data_5TO2 # _model_server_result.job_id D-gYZpkreUKhEai25IZGeQ _model_server_result.datetime_utc '2025-01-15 05:00:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 5to2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 5TO2 # _exptl.entry_id 5TO2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 87.54 _cell.angle_beta 85.89 _cell.angle_gamma 67.99 _cell.entry_id 5TO2 _cell.length_a 44.357 _cell.length_b 56.738 _cell.length_c 57.435 _cell.Z_PDB 3 _cell.pdbx_unique_axis ? # _symmetry.entry_id 5TO2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 205 n n C1 C2 PEG sing 206 n n C1 H11 PEG sing 207 n n C1 H12 PEG sing 208 n n O1 HO1 PEG sing 209 n n C2 O2 PEG sing 210 n n C2 H21 PEG sing 211 n n C2 H22 PEG sing 212 n n O2 C3 PEG sing 213 n n C3 C4 PEG sing 214 n n C3 H31 PEG sing 215 n n C3 H32 PEG sing 216 n n C4 O4 PEG sing 217 n n C4 H41 PEG sing 218 n n C4 H42 PEG sing 219 n n O4 HO4 PEG sing 220 n n # _atom_sites.entry_id 5TO2 _atom_sites.fract_transf_matrix[1][1] 0.022545 _atom_sites.fract_transf_matrix[1][2] -0.009114 _atom_sites.fract_transf_matrix[1][3] -0.00146 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01901 _atom_sites.fract_transf_matrix[2][3] -0.000332 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017458 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 PEG D 1 201 1 PEG PEG . F 4 HOH A 1 201 196 HOH HOH . F 4 HOH A 2 202 135 HOH HOH . F 4 HOH A 3 203 21 HOH HOH . F 4 HOH A 4 204 32 HOH HOH . F 4 HOH A 5 205 47 HOH HOH . F 4 HOH A 6 206 67 HOH HOH . F 4 HOH A 7 207 178 HOH HOH . F 4 HOH A 8 208 108 HOH HOH . F 4 HOH A 9 209 53 HOH HOH . F 4 HOH A 10 210 61 HOH HOH . F 4 HOH A 11 211 75 HOH HOH . F 4 HOH A 12 212 6 HOH HOH . F 4 HOH A 13 213 92 HOH HOH . F 4 HOH A 14 214 184 HOH HOH . F 4 HOH A 15 215 105 HOH HOH . F 4 HOH A 16 216 49 HOH HOH . F 4 HOH A 17 217 8 HOH HOH . F 4 HOH A 18 218 220 HOH HOH . F 4 HOH A 19 219 200 HOH HOH . F 4 HOH A 20 220 15 HOH HOH . F 4 HOH A 21 221 236 HOH HOH . F 4 HOH A 22 222 240 HOH HOH . F 4 HOH A 23 223 57 HOH HOH . F 4 HOH A 24 224 225 HOH HOH . F 4 HOH A 25 225 217 HOH HOH . F 4 HOH A 26 226 48 HOH HOH . F 4 HOH A 27 227 147 HOH HOH . F 4 HOH A 28 228 97 HOH HOH . F 4 HOH A 29 229 109 HOH HOH . F 4 HOH A 30 230 129 HOH HOH . F 4 HOH A 31 231 229 HOH HOH . F 4 HOH A 32 232 247 HOH HOH . F 4 HOH A 33 233 227 HOH HOH . F 4 HOH A 34 234 44 HOH HOH . F 4 HOH A 35 235 170 HOH HOH . F 4 HOH A 36 236 103 HOH HOH . F 4 HOH A 37 237 133 HOH HOH . F 4 HOH A 38 238 177 HOH HOH . F 4 HOH A 39 239 141 HOH HOH . F 4 HOH A 40 240 193 HOH HOH . F 4 HOH A 41 241 266 HOH HOH . F 4 HOH A 42 242 160 HOH HOH . F 4 HOH A 43 243 294 HOH HOH . F 4 HOH A 44 244 280 HOH HOH . F 4 HOH A 45 245 80 HOH HOH . F 4 HOH A 46 246 50 HOH HOH . F 4 HOH A 47 247 244 HOH HOH . F 4 HOH A 48 248 219 HOH HOH . F 4 HOH A 49 249 230 HOH HOH . F 4 HOH A 50 250 262 HOH HOH . F 4 HOH A 51 251 89 HOH HOH . F 4 HOH A 52 252 120 HOH HOH . F 4 HOH A 53 253 267 HOH HOH . F 4 HOH A 54 254 287 HOH HOH . F 4 HOH A 55 255 130 HOH HOH . F 4 HOH A 56 256 226 HOH HOH . F 4 HOH A 57 257 232 HOH HOH . F 4 HOH A 58 258 187 HOH HOH . F 4 HOH A 59 259 303 HOH HOH . F 4 HOH A 60 260 152 HOH HOH . F 4 HOH A 61 261 302 HOH HOH . F 4 HOH A 62 262 300 HOH HOH . G 4 HOH B 1 201 215 HOH HOH . G 4 HOH B 2 202 201 HOH HOH . G 4 HOH B 3 203 72 HOH HOH . G 4 HOH B 4 204 64 HOH HOH . G 4 HOH B 5 205 23 HOH HOH . G 4 HOH B 6 206 94 HOH HOH . G 4 HOH B 7 207 60 HOH HOH . G 4 HOH B 8 208 40 HOH HOH . G 4 HOH B 9 209 102 HOH HOH . G 4 HOH B 10 210 288 HOH HOH . G 4 HOH B 11 211 55 HOH HOH . G 4 HOH B 12 212 88 HOH HOH . G 4 HOH B 13 213 211 HOH HOH . G 4 HOH B 14 214 11 HOH HOH . G 4 HOH B 15 215 276 HOH HOH . G 4 HOH B 16 216 58 HOH HOH . G 4 HOH B 17 217 291 HOH HOH . G 4 HOH B 18 218 204 HOH HOH . G 4 HOH B 19 219 254 HOH HOH . G 4 HOH B 20 220 218 HOH HOH . G 4 HOH B 21 221 150 HOH HOH . G 4 HOH B 22 222 41 HOH HOH . G 4 HOH B 23 223 84 HOH HOH . G 4 HOH B 24 224 30 HOH HOH . G 4 HOH B 25 225 91 HOH HOH . G 4 HOH B 26 226 29 HOH HOH . G 4 HOH B 27 227 268 HOH HOH . G 4 HOH B 28 228 43 HOH HOH . G 4 HOH B 29 229 71 HOH HOH . G 4 HOH B 30 230 104 HOH HOH . G 4 HOH B 31 231 54 HOH HOH . G 4 HOH B 32 232 186 HOH HOH . G 4 HOH B 33 233 98 HOH HOH . G 4 HOH B 34 234 122 HOH HOH . G 4 HOH B 35 235 265 HOH HOH . G 4 HOH B 36 236 113 HOH HOH . G 4 HOH B 37 237 199 HOH HOH . G 4 HOH B 38 238 205 HOH HOH . G 4 HOH B 39 239 86 HOH HOH . G 4 HOH B 40 240 289 HOH HOH . G 4 HOH B 41 241 118 HOH HOH . G 4 HOH B 42 242 179 HOH HOH . G 4 HOH B 43 243 210 HOH HOH . G 4 HOH B 44 244 165 HOH HOH . G 4 HOH B 45 245 134 HOH HOH . G 4 HOH B 46 246 149 HOH HOH . G 4 HOH B 47 247 278 HOH HOH . G 4 HOH B 48 248 256 HOH HOH . G 4 HOH B 49 249 137 HOH HOH . G 4 HOH B 50 250 59 HOH HOH . G 4 HOH B 51 251 271 HOH HOH . G 4 HOH B 52 252 139 HOH HOH . G 4 HOH B 53 253 173 HOH HOH . G 4 HOH B 54 254 28 HOH HOH . G 4 HOH B 55 255 253 HOH HOH . G 4 HOH B 56 256 5 HOH HOH . G 4 HOH B 57 257 194 HOH HOH . G 4 HOH B 58 258 123 HOH HOH . G 4 HOH B 59 259 209 HOH HOH . G 4 HOH B 60 260 191 HOH HOH . G 4 HOH B 61 261 258 HOH HOH . G 4 HOH B 62 262 238 HOH HOH . G 4 HOH B 63 263 83 HOH HOH . G 4 HOH B 64 264 176 HOH HOH . G 4 HOH B 65 265 145 HOH HOH . G 4 HOH B 66 266 158 HOH HOH . G 4 HOH B 67 267 299 HOH HOH . H 4 HOH C 1 201 185 HOH HOH . H 4 HOH C 2 202 207 HOH HOH . H 4 HOH C 3 203 56 HOH HOH . H 4 HOH C 4 204 286 HOH HOH . H 4 HOH C 5 205 189 HOH HOH . H 4 HOH C 6 206 36 HOH HOH . H 4 HOH C 7 207 35 HOH HOH . H 4 HOH C 8 208 121 HOH HOH . H 4 HOH C 9 209 87 HOH HOH . H 4 HOH C 10 210 27 HOH HOH . H 4 HOH C 11 211 46 HOH HOH . H 4 HOH C 12 212 106 HOH HOH . H 4 HOH C 13 213 237 HOH HOH . H 4 HOH C 14 214 17 HOH HOH . H 4 HOH C 15 215 107 HOH HOH . H 4 HOH C 16 216 188 HOH HOH . H 4 HOH C 17 217 2 HOH HOH . H 4 HOH C 18 218 39 HOH HOH . H 4 HOH C 19 219 18 HOH HOH . H 4 HOH C 20 220 255 HOH HOH . H 4 HOH C 21 221 45 HOH HOH . H 4 HOH C 22 222 12 HOH HOH . H 4 HOH C 23 223 114 HOH HOH . H 4 HOH C 24 224 25 HOH HOH . H 4 HOH C 25 225 140 HOH HOH . H 4 HOH C 26 226 221 HOH HOH . H 4 HOH C 27 227 223 HOH HOH . H 4 HOH C 28 228 69 HOH HOH . H 4 HOH C 29 229 20 HOH HOH . H 4 HOH C 30 230 214 HOH HOH . H 4 HOH C 31 231 13 HOH HOH . H 4 HOH C 32 232 115 HOH HOH . H 4 HOH C 33 233 34 HOH HOH . H 4 HOH C 34 234 274 HOH HOH . H 4 HOH C 35 235 182 HOH HOH . H 4 HOH C 36 236 66 HOH HOH . H 4 HOH C 37 237 81 HOH HOH . H 4 HOH C 38 238 65 HOH HOH . H 4 HOH C 39 239 85 HOH HOH . H 4 HOH C 40 240 90 HOH HOH . H 4 HOH C 41 241 125 HOH HOH . H 4 HOH C 42 242 127 HOH HOH . H 4 HOH C 43 243 82 HOH HOH . H 4 HOH C 44 244 116 HOH HOH . H 4 HOH C 45 245 148 HOH HOH . H 4 HOH C 46 246 222 HOH HOH . H 4 HOH C 47 247 203 HOH HOH . H 4 HOH C 48 248 62 HOH HOH . H 4 HOH C 49 249 212 HOH HOH . H 4 HOH C 50 250 142 HOH HOH . H 4 HOH C 51 251 68 HOH HOH . H 4 HOH C 52 252 181 HOH HOH . H 4 HOH C 53 253 162 HOH HOH . H 4 HOH C 54 254 166 HOH HOH . H 4 HOH C 55 255 99 HOH HOH . H 4 HOH C 56 256 257 HOH HOH . H 4 HOH C 57 257 132 HOH HOH . H 4 HOH C 58 258 37 HOH HOH . H 4 HOH C 59 259 38 HOH HOH . H 4 HOH C 60 260 153 HOH HOH . H 4 HOH C 61 261 4 HOH HOH . H 4 HOH C 62 262 231 HOH HOH . H 4 HOH C 63 263 3 HOH HOH . H 4 HOH C 64 264 7 HOH HOH . H 4 HOH C 65 265 14 HOH HOH . H 4 HOH C 66 266 22 HOH HOH . H 4 HOH C 67 267 195 HOH HOH . H 4 HOH C 68 268 174 HOH HOH . H 4 HOH C 69 269 190 HOH HOH . H 4 HOH C 70 270 52 HOH HOH . H 4 HOH C 71 271 136 HOH HOH . H 4 HOH C 72 272 245 HOH HOH . H 4 HOH C 73 273 163 HOH HOH . H 4 HOH C 74 274 305 HOH HOH . H 4 HOH C 75 275 79 HOH HOH . I 4 HOH D 1 301 117 HOH HOH . I 4 HOH D 2 302 249 HOH HOH . I 4 HOH D 3 303 172 HOH HOH . I 4 HOH D 4 304 110 HOH HOH . I 4 HOH D 5 305 128 HOH HOH . I 4 HOH D 6 306 151 HOH HOH . I 4 HOH D 7 307 198 HOH HOH . I 4 HOH D 8 308 19 HOH HOH . I 4 HOH D 9 309 77 HOH HOH . I 4 HOH D 10 310 76 HOH HOH . I 4 HOH D 11 311 124 HOH HOH . I 4 HOH D 12 312 273 HOH HOH . I 4 HOH D 13 313 206 HOH HOH . I 