C15 7FZ 601 A 1 HETATM 16 C C16 7FZ . . . E 3 19.548 -2.328 3.148 1 55.76 ? C16 7FZ 601 A 1 HETATM 17 C C17 7FZ . . . E 3 18.734 -2.967 6.731 1 57.6 ? C17 7FZ 601 A 1 HETATM 18 C C18 7FZ . . . E 3 19.473 -3.398 7.825 1 59.91 ? C18 7FZ 601 A 1 HETATM 19 C C19 7FZ . . . E 3 18.793 -3.577 9.164 1 58.17 ? C19 7FZ 601 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 282 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #