data_5TN8 # _model_server_result.job_id FCaqcTJxBJomrNJk0rUx0w _model_server_result.datetime_utc '2024-10-12 11:11:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5tn8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":601}' # _entry.id 5TN8 # _exptl.entry_id 5TN8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.231 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "3-[(Z)-(hydroxyimino)methyl][1,1'-biphenyl]-4,4'-diol" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.77 _cell.angle_gamma 90 _cell.entry_id 5TN8 _cell.length_a 54.18 _cell.length_b 82.02 _cell.length_c 58.04 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TN8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 F N N # _chem_comp.formula 'C13 H11 N O3' _chem_comp.formula_weight 229.231 _chem_comp.id 7G3 _chem_comp.mon_nstd_flag . _chem_comp.name "3-[(Z)-(hydroxyimino)methyl][1,1'-biphenyl]-4,4'-diol" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 7G3 sing 1 n n C02 C03 7G3 doub 2 n y C02 C17 7G3 sing 3 n y C03 C04 7G3 sing 4 n y C17 C16 7G3 doub 5 n y C04 C05 7G3 doub 6 n y C16 C05 7G3 sing 7 n y C05 C06 7G3 sing 8 n n C06 C07 7G3 doub 9 n y C06 C15 7G3 sing 10 n y C07 C08 7G3 sing 11 n y C15 C14 7G3 doub 12 n y C08 C09 7G3 sing 13 n n C08 C12 7G3 doub 14 n y C09 N10 7G3 doub 15 z n C14 C12 7G3 sing 16 n y C12 O13 7G3 sing 17 n n N10 O11 7G3 sing 18 n n O01 H1 7G3 sing 19 n n C03 H2 7G3 sing 20 n n C04 H3 7G3 sing 21 n n C07 H4 7G3 sing 22 n n C09 H5 7G3 sing 23 n n O11 H6 7G3 sing 24 n n O13 H7 7G3 sing 25 n n C14 H8 7G3 sing 26 n n C15 H9 7G3 sing 27 n n C16 H10 7G3 sing 28 n n C17 H11 7G3 sing 29 n n # _atom_sites.entry_id 5TN8 _atom_sites.fract_transf_matrix[1][1] 0.018457 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012192 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018427 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 7G3 A 1 601 1 7G3 7G3 . F 3 7G3 B 1 601 2 7G3 7G3 . G 4 HOH A 1 701 51 HOH HOH . G 4 HOH A 2 702 2 HOH HOH . G 4 HOH A 3 703 1 HOH HOH . G 4 HOH A 4 704 57 HOH HOH . G 4 HOH A 5 705 55 HOH HOH . G 4 HOH A 6 706 8 HOH HOH . G 4 HOH A 7 707 13 HOH HOH . G 4 HOH A 8 708 44 HOH HOH . G 4 HOH A 9 709 10 HOH HOH . G 4 HOH A 10 710 26 HOH HOH . G 4 HOH A 11 711 11 HOH HOH . G 4 HOH A 12 712 45 HOH HOH . G 4 HOH A 13 713 6 HOH HOH . G 4 HOH A 14 714 19 HOH HOH . G 4 HOH A 15 715 43 HOH HOH . G 4 HOH A 16 716 4 HOH HOH . G 4 HOH A 17 717 48 HOH HOH . G 4 HOH A 18 718 14 HOH HOH . G 4 HOH A 19 719 22 HOH HOH . G 4 HOH A 20 720 33 HOH HOH . G 4 HOH A 21 721 56 HOH HOH . G 4 HOH A 22 722 47 HOH HOH . G 4 HOH A 23 723 36 HOH HOH . G 4 HOH A 24 724 21 HOH HOH . G 4 HOH A 25 725 29 HOH HOH . G 4 HOH A 26 726 38 HOH HOH . H 4 HOH B 1 701 46 HOH HOH . H 4 HOH B 2 702 28 HOH HOH . H 4 HOH B 3 703 41 HOH HOH . H 4 HOH B 4 704 34 HOH HOH . H 4 HOH B 5 705 37 HOH HOH . H 4 HOH B 6 706 7 HOH HOH . H 4 HOH B 7 707 17 HOH HOH . H 4 HOH B 8 708 31 HOH HOH . H 4 HOH B 9 709 3 HOH HOH . H 4 HOH B 10 710 52 HOH HOH . H 4 HOH B 11 711 12 HOH HOH . H 4 HOH B 12 712 15 HOH HOH . H 4 HOH B 13 713 54 HOH HOH . H 4 HOH B 14 714 49 HOH HOH . H 4 HOH B 15 715 32 HOH HOH . H 4 HOH B 16 716 35 HOH HOH . H 4 HOH B 17 717 23 HOH HOH . H 4 HOH B 18 718 42 HOH HOH . H 4 HOH B 19 719 5 HOH HOH . H 4 HOH B 20 720 39 HOH HOH . H 4 HOH B 21 721 24 HOH HOH . H 4 HOH B 22 722 50 HOH HOH . H 4 HOH B 23 723 27 HOH HOH . H 4 HOH B 24 724 30 HOH HOH . H 4 HOH B 25 725 25 HOH HOH . H 4 HOH B 26 726 18 HOH HOH . H 4 HOH B 27 727 9 HOH HOH . H 4 HOH B 28 728 53 HOH HOH . H 4 HOH B 29 729 20 HOH HOH . I 4 HOH C 1 701 16 HOH HOH . I 4 HOH C 2 702 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O01 7G3 . . . F 3 5.432 6.523 34.277 0.8 26.85 ? O01 7G3 601 B 1 HETATM 2 C C02 7G3 . . . F 3 6.731 6.452 33.802 0.8 26 ? C02 7G3 601 B 1 HETATM 3 C C03 7G3 . . . F 3 7.711 5.965 34.61 0.8 25.7 ? C03 7G3 601 B 1 HETATM 4 C C04 7G3 . . . F 3 9.007 5.898 34.137 0.8 25.74 ? C04 7G3 601 B 1 HETATM 5 C C05 7G3 . . . F 3 9.294 6.305 32.865 0.8 26.3 ? C05 7G3 601 B 1 HETATM 6 C C06 7G3 . . . F 3 10.675 6.284 32.333 0.8 27.77 ? C06 7G3 601 B 1 HETATM 7 C C07 7G3 . . . F 3 11.756 5.758 33.017 0.8 28.66 ? C07 7G3 601 B 1 HETATM 8 C C08 7G3 . . . F 3 13.015 5.798 32.44 0.8 29.67 ? C08 7G3 601 B 1 HETATM 9 C C09 7G3 . . . F 3 14.191 5.239 33.189 0.8 30.72 ? C09 7G3 601 B 1 HETATM 10 N N10 7G3 . . . F 3 15.073 4.493 32.722 0.8 31.2 1 N10 7G3 601 B 1 HETATM 11 O O11 7G3 . . . F 3 15.022 4.094 31.461 0.8 31.39 ? O11 7G3 601 B 1 HETATM 12 C C12 7G3 . . . F 3 13.206 6.376 31.24 0.8 29.7 ? C12 7G3 601 B 1 HETATM 13 O O13 7G3 . . . F 3 14.471 6.441 30.65 0.8 30.4 -1 O13 7G3 601 B 1 HETATM 14 C C14 7G3 . . . F 3 12.141 6.916 30.574 0.8 29.06 ? C14 7G3 601 B 1 HETATM 15 C C15 7G3 . . . F 3 10.896 6.876 31.131 0.8 28.54 ? C15 7G3 601 B 1 HETATM 16 C C16 7G3 . . . F 3 8.315 6.791 32.076 0.8 25.98 ? C16 7G3 601 B 1 HETATM 17 C C17 7G3 . . . F 3 7.012 6.864 32.546 0.8 25.73 ? C17 7G3 601 B 1 # _model_server_stats.io_time_ms 71 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 17 #