4 HOH D 14 314 131 HOH HOH . I 4 HOH D 15 315 157 HOH HOH . I 4 HOH D 16 316 9 HOH HOH . I 4 HOH D 17 317 126 HOH HOH . I 4 HOH D 18 318 284 HOH HOH . I 4 HOH D 19 319 234 HOH HOH . I 4 HOH D 20 320 96 HOH HOH . I 4 HOH D 21 321 101 HOH HOH . I 4 HOH D 22 322 31 HOH HOH . I 4 HOH D 23 323 224 HOH HOH . I 4 HOH D 24 324 112 HOH HOH . I 4 HOH D 25 325 16 HOH HOH . I 4 HOH D 26 326 290 HOH HOH . I 4 HOH D 27 327 42 HOH HOH . I 4 HOH D 28 328 95 HOH HOH . I 4 HOH D 29 329 33 HOH HOH . I 4 HOH D 30 330 100 HOH HOH . I 4 HOH D 31 331 161 HOH HOH . I 4 HOH D 32 332 260 HOH HOH . I 4 HOH D 33 333 154 HOH HOH . I 4 HOH D 34 334 26 HOH HOH . I 4 HOH D 35 335 233 HOH HOH . I 4 HOH D 36 336 74 HOH HOH . I 4 HOH D 37 337 275 HOH HOH . I 4 HOH D 38 338 167 HOH HOH . I 4 HOH D 39 339 70 HOH HOH . I 4 HOH D 40 340 155 HOH HOH . I 4 HOH D 41 341 24 HOH HOH . I 4 HOH D 42 342 202 HOH HOH . I 4 HOH D 43 343 180 HOH HOH . I 4 HOH D 44 344 78 HOH HOH . I 4 HOH D 45 345 164 HOH HOH . I 4 HOH D 46 346 51 HOH HOH . I 4 HOH D 47 347 63 HOH HOH . I 4 HOH D 48 348 171 HOH HOH . I 4 HOH D 49 349 93 HOH HOH . I 4 HOH D 50 350 10 HOH HOH . I 4 HOH D 51 351 119 HOH HOH . I 4 HOH D 52 352 213 HOH HOH . I 4 HOH D 53 353 175 HOH HOH . I 4 HOH D 54 354 252 HOH HOH . I 4 HOH D 55 355 138 HOH HOH . I 4 HOH D 56 356 143 HOH HOH . I 4 HOH D 57 357 73 HOH HOH . I 4 HOH D 58 358 111 HOH HOH . I 4 HOH D 59 359 1 HOH HOH . I 4 HOH D 60 360 269 HOH HOH . I 4 HOH D 61 361 297 HOH HOH . I 4 HOH D 62 362 263 HOH HOH . I 4 HOH D 63 363 168 HOH HOH . I 4 HOH D 64 364 146 HOH HOH . I 4 HOH D 65 365 228 HOH HOH . I 4 HOH D 66 366 270 HOH HOH . I 4 HOH D 67 367 169 HOH HOH . I 4 HOH D 68 368 183 HOH HOH . I 4 HOH D 69 369 277 HOH HOH . I 4 HOH D 70 370 279 HOH HOH . I 4 HOH D 71 371 192 HOH HOH . I 4 HOH D 72 372 197 HOH HOH . I 4 HOH D 73 373 156 HOH HOH . I 4 HOH D 74 374 304 HOH HOH . I 4 HOH D 75 375 235 HOH HOH . I 4 HOH D 76 376 159 HOH HOH . I 4 HOH D 77 377 301 HOH HOH . I 4 HOH D 78 378 144 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 3 -8.169 -15.639 -2.898 1 48.06 ? C1 PEG 201 D 1 HETATM 2 O O1 PEG . . . E 3 -7.02 -15.448 -2.154 1 47.56 ? O1 PEG 201 D 1 HETATM 3 C C2 PEG . . . E 3 -8.977 -14.434 -3.249 1 49.79 ? C2 PEG 201 D 1 HETATM 4 O O2 PEG . . . E 3 -10.32 -14.451 -2.946 1 50.83 ? O2 PEG 201 D 1 HETATM 5 C C3 PEG . . . E 3 -10.883 -13.472 -2.145 1 52.85 ? C3 PEG 201 D 1 HETATM 6 C C4 PEG . . . E 3 -11.34 -13.836 -0.765 1 50.65 ? C4 PEG 201 D 1 HETATM 7 O O4 PEG . . . E 3 -12.677 -13.714 -0.434 1 54.44 ? O4 PEG 201 D 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 209 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #